RNA–Protein interactions for RNA: ENST00000561374.1

PDE8A-216, Transcript of phosphodiesterase 8A, humanhuman

TSL 4

Gene PDE8A, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-216ENST00000561374 CCDC18Q5T9S5 1454 aa24.09■■□□□ 1.45
PDE8A-216ENST00000561374 ADGBQ8N7X0 1667 aa24.07■■□□□ 1.44
PDE8A-216ENST00000561374 FBXO31Q5XUX0 539 aaPredicted RBP24.06■■□□□ 1.44
PDE8A-216ENST00000561374 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
PDE8A-216ENST00000561374 IQGAP1P46940 1657 aa24.05■■□□□ 1.44
PDE8A-216ENST00000561374 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
PDE8A-216ENST00000561374 SYNMO15061 1565 aa24.05■■□□□ 1.44
PDE8A-216ENST00000561374 SETD1AO15047 1707 aaKnown RBP24.04■■□□□ 1.44
PDE8A-216ENST00000561374 DEPDC5O75140 1603 aa24.03■■□□□ 1.44
PDE8A-216ENST00000561374 POTEAQ6S8J7 498 aa24.03■■□□□ 1.44
PDE8A-216ENST00000561374 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
PDE8A-216ENST00000561374 MED14O60244 1454 aa24■■□□□ 1.43
PDE8A-216ENST00000561374 PZPP20742 1482 aa24■■□□□ 1.43
PDE8A-216ENST00000561374 PLEKHH2Q8IVE3 1493 aa24■■□□□ 1.43
PDE8A-216ENST00000561374 FAM135AQ9P2D6 1515 aa24■■□□□ 1.43
PDE8A-216ENST00000561374 UGGT1Q9NYU2 1555 aa24■■□□□ 1.43
PDE8A-216ENST00000561374 THEMISQ8N1K5 641 aaPredicted RBP23.99■■□□□ 1.43
PDE8A-216ENST00000561374 KIAA1107Q9UPP5 1409 aa23.99■■□□□ 1.43
PDE8A-216ENST00000561374 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
PDE8A-216ENST00000561374 KDM5DQ9BY66 1539 aa23.97■■□□□ 1.43
PDE8A-216ENST00000561374 CFDP1Q9UEE9 299 aaPredicted RBP23.96■■□□□ 1.43
PDE8A-216ENST00000561374 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
PDE8A-216ENST00000561374 MIA2Q96PC5 1412 aa23.92■■□□□ 1.42
PDE8A-216ENST00000561374 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
PDE8A-216ENST00000561374 KIF3BO15066 747 aa23.9■■□□□ 1.42
PDE8A-216ENST00000561374 WASHC2CQ9Y4E1 1318 aa23.88■■□□□ 1.41
PDE8A-216ENST00000561374 DHX29Q7Z478 1369 aaKnown RBP23.87■■□□□ 1.41
PDE8A-216ENST00000561374 FYCO1Q9BQS8 1478 aa23.86■■□□□ 1.41
PDE8A-216ENST00000561374 ZC3H13Q5T200 1668 aaKnown RBP23.85■■□□□ 1.41
PDE8A-216ENST00000561374 XIRP1Q702N8 1843 aaKnown RBP23.84■■□□□ 1.41
PDE8A-216ENST00000561374 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
PDE8A-216ENST00000561374 ZNF644Q9H582 1327 aaPredicted RBP23.83■■□□□ 1.4
PDE8A-216ENST00000561374 RTEL1-TNFRSF6BF6WH68 1400 aa23.8■■□□□ 1.4
PDE8A-216ENST00000561374 FAM135BQ49AJ0 1406 aa23.79■■□□□ 1.4
PDE8A-216ENST00000561374 MBD5Q9P267 1494 aa23.78■■□□□ 1.4
PDE8A-216ENST00000561374 ROBO1Q9Y6N7 1651 aa23.77■■□□□ 1.4
PDE8A-216ENST00000561374 SCAF11Q99590 1463 aaKnown RBP23.76■■□□□ 1.39
PDE8A-216ENST00000561374 TIAM1Q13009 1591 aa23.75■■□□□ 1.39
PDE8A-216ENST00000561374 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
PDE8A-216ENST00000561374 UPF1Q92900 1129 aaKnown RBP eCLIP23.73■■□□□ 1.39
PDE8A-216ENST00000561374 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
PDE8A-216ENST00000561374 ERVK-7P63135 1459 aa23.7■■□□□ 1.38
PDE8A-216ENST00000561374 CCDC141Q6ZP82 1450 aa23.69■■□□□ 1.38
PDE8A-216ENST00000561374 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
PDE8A-216ENST00000561374 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
PDE8A-216ENST00000561374 ABCC3O15438 1527 aa23.68■■□□□ 1.38
PDE8A-216ENST00000561374 PHLPP1O60346 1717 aa23.67■■□□□ 1.38
PDE8A-216ENST00000561374 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
PDE8A-216ENST00000561374 LRRC9Q6ZRR7 1453 aa23.65■■□□□ 1.38
PDE8A-216ENST00000561374 LTKP29376 864 aa23.65■■□□□ 1.38
PDE8A-216ENST00000561374 CFAP65Q6ZU64 1925 aaKnown RBP23.65■■□□□ 1.38
PDE8A-216ENST00000561374 NCOA2Q15596 1464 aa23.64■■□□□ 1.38
PDE8A-216ENST00000561374 JCADQ9P266 1359 aa23.63■■□□□ 1.37
PDE8A-216ENST00000561374 RBM33Q96EV2 1170 aaKnown RBP23.62■■□□□ 1.37
PDE8A-216ENST00000561374 MAP3K1Q13233 1512 aa23.62■■□□□ 1.37
PDE8A-216ENST00000561374 ARHGAP23Q9P227 1491 aa23.62■■□□□ 1.37
PDE8A-216ENST00000561374 SLIT1O75093 1534 aa23.61■■□□□ 1.37
PDE8A-216ENST00000561374 MEX3CQ5U5Q3 659 aaKnown RBP23.61■■□□□ 1.37
PDE8A-216ENST00000561374 CAMSAP2Q08AD1 1489 aa23.61■■□□□ 1.37
PDE8A-216ENST00000561374 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
PDE8A-216ENST00000561374 EHBP1L1Q8N3D4 1523 aa23.59■■□□□ 1.37
PDE8A-216ENST00000561374 CEP152O94986 1710 aa23.59■■□□□ 1.37
PDE8A-216ENST00000561374 PROSER2Q86WR7 435 aaPredicted RBP23.57■■□□□ 1.36
PDE8A-216ENST00000561374 LRP6O75581 1613 aa23.56■■□□□ 1.36
PDE8A-216ENST00000561374 ZNF772Q68DY9 489 aaPredicted RBP23.55■■□□□ 1.36
PDE8A-216ENST00000561374 MSH6P52701 1360 aa23.52■■□□□ 1.36
PDE8A-216ENST00000561374 SRCAPQ6ZRS2 3230 aa23.52■■□□□ 1.36
PDE8A-216ENST00000561374 COL16A1Q07092 1604 aaPredicted RBP23.51■■□□□ 1.35
PDE8A-216ENST00000561374 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
PDE8A-216ENST00000561374 KCNA6P17658 529 aa23.51■■□□□ 1.35
PDE8A-216ENST00000561374 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
PDE8A-216ENST00000561374 PRDM15P57071 1507 aaPredicted RBP23.5■■□□□ 1.35
PDE8A-216ENST00000561374 PIK3C2BO00750 1634 aa23.49■■□□□ 1.35
PDE8A-216ENST00000561374 TSPY4P0CV99 314 aa23.49■■□□□ 1.35
PDE8A-216ENST00000561374 TSPY10P0CW01 314 aa23.49■■□□□ 1.35
PDE8A-216ENST00000561374 RSPH4AQ5TD94 716 aa23.49■■□□□ 1.35
PDE8A-216ENST00000561374 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
PDE8A-216ENST00000561374 RXRBP28702 533 aa23.48■■□□□ 1.35
PDE8A-216ENST00000561374 SLC26A8Q96RN1 970 aa23.48■■□□□ 1.35
PDE8A-216ENST00000561374 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
PDE8A-216ENST00000561374 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
PDE8A-216ENST00000561374 TMEM2Q9UHN6 1383 aa23.48■■□□□ 1.35
PDE8A-216ENST00000561374 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
PDE8A-216ENST00000561374 SPATA31A6Q5VVP1 1343 aa23.47■■□□□ 1.35
PDE8A-216ENST00000561374 NKTRP30414 1462 aaKnown RBP23.47■■□□□ 1.35
PDE8A-216ENST00000561374 NWD1Q149M9 1564 aa23.44■■□□□ 1.34
PDE8A-216ENST00000561374 FGD6Q6ZV73 1430 aa23.42■■□□□ 1.34
PDE8A-216ENST00000561374 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
PDE8A-216ENST00000561374 CDK12Q9NYV4 1490 aaPredicted RBP23.41■■□□□ 1.34
PDE8A-216ENST00000561374 SHPRHQ149N8 1683 aa23.4■■□□□ 1.34
PDE8A-216ENST00000561374 TET3O43151 1660 aa23.39■■□□□ 1.34
PDE8A-216ENST00000561374 KDM5AP29375 1690 aaKnown RBP23.39■■□□□ 1.34
PDE8A-216ENST00000561374 BCANQ96GW7 911 aa23.39■■□□□ 1.33
PDE8A-216ENST00000561374 MAST1Q9Y2H9 1570 aa23.38■■□□□ 1.33
PDE8A-216ENST00000561374 NUTM2BA6NNL0 878 aaPredicted RBP23.37■■□□□ 1.33
PDE8A-216ENST00000561374 NUTM2EB1AL46 878 aaPredicted RBP23.37■■□□□ 1.33
PDE8A-216ENST00000561374 NUTM2AQ8IVF1 878 aaPredicted RBP23.37■■□□□ 1.33
PDE8A-216ENST00000561374 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
PDE8A-216ENST00000561374 RGS12O14924 1447 aa23.33■■□□□ 1.33
PDE8A-216ENST00000561374 C14orf37Q86TY3 774 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms