RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CHIC2Q9UKJ5 165 aa23.72■■□□□ 1.39
CCNDBP1-203ENST00000562553 KIF15Q9NS87 1388 aa23.72■■□□□ 1.39
CCNDBP1-203ENST00000562553 RNF17Q9BXT8 1623 aaKnown RBP23.72■■□□□ 1.39
CCNDBP1-203ENST00000562553 ZMYM3Q14202 1370 aa23.69■■□□□ 1.38
CCNDBP1-203ENST00000562553 RRP7BPQ9NSQ0 103 aa23.69■■□□□ 1.38
CCNDBP1-203ENST00000562553 UHRF1BP1Q6BDS2 1440 aa23.68■■□□□ 1.38
CCNDBP1-203ENST00000562553 MROH1Q8NDA8 1641 aa23.68■■□□□ 1.38
CCNDBP1-203ENST00000562553 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
CCNDBP1-203ENST00000562553 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
CCNDBP1-203ENST00000562553 KDM5DQ9BY66 1539 aa23.67■■□□□ 1.38
CCNDBP1-203ENST00000562553 PTPRKQ15262 1439 aa23.67■■□□□ 1.38
CCNDBP1-203ENST00000562553 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
CCNDBP1-203ENST00000562553 NCOA1Q15788 1441 aa23.66■■□□□ 1.38
CCNDBP1-203ENST00000562553 STRCQ7RTU9 1775 aa23.65■■□□□ 1.38
CCNDBP1-203ENST00000562553 FAM135AQ9P2D6 1515 aa23.65■■□□□ 1.38
CCNDBP1-203ENST00000562553 ERBINQ96RT1 1412 aa23.65■■□□□ 1.38
CCNDBP1-203ENST00000562553 DMRT2Q9Y5R5 561 aa23.61■■□□□ 1.37
CCNDBP1-203ENST00000562553 CEP152O94986 1710 aa23.61■■□□□ 1.37
CCNDBP1-203ENST00000562553 NPATQ14207 1427 aa23.6■■□□□ 1.37
CCNDBP1-203ENST00000562553 ABCC3O15438 1527 aa23.6■■□□□ 1.37
CCNDBP1-203ENST00000562553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.37
CCNDBP1-203ENST00000562553 ZC3H13Q5T200 1668 aaKnown RBP23.6■■□□□ 1.37
CCNDBP1-203ENST00000562553 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
CCNDBP1-203ENST00000562553 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
CCNDBP1-203ENST00000562553 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
CCNDBP1-203ENST00000562553 PRDM15P57071 1507 aaPredicted RBP23.59■■□□□ 1.37
CCNDBP1-203ENST00000562553 CERKQ8TCT0 537 aa23.56■■□□□ 1.36
CCNDBP1-203ENST00000562553 PZPP20742 1482 aa23.56■■□□□ 1.36
CCNDBP1-203ENST00000562553 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
CCNDBP1-203ENST00000562553 ITGAEP38570 1179 aa23.55■■□□□ 1.36
CCNDBP1-203ENST00000562553 CAMSAP1Q5T5Y3 1602 aa23.54■■□□□ 1.36
CCNDBP1-203ENST00000562553 PTPRTO14522 1441 aa23.52■■□□□ 1.36
CCNDBP1-203ENST00000562553 FBXO31Q5XUX0 539 aaPredicted RBP23.52■■□□□ 1.36
CCNDBP1-203ENST00000562553 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
CCNDBP1-203ENST00000562553 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
CCNDBP1-203ENST00000562553 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
CCNDBP1-203ENST00000562553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.355e-7■■□□□ 12.8
CCNDBP1-203ENST00000562553 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
CCNDBP1-203ENST00000562553 VWDEQ8N2E2 1590 aa23.49■■□□□ 1.35
CCNDBP1-203ENST00000562553 CEP170BQ9Y4F5 1589 aaPredicted RBP23.48■■□□□ 1.35
CCNDBP1-203ENST00000562553 TNRQ92752 1358 aa23.47■■□□□ 1.35
CCNDBP1-203ENST00000562553 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
CCNDBP1-203ENST00000562553 KANK1Q14678 1352 aa23.44■■□□□ 1.34
CCNDBP1-203ENST00000562553 LMTK2Q8IWU2 1503 aa23.43■■□□□ 1.34
CCNDBP1-203ENST00000562553 ERVK-7P63135 1459 aa23.43■■□□□ 1.34
CCNDBP1-203ENST00000562553 UNC13BO14795 1591 aa23.43■■□□□ 1.34
CCNDBP1-203ENST00000562553 A2ML1A8K2U0 1454 aa23.42■■□□□ 1.34
CCNDBP1-203ENST00000562553 ARHGAP31Q2M1Z3 1444 aa23.41■■□□□ 1.34
CCNDBP1-203ENST00000562553 EFCAB6Q5THR3 1501 aa23.38■■□□□ 1.33
CCNDBP1-203ENST00000562553 PLA2R1Q13018 1463 aa23.37■■□□□ 1.33
CCNDBP1-203ENST00000562553 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
CCNDBP1-203ENST00000562553 LTBP4Q8N2S1 1624 aa23.36■■□□□ 1.33
CCNDBP1-203ENST00000562553 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
CCNDBP1-203ENST00000562553 TET3O43151 1660 aa23.35■■□□□ 1.33
CCNDBP1-203ENST00000562553 PKD2Q13563 968 aa23.34■■□□□ 1.33
CCNDBP1-203ENST00000562553 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
CCNDBP1-203ENST00000562553 NAIPQ13075 1403 aa23.33■■□□□ 1.32
CCNDBP1-203ENST00000562553 IQSEC2Q5JU85 1478 aa23.31■■□□□ 1.32
CCNDBP1-203ENST00000562553 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
CCNDBP1-203ENST00000562553 NCKAP5LQ9HCH0 1330 aa23.31■■□□□ 1.32
CCNDBP1-203ENST00000562553 SYNMO15061 1565 aa23.3■■□□□ 1.32
CCNDBP1-203ENST00000562553 UBR1Q8IWV7 1749 aa23.28■■□□□ 1.32
CCNDBP1-203ENST00000562553 HFM1A2PYH4 1435 aa23.28■■□□□ 1.32
CCNDBP1-203ENST00000562553 E9PCH4 1651 aa23.28■■□□□ 1.32
CCNDBP1-203ENST00000562553 NOS1P29475 1434 aa23.27■■□□□ 1.32
CCNDBP1-203ENST00000562553 POLR1AO95602 1720 aaPredicted RBP23.27■■□□□ 1.32
CCNDBP1-203ENST00000562553 NUP155O75694 1391 aa23.27■■□□□ 1.31
CCNDBP1-203ENST00000562553 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
CCNDBP1-203ENST00000562553 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
CCNDBP1-203ENST00000562553 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
CCNDBP1-203ENST00000562553 THEMISQ8N1K5 641 aaPredicted RBP23.21■■□□□ 1.31
CCNDBP1-203ENST00000562553 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
CCNDBP1-203ENST00000562553 IDI1Q13907 227 aa23.18■■□□□ 1.3
CCNDBP1-203ENST00000562553 KDM5AP29375 1690 aaKnown RBP23.16■■□□□ 1.3
CCNDBP1-203ENST00000562553 MYO5BQ9ULV0 1848 aa23.15■■□□□ 1.3
CCNDBP1-203ENST00000562553 ADGRB3O60242 1522 aa23.15■■□□□ 1.3
CCNDBP1-203ENST00000562553 ARHGAP23Q9P227 1491 aa23.14■■□□□ 1.29
CCNDBP1-203ENST00000562553 ANKLE2Q86XL3 938 aa23.14■■□□□ 1.29
CCNDBP1-203ENST00000562553 SLIT1O75093 1534 aa23.13■■□□□ 1.29
CCNDBP1-203ENST00000562553 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
CCNDBP1-203ENST00000562553 MED14O60244 1454 aa23.11■■□□□ 1.29
CCNDBP1-203ENST00000562553 SLC52A1Q9NWF4 448 aa23.11■■□□□ 1.29
CCNDBP1-203ENST00000562553 IQGAP1P46940 1657 aa23.11■■□□□ 1.29
CCNDBP1-203ENST00000562553 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
CCNDBP1-203ENST00000562553 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
CCNDBP1-203ENST00000562553 STAG3Q9UJ98 1225 aa23.1■■□□□ 1.29
CCNDBP1-203ENST00000562553 SCAF11Q99590 1463 aaKnown RBP23.09■■□□□ 1.29
CCNDBP1-203ENST00000562553 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
CCNDBP1-203ENST00000562553 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
CCNDBP1-203ENST00000562553 LTKP29376 864 aa23.07■■□□□ 1.28
CCNDBP1-203ENST00000562553 CPS1P31327 1500 aa23.05■■□□□ 1.28
CCNDBP1-203ENST00000562553 TXNDC2Q86VQ3 553 aa23.04■■□□□ 1.28
CCNDBP1-203ENST00000562553 SETD5Q9C0A6 1442 aa23.04■■□□□ 1.28
CCNDBP1-203ENST00000562553 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.28
CCNDBP1-203ENST00000562553 TRPM2O94759 1503 aa23.02■■□□□ 1.28
CCNDBP1-203ENST00000562553 CLTCL1P53675 1640 aa23.01■■□□□ 1.27
CCNDBP1-203ENST00000562553 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
CCNDBP1-203ENST00000562553 CHGAP10645 457 aaKnown RBP23■■□□□ 1.27
CCNDBP1-203ENST00000562553 EID1Q9Y6B2 187 aa23■■□□□ 1.27
CCNDBP1-203ENST00000562553 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms