RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 NEURL4Q96JN8 1562 aa18.89■□□□□ 0.62
NSMCE1-202ENST00000561960 A2ML1A8K2U0 1454 aa18.88■□□□□ 0.61
NSMCE1-202ENST00000561960 KIF3BO15066 747 aa18.87■□□□□ 0.61
NSMCE1-202ENST00000561960 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
NSMCE1-202ENST00000561960 PKD2Q13563 968 aa18.86■□□□□ 0.61
NSMCE1-202ENST00000561960 TNRQ92752 1358 aa18.84■□□□□ 0.61
NSMCE1-202ENST00000561960 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
NSMCE1-202ENST00000561960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.83■□□□□ 0.61
NSMCE1-202ENST00000561960 NCOA2Q15596 1464 aa18.83■□□□□ 0.6
NSMCE1-202ENST00000561960 CCDC141Q6ZP82 1450 aa18.83■□□□□ 0.6
NSMCE1-202ENST00000561960 DHX29Q7Z478 1369 aaKnown RBP18.82■□□□□ 0.6
NSMCE1-202ENST00000561960 HSPA1LP34931 641 aa18.82■□□□□ 0.6
NSMCE1-202ENST00000561960 STRCP1A6NGW2 1772 aa18.82■□□□□ 0.6
NSMCE1-202ENST00000561960 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
NSMCE1-202ENST00000561960 CEP152O94986 1710 aa18.81■□□□□ 0.6
NSMCE1-202ENST00000561960 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
NSMCE1-202ENST00000561960 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
NSMCE1-202ENST00000561960 PZPP20742 1482 aa18.79■□□□□ 0.6
NSMCE1-202ENST00000561960 VWDEQ8N2E2 1590 aa18.78■□□□□ 0.6
NSMCE1-202ENST00000561960 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
NSMCE1-202ENST00000561960 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.6
NSMCE1-202ENST00000561960 IQGAP1P46940 1657 aa18.77■□□□□ 0.6
NSMCE1-202ENST00000561960 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
NSMCE1-202ENST00000561960 ALKQ9UM73 1620 aa18.75■□□□□ 0.59
NSMCE1-202ENST00000561960 CPS1P31327 1500 aa18.73■□□□□ 0.59
NSMCE1-202ENST00000561960 NPHP4O75161 1426 aaPredicted RBP18.72■□□□□ 0.59
NSMCE1-202ENST00000561960 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
NSMCE1-202ENST00000561960 RNF17Q9BXT8 1623 aaKnown RBP18.71■□□□□ 0.59
NSMCE1-202ENST00000561960 ANKLE2Q86XL3 938 aa18.71■□□□□ 0.59
NSMCE1-202ENST00000561960 MIA2Q96PC5 1412 aa18.71■□□□□ 0.59
NSMCE1-202ENST00000561960 ABCC3O15438 1527 aa18.7■□□□□ 0.58
NSMCE1-202ENST00000561960 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
NSMCE1-202ENST00000561960 DEPDC5O75140 1603 aa18.69■□□□□ 0.58
NSMCE1-202ENST00000561960 MROH1Q8NDA8 1641 aa18.69■□□□□ 0.58
NSMCE1-202ENST00000561960 UBR1Q8IWV7 1749 aa18.69■□□□□ 0.58
NSMCE1-202ENST00000561960 TOM1O60784 492 aa18.68■□□□□ 0.58
NSMCE1-202ENST00000561960 ZC3H13Q5T200 1668 aaKnown RBP18.68■□□□□ 0.58
NSMCE1-202ENST00000561960 NLRP1Q9C000 1473 aa18.67■□□□□ 0.58
NSMCE1-202ENST00000561960 XIRP1Q702N8 1843 aaKnown RBP18.67■□□□□ 0.58
NSMCE1-202ENST00000561960 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
NSMCE1-202ENST00000561960 THEMISQ8N1K5 641 aaPredicted RBP18.66■□□□□ 0.58
NSMCE1-202ENST00000561960 TSPY4P0CV99 314 aa18.65■□□□□ 0.58
NSMCE1-202ENST00000561960 TSPY10P0CW01 314 aa18.65■□□□□ 0.58
NSMCE1-202ENST00000561960 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
NSMCE1-202ENST00000561960 LRRC9Q6ZRR7 1453 aa18.65■□□□□ 0.58
NSMCE1-202ENST00000561960 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
NSMCE1-202ENST00000561960 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.57
NSMCE1-202ENST00000561960 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
NSMCE1-202ENST00000561960 MED14O60244 1454 aa18.63■□□□□ 0.57
NSMCE1-202ENST00000561960 MAST1Q9Y2H9 1570 aa18.63■□□□□ 0.57
NSMCE1-202ENST00000561960 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
NSMCE1-202ENST00000561960 CROCC2H7BZ55 1655 aa18.61■□□□□ 0.57
NSMCE1-202ENST00000561960 SYNMO15061 1565 aa18.6■□□□□ 0.57
NSMCE1-202ENST00000561960 PIK3C2BO00750 1634 aa18.59■□□□□ 0.57
NSMCE1-202ENST00000561960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
NSMCE1-202ENST00000561960 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
NSMCE1-202ENST00000561960 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
NSMCE1-202ENST00000561960 LTKP29376 864 aa18.56■□□□□ 0.56
NSMCE1-202ENST00000561960 SCAF11Q99590 1463 aaKnown RBP18.55■□□□□ 0.56
NSMCE1-202ENST00000561960 RBM33Q96EV2 1170 aaKnown RBP18.55■□□□□ 0.56
NSMCE1-202ENST00000561960 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
NSMCE1-202ENST00000561960 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
NSMCE1-202ENST00000561960 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
NSMCE1-202ENST00000561960 PTPN23Q9H3S7 1636 aa18.52■□□□□ 0.56
NSMCE1-202ENST00000561960 TXNDC2Q86VQ3 553 aa18.52■□□□□ 0.56
NSMCE1-202ENST00000561960 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
NSMCE1-202ENST00000561960 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
NSMCE1-202ENST00000561960 MYO5BQ9ULV0 1848 aa18.51■□□□□ 0.55
NSMCE1-202ENST00000561960 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
NSMCE1-202ENST00000561960 ABCC5O15440 1437 aa18.48■□□□□ 0.55
NSMCE1-202ENST00000561960 ARHGAP23Q9P227 1491 aa18.47■□□□□ 0.55
NSMCE1-202ENST00000561960 SLIT1O75093 1534 aa18.47■□□□□ 0.55
NSMCE1-202ENST00000561960 ROBO1Q9Y6N7 1651 aa18.46■□□□□ 0.55
NSMCE1-202ENST00000561960 SETD1AO15047 1707 aaKnown RBP18.46■□□□□ 0.55
NSMCE1-202ENST00000561960 RGS17Q9UGC6 210 aaPredicted RBP18.45■□□□□ 0.54
NSMCE1-202ENST00000561960 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
NSMCE1-202ENST00000561960 SLC26A8Q96RN1 970 aa18.44■□□□□ 0.54
NSMCE1-202ENST00000561960 DAPK1P53355 1430 aa18.43■□□□□ 0.54
NSMCE1-202ENST00000561960 ERBINQ96RT1 1412 aa18.42■□□□□ 0.54
NSMCE1-202ENST00000561960 EID1Q9Y6B2 187 aa18.42■□□□□ 0.54
NSMCE1-202ENST00000561960 EFCAB6Q5THR3 1501 aa18.42■□□□□ 0.54
NSMCE1-202ENST00000561960 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
NSMCE1-202ENST00000561960 TMEM2Q9UHN6 1383 aa18.41■□□□□ 0.54
NSMCE1-202ENST00000561960 MAP3K1Q13233 1512 aa18.4■□□□□ 0.54
NSMCE1-202ENST00000561960 GCC2Q8IWJ2 1684 aa18.4■□□□□ 0.54
NSMCE1-202ENST00000561960 BCANQ96GW7 911 aa18.39■□□□□ 0.53
NSMCE1-202ENST00000561960 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
NSMCE1-202ENST00000561960 IDI1Q13907 227 aa18.38■□□□□ 0.53
NSMCE1-202ENST00000561960 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
NSMCE1-202ENST00000561960 KANK1Q14678 1352 aa18.37■□□□□ 0.53
NSMCE1-202ENST00000561960 FGD6Q6ZV73 1430 aa18.37■□□□□ 0.53
NSMCE1-202ENST00000561960 ADGRB3O60242 1522 aa18.37■□□□□ 0.53
NSMCE1-202ENST00000561960 TET3O43151 1660 aa18.36■□□□□ 0.53
NSMCE1-202ENST00000561960 PROSER2Q86WR7 435 aaPredicted RBP18.36■□□□□ 0.53
NSMCE1-202ENST00000561960 POTEAQ6S8J7 498 aa18.35■□□□□ 0.53
NSMCE1-202ENST00000561960 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
NSMCE1-202ENST00000561960 APLP2Q06481 763 aa18.32■□□□□ 0.52
NSMCE1-202ENST00000561960 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
NSMCE1-202ENST00000561960 CHD2O14647 1828 aaKnown RBP18.32■□□□□ 0.52
NSMCE1-202ENST00000561960 NWD1Q149M9 1564 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms