RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
NSMCE1-203ENST00000562039 TCOF1Q13428 1488 aaKnown RBP14.65□□□□□ -0.06
NSMCE1-203ENST00000562039 KIF15Q9NS87 1388 aa14.65□□□□□ -0.06
NSMCE1-203ENST00000562039 CROCC2H7BZ55 1655 aa14.65□□□□□ -0.06
NSMCE1-203ENST00000562039 DNMT1P26358 1616 aaKnown RBP14.64□□□□□ -0.07
NSMCE1-203ENST00000562039 ITGAEP38570 1179 aa14.64□□□□□ -0.07
NSMCE1-203ENST00000562039 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
NSMCE1-203ENST00000562039 KDM5DQ9BY66 1539 aa14.64□□□□□ -0.07
NSMCE1-203ENST00000562039 STRCQ7RTU9 1775 aa14.64□□□□□ -0.07
NSMCE1-203ENST00000562039 NPATQ14207 1427 aa14.64□□□□□ -0.07
NSMCE1-203ENST00000562039 NCKAP5LQ9HCH0 1330 aa14.64□□□□□ -0.07
NSMCE1-203ENST00000562039 MYO3AQ8NEV4 1616 aa14.63□□□□□ -0.07
NSMCE1-203ENST00000562039 CAMSAP1Q5T5Y3 1602 aa14.62□□□□□ -0.07
NSMCE1-203ENST00000562039 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
NSMCE1-203ENST00000562039 SHANK2Q9UPX8 1470 aa14.61□□□□□ -0.07
NSMCE1-203ENST00000562039 CFAP65Q6ZU64 1925 aaKnown RBP14.6□□□□□ -0.07
NSMCE1-203ENST00000562039 TNRQ92752 1358 aa14.6□□□□□ -0.07
NSMCE1-203ENST00000562039 CEP152O94986 1710 aa14.6□□□□□ -0.07
NSMCE1-203ENST00000562039 ANKRD30AQ9BXX3 1397 aa14.6□□□□□ -0.07
NSMCE1-203ENST00000562039 ABCC3O15438 1527 aa14.59□□□□□ -0.07
NSMCE1-203ENST00000562039 CEP170BQ9Y4F5 1589 aaPredicted RBP14.59□□□□□ -0.07
NSMCE1-203ENST00000562039 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
NSMCE1-203ENST00000562039 RNF17Q9BXT8 1623 aaKnown RBP14.59□□□□□ -0.07
NSMCE1-203ENST00000562039 NCOA1Q15788 1441 aa14.58□□□□□ -0.07
NSMCE1-203ENST00000562039 PZPP20742 1482 aa14.58□□□□□ -0.08
NSMCE1-203ENST00000562039 EIF2AK4Q9P2K8 1649 aaKnown RBP14.57□□□□□ -0.08
NSMCE1-203ENST00000562039 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
NSMCE1-203ENST00000562039 CERKQ8TCT0 537 aa14.56□□□□□ -0.08
NSMCE1-203ENST00000562039 ERBINQ96RT1 1412 aa14.56□□□□□ -0.08
NSMCE1-203ENST00000562039 A2ML1A8K2U0 1454 aa14.55□□□□□ -0.08
NSMCE1-203ENST00000562039 ZNF142P52746 1687 aaPredicted RBP14.55□□□□□ -0.08
NSMCE1-203ENST00000562039 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
NSMCE1-203ENST00000562039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
NSMCE1-203ENST00000562039 PTPRTO14522 1441 aa14.52□□□□□ -0.08
NSMCE1-203ENST00000562039 ZC3H13Q5T200 1668 aaKnown RBP14.52□□□□□ -0.09
NSMCE1-203ENST00000562039 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
NSMCE1-203ENST00000562039 ERVK-7P63135 1459 aa14.51□□□□□ -0.09
NSMCE1-203ENST00000562039 KANK1Q14678 1352 aa14.51□□□□□ -0.09
NSMCE1-203ENST00000562039 ZNF335Q9H4Z2 1342 aaPredicted RBP14.51□□□□□ -0.09
NSMCE1-203ENST00000562039 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
NSMCE1-203ENST00000562039 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
NSMCE1-203ENST00000562039 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
NSMCE1-203ENST00000562039 PKD2Q13563 968 aa14.49□□□□□ -0.09
NSMCE1-203ENST00000562039 SPATA31D1Q6ZQQ2 1576 aa14.48□□□□□ -0.09
NSMCE1-203ENST00000562039 UGGT1Q9NYU2 1555 aa14.48□□□□□ -0.09
NSMCE1-203ENST00000562039 PLA2R1Q13018 1463 aa14.48□□□□□ -0.09
NSMCE1-203ENST00000562039 DEPDC5O75140 1603 aa14.48□□□□□ -0.09
NSMCE1-203ENST00000562039 THEMISQ8N1K5 641 aaPredicted RBP14.47□□□□□ -0.09
NSMCE1-203ENST00000562039 SENP3Q9H4L4 574 aaPredicted RBP14.47□□□□□ -0.09
NSMCE1-203ENST00000562039 NLRP1Q9C000 1473 aa14.46□□□□□ -0.09
NSMCE1-203ENST00000562039 ANKLE2Q86XL3 938 aa14.46□□□□□ -0.09
NSMCE1-203ENST00000562039 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
NSMCE1-203ENST00000562039 LTBP4Q8N2S1 1624 aa14.44□□□□□ -0.1
NSMCE1-203ENST00000562039 NEURL4Q96JN8 1562 aa14.43□□□□□ -0.1
NSMCE1-203ENST00000562039 POLR1AO95602 1720 aaPredicted RBP14.43□□□□□ -0.1
NSMCE1-203ENST00000562039 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
NSMCE1-203ENST00000562039 VWDEQ8N2E2 1590 aa14.42□□□□□ -0.1
NSMCE1-203ENST00000562039 IDI1Q13907 227 aa14.41□□□□□ -0.1
NSMCE1-203ENST00000562039 ROCK1Q13464 1354 aa14.41□□□□□ -0.1
NSMCE1-203ENST00000562039 PIK3C2BO00750 1634 aa14.41□□□□□ -0.1
NSMCE1-203ENST00000562039 LMTK2Q8IWU2 1503 aa14.41□□□□□ -0.1
NSMCE1-203ENST00000562039 NPHP4O75161 1426 aaPredicted RBP14.41□□□□□ -0.1
NSMCE1-203ENST00000562039 LTKP29376 864 aa14.4□□□□□ -0.1
NSMCE1-203ENST00000562039 TXNDC2Q86VQ3 553 aa14.4□□□□□ -0.1
NSMCE1-203ENST00000562039 UBR1Q8IWV7 1749 aa14.4□□□□□ -0.1
NSMCE1-203ENST00000562039 EFCAB6Q5THR3 1501 aa14.4□□□□□ -0.1
NSMCE1-203ENST00000562039 SYNMO15061 1565 aa14.39□□□□□ -0.11
NSMCE1-203ENST00000562039 CHGAP10645 457 aaKnown RBP14.39□□□□□ -0.11
NSMCE1-203ENST00000562039 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
NSMCE1-203ENST00000562039 NUP155O75694 1391 aa14.38□□□□□ -0.11
NSMCE1-203ENST00000562039 UNC13BO14795 1591 aa14.37□□□□□ -0.11
NSMCE1-203ENST00000562039 NOS1P29475 1434 aa14.36□□□□□ -0.11
NSMCE1-203ENST00000562039 UBAP1LF5GYI3 381 aa14.35□□□□□ -0.11
NSMCE1-203ENST00000562039 NUTM2DQ5VT03 806 aaPredicted RBP14.35□□□□□ -0.11
NSMCE1-203ENST00000562039 SCAF11Q99590 1463 aaKnown RBP14.35□□□□□ -0.11
NSMCE1-203ENST00000562039 TET3O43151 1660 aa14.35□□□□□ -0.11
NSMCE1-203ENST00000562039 IQGAP1P46940 1657 aa14.35□□□□□ -0.11
NSMCE1-203ENST00000562039 BCANQ96GW7 911 aa14.34□□□□□ -0.11
NSMCE1-203ENST00000562039 EID1Q9Y6B2 187 aa14.34□□□□□ -0.11
NSMCE1-203ENST00000562039 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
NSMCE1-203ENST00000562039 MED14O60244 1454 aa14.33□□□□□ -0.12
NSMCE1-203ENST00000562039 TMEM2Q9UHN6 1383 aa14.33□□□□□ -0.12
NSMCE1-203ENST00000562039 E9PCH4 1651 aa14.33□□□□□ -0.12
NSMCE1-203ENST00000562039 TRIM52Q96A61 297 aa14.32□□□□□ -0.12
NSMCE1-203ENST00000562039 GCC2Q8IWJ2 1684 aa14.32□□□□□ -0.12
NSMCE1-203ENST00000562039 ARHGAP23Q9P227 1491 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 IQGAP3Q86VI3 1631 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 PIP4K2BP78356 416 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 SLC26A8Q96RN1 970 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 MYO5BQ9ULV0 1848 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 NAIPQ13075 1403 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 ADGRB3O60242 1522 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 SLIT1O75093 1534 aa14.31□□□□□ -0.12
NSMCE1-203ENST00000562039 SLC52A1Q9NWF4 448 aa14.3□□□□□ -0.12
NSMCE1-203ENST00000562039 RPRD2Q5VT52 1461 aaKnown RBP14.3□□□□□ -0.12
NSMCE1-203ENST00000562039 STRCP1A6NGW2 1772 aa14.29□□□□□ -0.12
NSMCE1-203ENST00000562039 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
NSMCE1-203ENST00000562039 PPP1R15AO75807 674 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-203ENST00000562039 CPS1P31327 1500 aa14.26□□□□□ -0.13
NSMCE1-203ENST00000562039 RIMS2Q9UQ26 1411 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms