RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 SETD1BQ9UPS6 1966 aaKnown RBP29.83■■■□□ 2.37
TMEM249-202ENST00000562477 PREX1Q8TCU6 1659 aa29.82■■■□□ 2.36
TMEM249-202ENST00000562477 UHRF1BP1Q6BDS2 1440 aa29.81■■■□□ 2.36
TMEM249-202ENST00000562477 PTPRKQ15262 1439 aa29.79■■■□□ 2.36
TMEM249-202ENST00000562477 RNF17Q9BXT8 1623 aaKnown RBP29.78■■■□□ 2.36
TMEM249-202ENST00000562477 ANKRD30AQ9BXX3 1397 aa29.78■■■□□ 2.36
TMEM249-202ENST00000562477 WASHC2CQ9Y4E1 1318 aa29.78■■■□□ 2.36
TMEM249-202ENST00000562477 KDM5DQ9BY66 1539 aa29.78■■■□□ 2.36
TMEM249-202ENST00000562477 NPATQ14207 1427 aa29.78■■■□□ 2.36
TMEM249-202ENST00000562477 EIF2AK4Q9P2K8 1649 aaKnown RBP29.77■■■□□ 2.36
TMEM249-202ENST00000562477 NCOA1Q15788 1441 aa29.77■■■□□ 2.36
TMEM249-202ENST00000562477 MROH1Q8NDA8 1641 aa29.74■■■□□ 2.35
TMEM249-202ENST00000562477 ERBINQ96RT1 1412 aa29.74■■■□□ 2.35
TMEM249-202ENST00000562477 ADGRL2O95490 1459 aa29.74■■■□□ 2.35
TMEM249-202ENST00000562477 FAM135AQ9P2D6 1515 aa29.72■■■□□ 2.35
TMEM249-202ENST00000562477 FBXO31Q5XUX0 539 aaPredicted RBP29.72■■■□□ 2.35
TMEM249-202ENST00000562477 ABCC3O15438 1527 aa29.71■■■□□ 2.35
TMEM249-202ENST00000562477 PZPP20742 1482 aa29.68■■■□□ 2.34
TMEM249-202ENST00000562477 ITGAEP38570 1179 aa29.67■■■□□ 2.34
TMEM249-202ENST00000562477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.66■■■□□ 2.34
TMEM249-202ENST00000562477 MYO3AQ8NEV4 1616 aa29.63■■■□□ 2.33
TMEM249-202ENST00000562477 PRDM15P57071 1507 aaPredicted RBP29.62■■■□□ 2.33
TMEM249-202ENST00000562477 TNRQ92752 1358 aa29.62■■■□□ 2.33
TMEM249-202ENST00000562477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.62■■■□□ 2.33
TMEM249-202ENST00000562477 CEP152O94986 1710 aa29.61■■■□□ 2.33
TMEM249-202ENST00000562477 RRBP1Q9P2E9 1410 aaKnown RBP29.6■■■□□ 2.33
TMEM249-202ENST00000562477 ZC3H13Q5T200 1668 aaKnown RBP29.6■■■□□ 2.33
TMEM249-202ENST00000562477 ANKRD50Q9ULJ7 1429 aa29.59■■■□□ 2.33
TMEM249-202ENST00000562477 DEPDC5O75140 1603 aa29.59■■■□□ 2.33
TMEM249-202ENST00000562477 STRCQ7RTU9 1775 aa29.57■■■□□ 2.32
TMEM249-202ENST00000562477 CEP170BQ9Y4F5 1589 aaPredicted RBP29.56■■■□□ 2.32
TMEM249-202ENST00000562477 ROCK1Q13464 1354 aa29.56■■■□□ 2.32
TMEM249-202ENST00000562477 CAMSAP1Q5T5Y3 1602 aa29.55■■■□□ 2.32
TMEM249-202ENST00000562477 ZNF142P52746 1687 aaPredicted RBP29.54■■■□□ 2.32
TMEM249-202ENST00000562477 KANK1Q14678 1352 aa29.53■■■□□ 2.32
TMEM249-202ENST00000562477 A2ML1A8K2U0 1454 aa29.53■■■□□ 2.32
TMEM249-202ENST00000562477 ERVK-7P63135 1459 aa29.52■■■□□ 2.32
TMEM249-202ENST00000562477 VWDEQ8N2E2 1590 aa29.51■■■□□ 2.31
TMEM249-202ENST00000562477 SPATA31D1Q6ZQQ2 1576 aa29.49■■■□□ 2.31
TMEM249-202ENST00000562477 CFAP65Q6ZU64 1925 aaKnown RBP29.49■■■□□ 2.31
TMEM249-202ENST00000562477 NCKAP5LQ9HCH0 1330 aa29.47■■■□□ 2.31
TMEM249-202ENST00000562477 ARHGAP31Q2M1Z3 1444 aa29.47■■■□□ 2.31
TMEM249-202ENST00000562477 LMTK2Q8IWU2 1503 aa29.45■■■□□ 2.31
TMEM249-202ENST00000562477 NLRP1Q9C000 1473 aa29.44■■■□□ 2.3
TMEM249-202ENST00000562477 DMRT2Q9Y5R5 561 aa29.42■■■□□ 2.3
TMEM249-202ENST00000562477 PLA2R1Q13018 1463 aa29.42■■■□□ 2.3
TMEM249-202ENST00000562477 PTPRTO14522 1441 aa29.4■■■□□ 2.3
TMEM249-202ENST00000562477 EFCAB6Q5THR3 1501 aa29.38■■■□□ 2.29
TMEM249-202ENST00000562477 UNC13BO14795 1591 aa29.38■■■□□ 2.29
TMEM249-202ENST00000562477 UGGT1Q9NYU2 1555 aa29.37■■■□□ 2.29
TMEM249-202ENST00000562477 PKD2Q13563 968 aa29.35■■■□□ 2.29
TMEM249-202ENST00000562477 THEMISQ8N1K5 641 aaPredicted RBP29.33■■■□□ 2.29
TMEM249-202ENST00000562477 NAIPQ13075 1403 aa29.31■■■□□ 2.28
TMEM249-202ENST00000562477 NUP155O75694 1391 aa29.3■■■□□ 2.28
TMEM249-202ENST00000562477 NOS1P29475 1434 aa29.29■■■□□ 2.28
TMEM249-202ENST00000562477 TET3O43151 1660 aa29.29■■■□□ 2.28
TMEM249-202ENST00000562477 ILDR1Q86SU0 546 aaPredicted RBP29.29■■■□□ 2.28
TMEM249-202ENST00000562477 SYNMO15061 1565 aa29.29■■■□□ 2.28
TMEM249-202ENST00000562477 IDI1Q13907 227 aa29.26■■■□□ 2.27
TMEM249-202ENST00000562477 NEURL4Q96JN8 1562 aa29.26■■■□□ 2.27
TMEM249-202ENST00000562477 IQGAP3Q86VI3 1631 aa29.25■■■□□ 2.27
TMEM249-202ENST00000562477 ANKLE2Q86XL3 938 aa29.25■■■□□ 2.27
TMEM249-202ENST00000562477 RPRD2Q5VT52 1461 aaKnown RBP29.24■■■□□ 2.27
TMEM249-202ENST00000562477 UBR1Q8IWV7 1749 aa29.24■■■□□ 2.27
TMEM249-202ENST00000562477 HFM1A2PYH4 1435 aa29.23■■■□□ 2.27
TMEM249-202ENST00000562477 CERKQ8TCT0 537 aa29.23■■■□□ 2.27
TMEM249-202ENST00000562477 PIK3C2BO00750 1634 aa29.23■■■□□ 2.27
TMEM249-202ENST00000562477 GCC2Q8IWJ2 1684 aa29.22■■■□□ 2.27
TMEM249-202ENST00000562477 POLR1AO95602 1720 aaPredicted RBP29.21■■■□□ 2.27
TMEM249-202ENST00000562477 ZNF335Q9H4Z2 1342 aaPredicted RBP29.2■■■□□ 2.26
TMEM249-202ENST00000562477 E9PCH4 1651 aa29.19■■■□□ 2.26
TMEM249-202ENST00000562477 STAG3Q9UJ98 1225 aa29.18■■■□□ 2.26
TMEM249-202ENST00000562477 LTBP4Q8N2S1 1624 aa29.17■■■□□ 2.26
TMEM249-202ENST00000562477 NPHP4O75161 1426 aaPredicted RBP29.16■■■□□ 2.26
TMEM249-202ENST00000562477 LTKP29376 864 aa29.15■■■□□ 2.26
TMEM249-202ENST00000562477 SLC52A1Q9NWF4 448 aa29.15■■■□□ 2.26
TMEM249-202ENST00000562477 ARHGAP23Q9P227 1491 aa29.15■■■□□ 2.26
TMEM249-202ENST00000562477 FBXO41Q8TF61 875 aa29.14■■■□□ 2.26
TMEM249-202ENST00000562477 MED14O60244 1454 aa29.14■■■□□ 2.26
TMEM249-202ENST00000562477 SLIT1O75093 1534 aa29.13■■■□□ 2.25
TMEM249-202ENST00000562477 TXNDC2Q86VQ3 553 aa29.12■■■□□ 2.25
TMEM249-202ENST00000562477 TMEM2Q9UHN6 1383 aa29.12■■■□□ 2.25
TMEM249-202ENST00000562477 SCAF11Q99590 1463 aaKnown RBP29.11■■■□□ 2.25
TMEM249-202ENST00000562477 ADGRB3O60242 1522 aa29.11■■■□□ 2.25
TMEM249-202ENST00000562477 TRIM52Q96A61 297 aa29.1■■■□□ 2.25
TMEM249-202ENST00000562477 IQGAP1P46940 1657 aa29.07■■■□□ 2.24
TMEM249-202ENST00000562477 EID1Q9Y6B2 187 aa29.06■■■□□ 2.24
TMEM249-202ENST00000562477 KDM5AP29375 1690 aaKnown RBP29.05■■■□□ 2.24
TMEM249-202ENST00000562477 CHGAP10645 457 aaKnown RBP29.04■■■□□ 2.24
TMEM249-202ENST00000562477 TMEM131LA2VDJ0 1609 aa29.01■■■□□ 2.23
TMEM249-202ENST00000562477 MYO5BQ9ULV0 1848 aa29.01■■■□□ 2.23
TMEM249-202ENST00000562477 SLC4A1APQ9BWU0 796 aaKnown RBP28.97■■■□□ 2.23
TMEM249-202ENST00000562477 SENP3Q9H4L4 574 aaPredicted RBP28.97■■■□□ 2.23
TMEM249-202ENST00000562477 SPHKAPQ2M3C7 1700 aa28.97■■■□□ 2.23
TMEM249-202ENST00000562477 ZFYVE9O95405 1425 aa28.96■■■□□ 2.23
TMEM249-202ENST00000562477 RIMS2Q9UQ26 1411 aa28.95■■■□□ 2.23
TMEM249-202ENST00000562477 SETD5Q9C0A6 1442 aa28.93■■■□□ 2.22
TMEM249-202ENST00000562477 NUTM2DQ5VT03 806 aaPredicted RBP28.92■■■□□ 2.22
TMEM249-202ENST00000562477 FOXD1Q16676 465 aa28.91■■■□□ 2.22
TMEM249-202ENST00000562477 IQSEC2Q5JU85 1478 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms