RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CCDC144AA2RUR9 1427 aa13.7□□□□□ -0.22
SMG1-205ENST00000561947 INO80Q9ULG1 1556 aaPredicted RBP13.7□□□□□ -0.22
SMG1-205ENST00000561947 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
SMG1-205ENST00000561947 USP47Q96K76 1375 aa13.69□□□□□ -0.22
SMG1-205ENST00000561947 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
SMG1-205ENST00000561947 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
SMG1-205ENST00000561947 ATP10AO60312 1499 aa13.67□□□□□ -0.22
SMG1-205ENST00000561947 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
SMG1-205ENST00000561947 KIF7Q2M1P5 1343 aa13.67□□□□□ -0.22
SMG1-205ENST00000561947 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
SMG1-205ENST00000561947 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
SMG1-205ENST00000561947 DCAF11Q8TEB1 546 aa13.65□□□□□ -0.22
SMG1-205ENST00000561947 TRPM1Q7Z4N2 1603 aa13.64□□□□□ -0.23
SMG1-205ENST00000561947 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
SMG1-205ENST00000561947 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMG1-205ENST00000561947 E9PCH4 1651 aa13.64□□□□□ -0.23
SMG1-205ENST00000561947 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
SMG1-205ENST00000561947 PRAG1Q86YV5 1406 aa13.63□□□□□ -0.23
SMG1-205ENST00000561947 EIF2AK4Q9P2K8 1649 aaKnown RBP13.63□□□□□ -0.23
SMG1-205ENST00000561947 A2MP01023 1474 aa13.63□□□□□ -0.23
SMG1-205ENST00000561947 CARD11Q9BXL7 1154 aa13.62□□□□□ -0.23
SMG1-205ENST00000561947 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
SMG1-205ENST00000561947 TET3O43151 1660 aa13.61□□□□□ -0.23
SMG1-205ENST00000561947 ARID4BQ4LE39 1312 aaPredicted RBP13.61□□□□□ -0.23
SMG1-205ENST00000561947 VWDEQ8N2E2 1590 aa13.61□□□□□ -0.23
SMG1-205ENST00000561947 SPHKAPQ2M3C7 1700 aa13.6□□□□□ -0.23
SMG1-205ENST00000561947 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
SMG1-205ENST00000561947 LAMC1P11047 1609 aa13.59□□□□□ -0.23
SMG1-205ENST00000561947 TRPM2O94759 1503 aa13.59□□□□□ -0.23
SMG1-205ENST00000561947 ROCK2O75116 1388 aaKnown RBP13.59□□□□□ -0.23
SMG1-205ENST00000561947 PRKRIP1Q9H875 184 aaPredicted RBP13.58□□□□□ -0.23
SMG1-205ENST00000561947 ZNF518AQ6AHZ1 1483 aa13.58□□□□□ -0.23
SMG1-205ENST00000561947 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.24
SMG1-205ENST00000561947 CEP152O94986 1710 aa13.58□□□□□ -0.24
SMG1-205ENST00000561947 PRDM15P57071 1507 aaPredicted RBP13.58□□□□□ -0.24
SMG1-205ENST00000561947 RGL3Q3MIN7 710 aa13.58□□□□□ -0.24
SMG1-205ENST00000561947 MROH1Q8NDA8 1641 aa13.58□□□□□ -0.24
SMG1-205ENST00000561947 CD109Q6YHK3 1445 aa13.57□□□□□ -0.24
SMG1-205ENST00000561947 KANK1Q14678 1352 aa13.57□□□□□ -0.24
SMG1-205ENST00000561947 PTPRTO14522 1441 aa13.57□□□□□ -0.24
SMG1-205ENST00000561947 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
SMG1-205ENST00000561947 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
SMG1-205ENST00000561947 CLTCL1P53675 1640 aa13.55□□□□□ -0.24
SMG1-205ENST00000561947 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
SMG1-205ENST00000561947 RNF17Q9BXT8 1623 aaKnown RBP13.54□□□□□ -0.24
SMG1-205ENST00000561947 KIF3BO15066 747 aa13.54□□□□□ -0.24
SMG1-205ENST00000561947 POGZQ7Z3K3 1410 aa13.54□□□□□ -0.24
SMG1-205ENST00000561947 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
SMG1-205ENST00000561947 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.24
SMG1-205ENST00000561947 MADDQ8WXG6 1647 aa13.52□□□□□ -0.25
SMG1-205ENST00000561947 MLH3Q9UHC1 1453 aa13.51□□□□□ -0.25
SMG1-205ENST00000561947 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
SMG1-205ENST00000561947 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
SMG1-205ENST00000561947 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
SMG1-205ENST00000561947 SUPT16HQ9Y5B9 1047 aaKnown RBP13.51□□□□□ -0.25
SMG1-205ENST00000561947 NEURL4Q96JN8 1562 aa13.5□□□□□ -0.25
SMG1-205ENST00000561947 NEO1Q92859 1461 aa13.5□□□□□ -0.25
SMG1-205ENST00000561947 LMTK2Q8IWU2 1503 aa13.5□□□□□ -0.25
SMG1-205ENST00000561947 PPRC1Q5VV67 1664 aaKnown RBP13.49□□□□□ -0.25
SMG1-205ENST00000561947 FRMPD1Q5SYB0 1578 aa13.49□□□□□ -0.25
SMG1-205ENST00000561947 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMG1-205ENST00000561947 MRS2Q9HD23 443 aa13.48□□□□□ -0.25
SMG1-205ENST00000561947 ABCA6Q8N139 1617 aa13.48□□□□□ -0.25
SMG1-205ENST00000561947 COL17A1Q9UMD9 1497 aaPredicted RBP13.47□□□□□ -0.25
SMG1-205ENST00000561947 MAP3K4Q9Y6R4 1608 aa13.47□□□□□ -0.25
SMG1-205ENST00000561947 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
SMG1-205ENST00000561947 KIF1BO60333 1816 aa13.47□□□□□ -0.25
SMG1-205ENST00000561947 IQGAP1P46940 1657 aa13.46□□□□□ -0.25
SMG1-205ENST00000561947 KIAA1210Q9ULL0 1709 aa13.45□□□□□ -0.26
SMG1-205ENST00000561947 GLI2P10070 1586 aa13.44□□□□□ -0.26
SMG1-205ENST00000561947 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
SMG1-205ENST00000561947 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
SMG1-205ENST00000561947 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
SMG1-205ENST00000561947 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
SMG1-205ENST00000561947 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
SMG1-205ENST00000561947 TESK2Q96S53 571 aa13.44□□□□□ -0.26
SMG1-205ENST00000561947 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
SMG1-205ENST00000561947 FAM9BQ8IZU0 186 aa13.43□□□□□ -0.26
SMG1-205ENST00000561947 MROH2AA6NES4 1674 aa13.42□□□□□ -0.26
SMG1-205ENST00000561947 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
SMG1-205ENST00000561947 DIP2CQ9Y2E4 1556 aa13.42□□□□□ -0.26
SMG1-205ENST00000561947 MYOM2P54296 1465 aa13.42□□□□□ -0.26
SMG1-205ENST00000561947 KTN1Q86UP2 1357 aaKnown RBP13.42□□□□□ -0.26
SMG1-205ENST00000561947 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
SMG1-205ENST00000561947 ABCC3O15438 1527 aa13.4□□□□□ -0.26
SMG1-205ENST00000561947 SCAF11Q99590 1463 aaKnown RBP13.4□□□□□ -0.26
SMG1-205ENST00000561947 CYB5RLQ6IPT4 315 aa13.4□□□□□ -0.26
SMG1-205ENST00000561947 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
SMG1-205ENST00000561947 RAPGEF3O95398 923 aa13.39□□□□□ -0.27
SMG1-205ENST00000561947 NPATQ14207 1427 aa13.39□□□□□ -0.27
SMG1-205ENST00000561947 TMF1P82094 1093 aa13.39□□□□□ -0.27
SMG1-205ENST00000561947 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
SMG1-205ENST00000561947 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
SMG1-205ENST00000561947 RALBP1Q15311 655 aa13.38□□□□□ -0.27
SMG1-205ENST00000561947 NEFLP07196 543 aa13.38□□□□□ -0.27
SMG1-205ENST00000561947 FKBP8Q14318 412 aa13.38□□□□□ -0.27
SMG1-205ENST00000561947 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
SMG1-205ENST00000561947 CFAP65Q6ZU64 1925 aaKnown RBP13.38□□□□□ -0.27
SMG1-205ENST00000561947 GGT6Q6P531 493 aa13.37□□□□□ -0.27
SMG1-205ENST00000561947 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms