RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
ITGAM-203ENST00000561838 POLR1AO95602 1720 aaPredicted RBP20.93■□□□□ 0.94
ITGAM-203ENST00000561838 CEP162Q5TB80 1403 aa20.93■□□□□ 0.94
ITGAM-203ENST00000561838 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
ITGAM-203ENST00000561838 ANKLE2Q86XL3 938 aa20.92■□□□□ 0.94
ITGAM-203ENST00000561838 THEMISQ8N1K5 641 aaPredicted RBP20.92■□□□□ 0.94
ITGAM-203ENST00000561838 PZPP20742 1482 aa20.92■□□□□ 0.94
ITGAM-203ENST00000561838 ZNF644Q9H582 1327 aaPredicted RBP20.91■□□□□ 0.94
ITGAM-203ENST00000561838 SHANK2Q9UPX8 1470 aa20.91■□□□□ 0.94
ITGAM-203ENST00000561838 KDM5DQ9BY66 1539 aa20.9■□□□□ 0.94
ITGAM-203ENST00000561838 KIF3BO15066 747 aa20.9■□□□□ 0.94
ITGAM-203ENST00000561838 WASHC2CQ9Y4E1 1318 aa20.89■□□□□ 0.93
ITGAM-203ENST00000561838 CCDC141Q6ZP82 1450 aa20.88■□□□□ 0.93
ITGAM-203ENST00000561838 NLRP1Q9C000 1473 aa20.88■□□□□ 0.93
ITGAM-203ENST00000561838 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
ITGAM-203ENST00000561838 HSPA1LP34931 641 aa20.87■□□□□ 0.93
ITGAM-203ENST00000561838 MIA2Q96PC5 1412 aa20.87■□□□□ 0.93
ITGAM-203ENST00000561838 NEURL4Q96JN8 1562 aa20.86■□□□□ 0.93
ITGAM-203ENST00000561838 FBXO31Q5XUX0 539 aaPredicted RBP20.85■□□□□ 0.93
ITGAM-203ENST00000561838 MED14O60244 1454 aa20.85■□□□□ 0.93
ITGAM-203ENST00000561838 PIP4K2BP78356 416 aa20.84■□□□□ 0.93
ITGAM-203ENST00000561838 DEPDC5O75140 1603 aa20.84■□□□□ 0.93
ITGAM-203ENST00000561838 TSPY4P0CV99 314 aa20.83■□□□□ 0.93
ITGAM-203ENST00000561838 TSPY10P0CW01 314 aa20.83■□□□□ 0.93
ITGAM-203ENST00000561838 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.92
ITGAM-203ENST00000561838 UGGT1Q9NYU2 1555 aa20.82■□□□□ 0.92
ITGAM-203ENST00000561838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.92
ITGAM-203ENST00000561838 NPHP4O75161 1426 aaPredicted RBP20.81■□□□□ 0.92
ITGAM-203ENST00000561838 CAMSAP2Q08AD1 1489 aa20.8■□□□□ 0.92
ITGAM-203ENST00000561838 VWDEQ8N2E2 1590 aa20.8■□□□□ 0.92
ITGAM-203ENST00000561838 ARHGEF5Q12774 1597 aa20.79■□□□□ 0.92
ITGAM-203ENST00000561838 NCOA2Q15596 1464 aa20.78■□□□□ 0.92
ITGAM-203ENST00000561838 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
ITGAM-203ENST00000561838 ZC3H13Q5T200 1668 aaKnown RBP20.75■□□□□ 0.91
ITGAM-203ENST00000561838 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
ITGAM-203ENST00000561838 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
ITGAM-203ENST00000561838 SYNMO15061 1565 aa20.71■□□□□ 0.91
ITGAM-203ENST00000561838 EIF2AK4Q9P2K8 1649 aaKnown RBP20.7■□□□□ 0.9
ITGAM-203ENST00000561838 MAST1Q9Y2H9 1570 aa20.69■□□□□ 0.9
ITGAM-203ENST00000561838 ABCC3O15438 1527 aa20.68■□□□□ 0.9
ITGAM-203ENST00000561838 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
ITGAM-203ENST00000561838 ALKQ9UM73 1620 aa20.67■□□□□ 0.9
ITGAM-203ENST00000561838 ERVK-7P63135 1459 aa20.66■□□□□ 0.9
ITGAM-203ENST00000561838 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
ITGAM-203ENST00000561838 STRCP1A6NGW2 1772 aa20.62■□□□□ 0.89
ITGAM-203ENST00000561838 UBR1Q8IWV7 1749 aa20.61■□□□□ 0.89
ITGAM-203ENST00000561838 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
ITGAM-203ENST00000561838 LRRC9Q6ZRR7 1453 aa20.6■□□□□ 0.89
ITGAM-203ENST00000561838 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
ITGAM-203ENST00000561838 SLIT1O75093 1534 aa20.59■□□□□ 0.89
ITGAM-203ENST00000561838 DUOX2Q9NRD8 1548 aa20.59■□□□□ 0.89
ITGAM-203ENST00000561838 ARHGAP23Q9P227 1491 aa20.58■□□□□ 0.89
ITGAM-203ENST00000561838 TXNDC2Q86VQ3 553 aa20.58■□□□□ 0.89
ITGAM-203ENST00000561838 MYOM3Q5VTT5 1437 aa20.58■□□□□ 0.88
ITGAM-203ENST00000561838 MROH1Q8NDA8 1641 aa20.57■□□□□ 0.88
ITGAM-203ENST00000561838 MAP3K1Q13233 1512 aa20.56■□□□□ 0.88
ITGAM-203ENST00000561838 CEP152O94986 1710 aa20.55■□□□□ 0.88
ITGAM-203ENST00000561838 CFAP65Q6ZU64 1925 aaKnown RBP20.55■□□□□ 0.88
ITGAM-203ENST00000561838 VPS8Q8N3P4 1428 aa20.54■□□□□ 0.88
ITGAM-203ENST00000561838 LTKP29376 864 aa20.53■□□□□ 0.88
ITGAM-203ENST00000561838 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
ITGAM-203ENST00000561838 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
ITGAM-203ENST00000561838 PRDM15P57071 1507 aaPredicted RBP20.52■□□□□ 0.87
ITGAM-203ENST00000561838 KANK1Q14678 1352 aa20.5■□□□□ 0.87
ITGAM-203ENST00000561838 KDM5AP29375 1690 aaKnown RBP20.5■□□□□ 0.87
ITGAM-203ENST00000561838 KIF15Q9NS87 1388 aa20.49■□□□□ 0.87
ITGAM-203ENST00000561838 TMEM2Q9UHN6 1383 aa20.49■□□□□ 0.87
ITGAM-203ENST00000561838 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
ITGAM-203ENST00000561838 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
ITGAM-203ENST00000561838 XIRP1Q702N8 1843 aaKnown RBP20.47■□□□□ 0.87
ITGAM-203ENST00000561838 KCNA6P17658 529 aa20.46■□□□□ 0.87
ITGAM-203ENST00000561838 RGS17Q9UGC6 210 aaPredicted RBP20.46■□□□□ 0.87
ITGAM-203ENST00000561838 PIK3C2BO00750 1634 aa20.44■□□□□ 0.86
ITGAM-203ENST00000561838 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
ITGAM-203ENST00000561838 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
ITGAM-203ENST00000561838 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
ITGAM-203ENST00000561838 RRP7BPQ9NSQ0 103 aa20.42■□□□□ 0.86
ITGAM-203ENST00000561838 LMTK2Q8IWU2 1503 aa20.42■□□□□ 0.86
ITGAM-203ENST00000561838 CROCC2H7BZ55 1655 aa20.42■□□□□ 0.86
ITGAM-203ENST00000561838 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
ITGAM-203ENST00000561838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGAM-203ENST00000561838 ABCC5O15440 1437 aa20.41■□□□□ 0.86
ITGAM-203ENST00000561838 IDI1Q13907 227 aa20.39■□□□□ 0.85
ITGAM-203ENST00000561838 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
ITGAM-203ENST00000561838 TET3O43151 1660 aa20.38■□□□□ 0.85
ITGAM-203ENST00000561838 NKTRP30414 1462 aaKnown RBP20.38■□□□□ 0.85
ITGAM-203ENST00000561838 ANKRD30AQ9BXX3 1397 aa20.38■□□□□ 0.85
ITGAM-203ENST00000561838 APLP2Q06481 763 aa20.37■□□□□ 0.85
ITGAM-203ENST00000561838 PTPN23Q9H3S7 1636 aa20.37■□□□□ 0.85
ITGAM-203ENST00000561838 DAPK1P53355 1430 aa20.36■□□□□ 0.85
ITGAM-203ENST00000561838 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
ITGAM-203ENST00000561838 HDGFP51858 240 aaKnown RBP20.36■□□□□ 0.85
ITGAM-203ENST00000561838 MSH6P52701 1360 aa20.35■□□□□ 0.85
ITGAM-203ENST00000561838 NOS1P29475 1434 aa20.35■□□□□ 0.85
ITGAM-203ENST00000561838 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
ITGAM-203ENST00000561838 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
ITGAM-203ENST00000561838 POTEAQ6S8J7 498 aa20.33■□□□□ 0.85
ITGAM-203ENST00000561838 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
ITGAM-203ENST00000561838 SLAIN2Q9P270 581 aa20.31■□□□□ 0.84
ITGAM-203ENST00000561838 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms