RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 RNF17Q9BXT8 1623 aaKnown RBP24■■□□□ 1.43
CCDC113-203ENST00000561517 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
CCDC113-203ENST00000561517 KDM5DQ9BY66 1539 aa23.98■■□□□ 1.43
CCDC113-203ENST00000561517 PTPRKQ15262 1439 aa23.97■■□□□ 1.43
CCDC113-203ENST00000561517 KIF15Q9NS87 1388 aa23.95■■□□□ 1.42
CCDC113-203ENST00000561517 MROH1Q8NDA8 1641 aa23.92■■□□□ 1.42
CCDC113-203ENST00000561517 WASHC2CQ9Y4E1 1318 aa23.91■■□□□ 1.42
CCDC113-203ENST00000561517 FAM50AQ14320 339 aaKnown RBP23.91■■□□□ 1.42
CCDC113-203ENST00000561517 RRP7BPQ9NSQ0 103 aa23.91■■□□□ 1.42
CCDC113-203ENST00000561517 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
CCDC113-203ENST00000561517 STRCQ7RTU9 1775 aa23.91■■□□□ 1.42
CCDC113-203ENST00000561517 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
CCDC113-203ENST00000561517 ZC3H13Q5T200 1668 aaKnown RBP23.9■■□□□ 1.42
CCDC113-203ENST00000561517 ADGRL2O95490 1459 aa23.89■■□□□ 1.42
CCDC113-203ENST00000561517 PZPP20742 1482 aa23.89■■□□□ 1.42
CCDC113-203ENST00000561517 NCOA1Q15788 1441 aa23.89■■□□□ 1.41
CCDC113-203ENST00000561517 ZNF142P52746 1687 aaPredicted RBP23.89■■□□□ 1.41
CCDC113-203ENST00000561517 MYO3AQ8NEV4 1616 aa23.88■■□□□ 1.41
CCDC113-203ENST00000561517 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
CCDC113-203ENST00000561517 ABCC3O15438 1527 aa23.88■■□□□ 1.41
CCDC113-203ENST00000561517 CEP152O94986 1710 aa23.85■■□□□ 1.41
CCDC113-203ENST00000561517 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
CCDC113-203ENST00000561517 PRDM15P57071 1507 aaPredicted RBP23.84■■□□□ 1.41
CCDC113-203ENST00000561517 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
CCDC113-203ENST00000561517 CEP170BQ9Y4F5 1589 aaPredicted RBP23.83■■□□□ 1.41
CCDC113-203ENST00000561517 FBXO31Q5XUX0 539 aaPredicted RBP23.82■■□□□ 1.4
CCDC113-203ENST00000561517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.81■■□□□ 1.4
CCDC113-203ENST00000561517 CFAP65Q6ZU64 1925 aaKnown RBP23.81■■□□□ 1.4
CCDC113-203ENST00000561517 CAMSAP1Q5T5Y3 1602 aa23.81■■□□□ 1.4
CCDC113-203ENST00000561517 TNRQ92752 1358 aa23.8■■□□□ 1.4
CCDC113-203ENST00000561517 A2ML1A8K2U0 1454 aa23.79■■□□□ 1.4
CCDC113-203ENST00000561517 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
CCDC113-203ENST00000561517 SPATA31D1Q6ZQQ2 1576 aa23.76■■□□□ 1.39
CCDC113-203ENST00000561517 VWDEQ8N2E2 1590 aa23.75■■□□□ 1.39
CCDC113-203ENST00000561517 PTPRTO14522 1441 aa23.75■■□□□ 1.39
CCDC113-203ENST00000561517 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
CCDC113-203ENST00000561517 ROCK1Q13464 1354 aa23.74■■□□□ 1.39
CCDC113-203ENST00000561517 ARHGAP31Q2M1Z3 1444 aa23.74■■□□□ 1.39
CCDC113-203ENST00000561517 ANKRD50Q9ULJ7 1429 aa23.74■■□□□ 1.39
CCDC113-203ENST00000561517 KANK1Q14678 1352 aa23.73■■□□□ 1.39
CCDC113-203ENST00000561517 ERVK-7P63135 1459 aa23.73■■□□□ 1.39
CCDC113-203ENST00000561517 NLRP1Q9C000 1473 aa23.73■■□□□ 1.39
CCDC113-203ENST00000561517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.39
CCDC113-203ENST00000561517 RRBP1Q9P2E9 1410 aaKnown RBP23.72■■□□□ 1.39
CCDC113-203ENST00000561517 LMTK2Q8IWU2 1503 aa23.72■■□□□ 1.39
CCDC113-203ENST00000561517 PKD2Q13563 968 aa23.67■■□□□ 1.38
CCDC113-203ENST00000561517 UGGT1Q9NYU2 1555 aa23.65■■□□□ 1.38
CCDC113-203ENST00000561517 NCKAP5LQ9HCH0 1330 aa23.65■■□□□ 1.38
CCDC113-203ENST00000561517 ITGAEP38570 1179 aa23.64■■□□□ 1.37
CCDC113-203ENST00000561517 ILDR1Q86SU0 546 aaPredicted RBP23.64■■□□□ 1.37
CCDC113-203ENST00000561517 UNC13BO14795 1591 aa23.64■■□□□ 1.37
CCDC113-203ENST00000561517 POLR1AO95602 1720 aaPredicted RBP23.63■■□□□ 1.37
CCDC113-203ENST00000561517 EFCAB6Q5THR3 1501 aa23.63■■□□□ 1.37
CCDC113-203ENST00000561517 THEMISQ8N1K5 641 aaPredicted RBP23.62■■□□□ 1.37
CCDC113-203ENST00000561517 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
CCDC113-203ENST00000561517 TET3O43151 1660 aa23.59■■□□□ 1.37
CCDC113-203ENST00000561517 CERKQ8TCT0 537 aa23.58■■□□□ 1.37
CCDC113-203ENST00000561517 GCC2Q8IWJ2 1684 aa23.57■■□□□ 1.36
CCDC113-203ENST00000561517 NEURL4Q96JN8 1562 aa23.57■■□□□ 1.36
CCDC113-203ENST00000561517 FBXO41Q8TF61 875 aa23.56■■□□□ 1.36
CCDC113-203ENST00000561517 NOS1P29475 1434 aa23.56■■□□□ 1.36
CCDC113-203ENST00000561517 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
CCDC113-203ENST00000561517 IQGAP3Q86VI3 1631 aa23.55■■□□□ 1.36
CCDC113-203ENST00000561517 LTBP4Q8N2S1 1624 aa23.55■■□□□ 1.36
CCDC113-203ENST00000561517 SYNMO15061 1565 aa23.54■■□□□ 1.36
CCDC113-203ENST00000561517 ANKLE2Q86XL3 938 aa23.54■■□□□ 1.36
CCDC113-203ENST00000561517 PIK3C2BO00750 1634 aa23.53■■□□□ 1.36
CCDC113-203ENST00000561517 KDM5AP29375 1690 aaKnown RBP23.52■■□□□ 1.36
CCDC113-203ENST00000561517 MED14O60244 1454 aa23.51■■□□□ 1.35
CCDC113-203ENST00000561517 E9PCH4 1651 aa23.49■■□□□ 1.35
CCDC113-203ENST00000561517 ARHGAP23Q9P227 1491 aa23.49■■□□□ 1.35
CCDC113-203ENST00000561517 SLIT1O75093 1534 aa23.49■■□□□ 1.35
CCDC113-203ENST00000561517 IDI1Q13907 227 aa23.48■■□□□ 1.35
CCDC113-203ENST00000561517 NUP155O75694 1391 aa23.48■■□□□ 1.35
CCDC113-203ENST00000561517 NAIPQ13075 1403 aa23.48■■□□□ 1.35
CCDC113-203ENST00000561517 NPHP4O75161 1426 aaPredicted RBP23.46■■□□□ 1.35
CCDC113-203ENST00000561517 IQGAP1P46940 1657 aa23.46■■□□□ 1.35
CCDC113-203ENST00000561517 ZNF335Q9H4Z2 1342 aaPredicted RBP23.46■■□□□ 1.35
CCDC113-203ENST00000561517 SLC52A1Q9NWF4 448 aa23.45■■□□□ 1.34
CCDC113-203ENST00000561517 HFM1A2PYH4 1435 aa23.43■■□□□ 1.34
CCDC113-203ENST00000561517 IQSEC2Q5JU85 1478 aa23.43■■□□□ 1.34
CCDC113-203ENST00000561517 SCAF11Q99590 1463 aaKnown RBP23.43■■□□□ 1.34
CCDC113-203ENST00000561517 ADGRB3O60242 1522 aa23.42■■□□□ 1.34
CCDC113-203ENST00000561517 TMEM2Q9UHN6 1383 aa23.41■■□□□ 1.34
CCDC113-203ENST00000561517 STAG3Q9UJ98 1225 aa23.41■■□□□ 1.34
CCDC113-203ENST00000561517 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
CCDC113-203ENST00000561517 LTKP29376 864 aa23.4■■□□□ 1.34
CCDC113-203ENST00000561517 TXNDC2Q86VQ3 553 aa23.38■■□□□ 1.33
CCDC113-203ENST00000561517 EID1Q9Y6B2 187 aa23.37■■□□□ 1.33
CCDC113-203ENST00000561517 TMEM131LA2VDJ0 1609 aa23.36■■□□□ 1.33
CCDC113-203ENST00000561517 CPS1P31327 1500 aa23.34■■□□□ 1.33
CCDC113-203ENST00000561517 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.33
CCDC113-203ENST00000561517 STRCP1A6NGW2 1772 aa23.32■■□□□ 1.32
CCDC113-203ENST00000561517 ZFYVE9O95405 1425 aa23.29■■□□□ 1.32
CCDC113-203ENST00000561517 RIMS2Q9UQ26 1411 aa23.25■■□□□ 1.31
CCDC113-203ENST00000561517 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
CCDC113-203ENST00000561517 CHGAP10645 457 aaKnown RBP23.23■■□□□ 1.31
CCDC113-203ENST00000561517 HDGFP51858 240 aaKnown RBP23.23■■□□□ 1.31
CCDC113-203ENST00000561517 TRPM2O94759 1503 aa23.23■■□□□ 1.31
CCDC113-203ENST00000561517 CLTCL1P53675 1640 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms