RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
USB1-205ENST00000561743 CEP170BQ9Y4F5 1589 aaPredicted RBP21.2■□□□□ 0.98
USB1-205ENST00000561743 CAMSAP1Q5T5Y3 1602 aa21.19■□□□□ 0.98
USB1-205ENST00000561743 NCOA1Q15788 1441 aa21.19■□□□□ 0.98
USB1-205ENST00000561743 FBXO41Q8TF61 875 aa21.18■□□□□ 0.98
USB1-205ENST00000561743 DNMT1P26358 1616 aaKnown RBP21.18■□□□□ 0.98
USB1-205ENST00000561743 FGD6Q6ZV73 1430 aa21.17■□□□□ 0.98
USB1-205ENST00000561743 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
USB1-205ENST00000561743 ZC3H13Q5T200 1668 aaKnown RBP21.17■□□□□ 0.98
USB1-205ENST00000561743 TCOF1Q13428 1488 aaKnown RBP21.16■□□□□ 0.98
USB1-205ENST00000561743 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
USB1-205ENST00000561743 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
USB1-205ENST00000561743 PZPP20742 1482 aa21.15■□□□□ 0.98
USB1-205ENST00000561743 PTPRTO14522 1441 aa21.15■□□□□ 0.98
USB1-205ENST00000561743 DUOX2Q9NRD8 1548 aa21.14■□□□□ 0.98
USB1-205ENST00000561743 ABCC5O15440 1437 aa21.14■□□□□ 0.98
USB1-205ENST00000561743 CEP152O94986 1710 aa21.12■□□□□ 0.97
USB1-205ENST00000561743 WASHC2CQ9Y4E1 1318 aa21.12■□□□□ 0.97
USB1-205ENST00000561743 DAPK1P53355 1430 aa21.12■□□□□ 0.97
USB1-205ENST00000561743 ABCC3O15438 1527 aa21.11■□□□□ 0.97
USB1-205ENST00000561743 A2ML1A8K2U0 1454 aa21.11■□□□□ 0.97
USB1-205ENST00000561743 PLA2R1Q13018 1463 aa21.11■□□□□ 0.97
USB1-205ENST00000561743 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
USB1-205ENST00000561743 FBXO31Q5XUX0 539 aaPredicted RBP21.08■□□□□ 0.97
USB1-205ENST00000561743 TNRQ92752 1358 aa21.08■□□□□ 0.96
USB1-205ENST00000561743 KIF15Q9NS87 1388 aa21.08■□□□□ 0.96
USB1-205ENST00000561743 PRDM15P57071 1507 aaPredicted RBP21.07■□□□□ 0.96
USB1-205ENST00000561743 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
USB1-205ENST00000561743 DEPDC5O75140 1603 aa21.06■□□□□ 0.96
USB1-205ENST00000561743 ERBINQ96RT1 1412 aa21.05■□□□□ 0.96
USB1-205ENST00000561743 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
USB1-205ENST00000561743 SPATA31D1Q6ZQQ2 1576 aa21.04■□□□□ 0.96
USB1-205ENST00000561743 NCKAP5LQ9HCH0 1330 aa21.04■□□□□ 0.96
USB1-205ENST00000561743 CFAP65Q6ZU64 1925 aaKnown RBP21.03■□□□□ 0.96
USB1-205ENST00000561743 RRP7BPQ9NSQ0 103 aa21.02■□□□□ 0.96
USB1-205ENST00000561743 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
USB1-205ENST00000561743 PKD2Q13563 968 aa21■□□□□ 0.95
USB1-205ENST00000561743 NEURL4Q96JN8 1562 aa20.99■□□□□ 0.95
USB1-205ENST00000561743 ADGRL2O95490 1459 aa20.99■□□□□ 0.95
USB1-205ENST00000561743 ERVK-7P63135 1459 aa20.99■□□□□ 0.95
USB1-205ENST00000561743 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
USB1-205ENST00000561743 UGGT1Q9NYU2 1555 aa20.98■□□□□ 0.95
USB1-205ENST00000561743 CHIC2Q9UKJ5 165 aa20.97■□□□□ 0.95
USB1-205ENST00000561743 VWDEQ8N2E2 1590 aa20.94■□□□□ 0.94
USB1-205ENST00000561743 FAM50AQ14320 339 aaKnown RBP20.94■□□□□ 0.94
USB1-205ENST00000561743 ARHGAP31Q2M1Z3 1444 aa20.94■□□□□ 0.94
USB1-205ENST00000561743 UBR1Q8IWV7 1749 aa20.93■□□□□ 0.94
USB1-205ENST00000561743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.94
USB1-205ENST00000561743 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
USB1-205ENST00000561743 LMTK2Q8IWU2 1503 aa20.91■□□□□ 0.94
USB1-205ENST00000561743 ZNF335Q9H4Z2 1342 aaPredicted RBP20.91■□□□□ 0.94
USB1-205ENST00000561743 KANK1Q14678 1352 aa20.89■□□□□ 0.93
USB1-205ENST00000561743 THEMISQ8N1K5 641 aaPredicted RBP20.89■□□□□ 0.93
USB1-205ENST00000561743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.93
USB1-205ENST00000561743 IQGAP1P46940 1657 aa20.88■□□□□ 0.93
USB1-205ENST00000561743 EFCAB6Q5THR3 1501 aa20.87■□□□□ 0.93
USB1-205ENST00000561743 MED14O60244 1454 aa20.87■□□□□ 0.93
USB1-205ENST00000561743 ANKRD50Q9ULJ7 1429 aa20.86■□□□□ 0.93
USB1-205ENST00000561743 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
USB1-205ENST00000561743 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
USB1-205ENST00000561743 NPHP4O75161 1426 aaPredicted RBP20.83■□□□□ 0.93
USB1-205ENST00000561743 UNC13BO14795 1591 aa20.83■□□□□ 0.92
USB1-205ENST00000561743 SYNMO15061 1565 aa20.83■□□□□ 0.92
USB1-205ENST00000561743 KDM5AP29375 1690 aaKnown RBP20.83■□□□□ 0.92
USB1-205ENST00000561743 PPARGC1BQ86YN6 1023 aaKnown RBP20.81■□□□□ 0.92
USB1-205ENST00000561743 TET3O43151 1660 aa20.8■□□□□ 0.92
USB1-205ENST00000561743 SLIT1O75093 1534 aa20.8■□□□□ 0.92
USB1-205ENST00000561743 ARHGAP23Q9P227 1491 aa20.8■□□□□ 0.92
USB1-205ENST00000561743 GCC2Q8IWJ2 1684 aa20.8■□□□□ 0.92
USB1-205ENST00000561743 ROCK1Q13464 1354 aa20.79■□□□□ 0.92
USB1-205ENST00000561743 CPS1P31327 1500 aa20.78■□□□□ 0.92
USB1-205ENST00000561743 STRCP1A6NGW2 1772 aa20.78■□□□□ 0.92
USB1-205ENST00000561743 SCAF11Q99590 1463 aaKnown RBP20.77■□□□□ 0.92
USB1-205ENST00000561743 NOS1P29475 1434 aa20.77■□□□□ 0.91
USB1-205ENST00000561743 RPRD2Q5VT52 1461 aaKnown RBP20.75■□□□□ 0.91
USB1-205ENST00000561743 IQGAP3Q86VI3 1631 aa20.74■□□□□ 0.91
USB1-205ENST00000561743 E9PCH4 1651 aa20.73■□□□□ 0.91
USB1-205ENST00000561743 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
USB1-205ENST00000561743 ADGRB3O60242 1522 aa20.73■□□□□ 0.91
USB1-205ENST00000561743 LTKP29376 864 aa20.71■□□□□ 0.91
USB1-205ENST00000561743 IDI1Q13907 227 aa20.71■□□□□ 0.91
USB1-205ENST00000561743 TMEM2Q9UHN6 1383 aa20.71■□□□□ 0.91
USB1-205ENST00000561743 ITGAEP38570 1179 aa20.7■□□□□ 0.9
USB1-205ENST00000561743 RRBP1Q9P2E9 1410 aaKnown RBP20.7■□□□□ 0.9
USB1-205ENST00000561743 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
USB1-205ENST00000561743 TXNDC2Q86VQ3 553 aa20.69■□□□□ 0.9
USB1-205ENST00000561743 STAG3Q9UJ98 1225 aa20.67■□□□□ 0.9
USB1-205ENST00000561743 EID1Q9Y6B2 187 aa20.66■□□□□ 0.9
USB1-205ENST00000561743 TMEM131LA2VDJ0 1609 aa20.65■□□□□ 0.9
USB1-205ENST00000561743 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
USB1-205ENST00000561743 ALKQ9UM73 1620 aa20.64■□□□□ 0.89
USB1-205ENST00000561743 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
USB1-205ENST00000561743 XIRP1Q702N8 1843 aaKnown RBP20.63■□□□□ 0.89
USB1-205ENST00000561743 NUP155O75694 1391 aa20.6■□□□□ 0.89
USB1-205ENST00000561743 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
USB1-205ENST00000561743 SPHKAPQ2M3C7 1700 aa20.58■□□□□ 0.89
USB1-205ENST00000561743 TOM1O60784 492 aa20.56■□□□□ 0.88
USB1-205ENST00000561743 NAIPQ13075 1403 aa20.55■□□□□ 0.88
USB1-205ENST00000561743 NWD1Q149M9 1564 aa20.54■□□□□ 0.88
USB1-205ENST00000561743 RIMS2Q9UQ26 1411 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms