RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 DIP2CQ9Y2E4 1556 aa16.86■□□□□ 0.29
PCAT1-202ENST00000561978 INO80Q9ULG1 1556 aaPredicted RBP16.86■□□□□ 0.29
PCAT1-202ENST00000561978 SIGLEC1Q9BZZ2 1709 aa16.86■□□□□ 0.29
PCAT1-202ENST00000561978 ATP10AO60312 1499 aa16.85■□□□□ 0.29
PCAT1-202ENST00000561978 ABCC5O15440 1437 aa16.84■□□□□ 0.29
PCAT1-202ENST00000561978 DAPK1P53355 1430 aa16.84■□□□□ 0.29
PCAT1-202ENST00000561978 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
PCAT1-202ENST00000561978 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.29
PCAT1-202ENST00000561978 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
PCAT1-202ENST00000561978 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
PCAT1-202ENST00000561978 CROCC2H7BZ55 1655 aa16.81■□□□□ 0.28
PCAT1-202ENST00000561978 MLECQ14165 292 aa16.81■□□□□ 0.28
PCAT1-202ENST00000561978 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
PCAT1-202ENST00000561978 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
PCAT1-202ENST00000561978 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
PCAT1-202ENST00000561978 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
PCAT1-202ENST00000561978 MAST1Q9Y2H9 1570 aa16.78■□□□□ 0.28
PCAT1-202ENST00000561978 PTPRKQ15262 1439 aa16.77■□□□□ 0.28
PCAT1-202ENST00000561978 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
PCAT1-202ENST00000561978 A2MP01023 1474 aa16.77■□□□□ 0.27
PCAT1-202ENST00000561978 SHANK2Q9UPX8 1470 aa16.77■□□□□ 0.27
PCAT1-202ENST00000561978 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
PCAT1-202ENST00000561978 BCORL1Q5H9F3 1711 aa16.74■□□□□ 0.27
PCAT1-202ENST00000561978 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
PCAT1-202ENST00000561978 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
PCAT1-202ENST00000561978 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
PCAT1-202ENST00000561978 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
PCAT1-202ENST00000561978 KIF15Q9NS87 1388 aa16.73■□□□□ 0.27
PCAT1-202ENST00000561978 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
PCAT1-202ENST00000561978 NCOA1Q15788 1441 aa16.72■□□□□ 0.27
PCAT1-202ENST00000561978 GGT6Q6P531 493 aa16.71■□□□□ 0.27
PCAT1-202ENST00000561978 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.27
PCAT1-202ENST00000561978 KIF3BO15066 747 aa16.71■□□□□ 0.27
PCAT1-202ENST00000561978 AGLP35573 1532 aa16.7■□□□□ 0.26
PCAT1-202ENST00000561978 NAIPQ13075 1403 aa16.7■□□□□ 0.26
PCAT1-202ENST00000561978 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
PCAT1-202ENST00000561978 ADAMTSL3P82987 1691 aa16.69■□□□□ 0.26
PCAT1-202ENST00000561978 DAXXQ9UER7 740 aaPredicted RBP16.69■□□□□ 0.26
PCAT1-202ENST00000561978 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
PCAT1-202ENST00000561978 DUOX2Q9NRD8 1548 aa16.68■□□□□ 0.26
PCAT1-202ENST00000561978 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
PCAT1-202ENST00000561978 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
PCAT1-202ENST00000561978 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
PCAT1-202ENST00000561978 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
PCAT1-202ENST00000561978 SIN3AQ96ST3 1273 aa16.64■□□□□ 0.25
PCAT1-202ENST00000561978 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
PCAT1-202ENST00000561978 ERBINQ96RT1 1412 aa16.64■□□□□ 0.25
PCAT1-202ENST00000561978 ESF1Q9H501 851 aaKnown RBP16.63■□□□□ 0.25
PCAT1-202ENST00000561978 ANKRD50Q9ULJ7 1429 aa16.62■□□□□ 0.25
PCAT1-202ENST00000561978 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
PCAT1-202ENST00000561978 PTPRMP28827 1452 aa16.61■□□□□ 0.25
PCAT1-202ENST00000561978 MIER1Q8N108 512 aa16.61■□□□□ 0.25
PCAT1-202ENST00000561978 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
PCAT1-202ENST00000561978 CEBPAP49715 358 aaPredicted RBP16.6■□□□□ 0.25
PCAT1-202ENST00000561978 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
PCAT1-202ENST00000561978 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.25
PCAT1-202ENST00000561978 RNF17Q9BXT8 1623 aaKnown RBP16.58■□□□□ 0.24
PCAT1-202ENST00000561978 MROH1Q8NDA8 1641 aa16.57■□□□□ 0.24
PCAT1-202ENST00000561978 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
PCAT1-202ENST00000561978 TONSLQ96HA7 1378 aa16.56■□□□□ 0.24
PCAT1-202ENST00000561978 ZMYM3Q14202 1370 aa16.55■□□□□ 0.24
PCAT1-202ENST00000561978 DEPDC5O75140 1603 aa16.54■□□□□ 0.24
PCAT1-202ENST00000561978 KDM5DQ9BY66 1539 aa16.54■□□□□ 0.24
PCAT1-202ENST00000561978 CNTLNQ9NXG0 1405 aa16.54■□□□□ 0.24
PCAT1-202ENST00000561978 C3P01024 1663 aa16.54■□□□□ 0.24
PCAT1-202ENST00000561978 PRDM15P57071 1507 aaPredicted RBP16.53■□□□□ 0.24
PCAT1-202ENST00000561978 CEP152O94986 1710 aa16.53■□□□□ 0.24
PCAT1-202ENST00000561978 TRIM52Q96A61 297 aa16.53■□□□□ 0.24
PCAT1-202ENST00000561978 CFAP65Q6ZU64 1925 aaKnown RBP16.52■□□□□ 0.23
PCAT1-202ENST00000561978 ABCC3O15438 1527 aa16.52■□□□□ 0.23
PCAT1-202ENST00000561978 MROH2AA6NES4 1674 aa16.51■□□□□ 0.23
PCAT1-202ENST00000561978 KANK1Q14678 1352 aa16.5■□□□□ 0.23
PCAT1-202ENST00000561978 ZC3H13Q5T200 1668 aaKnown RBP16.48■□□□□ 0.23
PCAT1-202ENST00000561978 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
PCAT1-202ENST00000561978 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
PCAT1-202ENST00000561978 NUP155O75694 1391 aa16.48■□□□□ 0.23
PCAT1-202ENST00000561978 UNC13BO14795 1591 aa16.48■□□□□ 0.23
PCAT1-202ENST00000561978 FAM135AQ9P2D6 1515 aa16.47■□□□□ 0.23
PCAT1-202ENST00000561978 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
PCAT1-202ENST00000561978 CAMSAP1Q5T5Y3 1602 aa16.47■□□□□ 0.23
PCAT1-202ENST00000561978 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
PCAT1-202ENST00000561978 SETD1BQ9UPS6 1966 aaKnown RBP16.45■□□□□ 0.22
PCAT1-202ENST00000561978 PZPP20742 1482 aa16.44■□□□□ 0.22
PCAT1-202ENST00000561978 NPATQ14207 1427 aa16.43■□□□□ 0.22
PCAT1-202ENST00000561978 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
PCAT1-202ENST00000561978 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
PCAT1-202ENST00000561978 IQGAP3Q86VI3 1631 aa16.42■□□□□ 0.22
PCAT1-202ENST00000561978 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
PCAT1-202ENST00000561978 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
PCAT1-202ENST00000561978 TET3O43151 1660 aa16.39■□□□□ 0.21
PCAT1-202ENST00000561978 ARHGAP31Q2M1Z3 1444 aa16.39■□□□□ 0.21
PCAT1-202ENST00000561978 PREX1Q8TCU6 1659 aa16.38■□□□□ 0.21
PCAT1-202ENST00000561978 LMTK3Q96Q04 1460 aa16.38■□□□□ 0.21
PCAT1-202ENST00000561978 E9PCH4 1651 aa16.37■□□□□ 0.21
PCAT1-202ENST00000561978 ERVK-7P63135 1459 aa16.37■□□□□ 0.21
PCAT1-202ENST00000561978 TNRQ92752 1358 aa16.37■□□□□ 0.21
PCAT1-202ENST00000561978 HSPA2P54652 639 aa16.37■□□□□ 0.21
PCAT1-202ENST00000561978 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
PCAT1-202ENST00000561978 ANKRD30BQ9BXX2 1392 aa16.37■□□□□ 0.21
PCAT1-202ENST00000561978 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms