RNA–Protein interactions for RNA: ENST00000561366.1

IDH3A-223, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 3 BASIC

Gene IDH3A, Length 389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-223	ENST00000561366	NAIP	Q13075	1403 aa		10.55	□□□□□ -0.72
IDH3A-223	ENST00000561366	AGL	P35573	1532 aa		10.54	□□□□□ -0.72
IDH3A-223	ENST00000561366	PLXNC1	O60486	1568 aa		10.54	□□□□□ -0.72
IDH3A-223	ENST00000561366	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.54	□□□□□ -0.72
IDH3A-223	ENST00000561366	ERBIN	Q96RT1	1412 aa		10.54	□□□□□ -0.72
IDH3A-223	ENST00000561366	RERE	Q9P2R6	1566 aa		10.53	□□□□□ -0.72
IDH3A-223	ENST00000561366	BCORL1	Q5H9F3	1711 aa		10.53	□□□□□ -0.72
IDH3A-223	ENST00000561366	NUP155	O75694	1391 aa		10.52	□□□□□ -0.72
IDH3A-223	ENST00000561366	ZMYM3	Q14202	1370 aa		10.52	□□□□□ -0.72
IDH3A-223	ENST00000561366	MADD	Q8WXG6	1647 aa		10.52	□□□□□ -0.73
IDH3A-223	ENST00000561366	KANK1	Q14678	1352 aa		10.52	□□□□□ -0.73
IDH3A-223	ENST00000561366	SETD5	Q9C0A6	1442 aa		10.51	□□□□□ -0.73
IDH3A-223	ENST00000561366	HFM1	A2PYH4	1435 aa		10.5	□□□□□ -0.73
IDH3A-223	ENST00000561366	PTPRM	P28827	1452 aa		10.5	□□□□□ -0.73
IDH3A-223	ENST00000561366	PPP6R1	Q9UPN7	881 aa		10.5	□□□□□ -0.73
IDH3A-223	ENST00000561366	RIMS1	Q86UR5	1692 aa	Known RBP	10.5	□□□□□ -0.73
IDH3A-223	ENST00000561366	RAB3GAP2	Q9H2M9	1393 aa		10.5	□□□□□ -0.73
IDH3A-223	ENST00000561366	ADAMTSL3	P82987	1691 aa		10.49	□□□□□ -0.73
IDH3A-223	ENST00000561366	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.48	□□□□□ -0.73
IDH3A-223	ENST00000561366	CLTC	Q00610	1675 aa	Known RBP	10.47	□□□□□ -0.73
IDH3A-223	ENST00000561366	PKD2	Q13563	968 aa		10.46	□□□□□ -0.73
IDH3A-223	ENST00000561366	MPHOSPH9	Q99550	1183 aa		10.46	□□□□□ -0.73
IDH3A-223	ENST00000561366	CNTLN	Q9NXG0	1405 aa		10.46	□□□□□ -0.74
IDH3A-223	ENST00000561366	ABCC3	O15438	1527 aa		10.46	□□□□□ -0.74
IDH3A-223	ENST00000561366	FER1L4	A9Z1Z3	1794 aa		10.45	□□□□□ -0.74
IDH3A-223	ENST00000561366	MROH1	Q8NDA8	1641 aa		10.45	□□□□□ -0.74
IDH3A-223	ENST00000561366	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.45	□□□□□ -0.74
IDH3A-223	ENST00000561366	KDM5D	Q9BY66	1539 aa		10.45	□□□□□ -0.74
IDH3A-223	ENST00000561366	HSPA2	P54652	639 aa		10.45	□□□□□ -0.74
IDH3A-223	ENST00000561366	CHGA	P10645	457 aa	Known RBP	10.44	□□□□□ -0.74
IDH3A-223	ENST00000561366	RNF17	Q9BXT8	1623 aa	Known RBP	10.44	□□□□□ -0.74
IDH3A-223	ENST00000561366	NPAT	Q14207	1427 aa		10.42	□□□□□ -0.74
IDH3A-223	ENST00000561366	TNR	Q92752	1358 aa		10.42	□□□□□ -0.74
IDH3A-223	ENST00000561366	GCC2	Q8IWJ2	1684 aa		10.42	□□□□□ -0.74
IDH3A-223	ENST00000561366	PRDM15	P57071	1507 aa	Predicted RBP	10.42	□□□□□ -0.74
IDH3A-223	ENST00000561366	STAG3	Q9UJ98	1225 aa		10.41	□□□□□ -0.74
IDH3A-223	ENST00000561366	FAM135A	Q9P2D6	1515 aa		10.41	□□□□□ -0.74
IDH3A-223	ENST00000561366	PZP	P20742	1482 aa		10.41	□□□□□ -0.74
IDH3A-223	ENST00000561366	CEP152	O94986	1710 aa		10.41	□□□□□ -0.74
IDH3A-223	ENST00000561366	DEPDC5	O75140	1603 aa		10.4	□□□□□ -0.74
IDH3A-223	ENST00000561366	UNC13B	O14795	1591 aa		10.4	□□□□□ -0.74
IDH3A-223	ENST00000561366	IDI1	Q13907	227 aa		10.4	□□□□□ -0.74
IDH3A-223	ENST00000561366	C3	P01024	1663 aa		10.4	□□□□□ -0.74
IDH3A-223	ENST00000561366	VWDE	Q8N2E2	1590 aa		10.39	□□□□□ -0.75
IDH3A-223	ENST00000561366	LMTK2	Q8IWU2	1503 aa		10.38	□□□□□ -0.75
IDH3A-223	ENST00000561366	ERVK-7	P63135	1459 aa		10.38	□□□□□ -0.75
IDH3A-223	ENST00000561366	CAMSAP1	Q5T5Y3	1602 aa		10.38	□□□□□ -0.75
IDH3A-223	ENST00000561366	HRC	P23327	699 aa		10.38	□□□□□ -0.75
IDH3A-223	ENST00000561366	ARHGAP31	Q2M1Z3	1444 aa		10.37	□□□□□ -0.75
IDH3A-223	ENST00000561366	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.37	□□□□□ -0.75
IDH3A-223	ENST00000561366	UHRF1BP1	Q6BDS2	1440 aa		10.37	□□□□□ -0.75
IDH3A-223	ENST00000561366	IQGAP3	Q86VI3	1631 aa		10.36	□□□□□ -0.75
IDH3A-223	ENST00000561366	NCKAP5L	Q9HCH0	1330 aa		10.36	□□□□□ -0.75
IDH3A-223	ENST00000561366	EFCAB6	Q5THR3	1501 aa		10.36	□□□□□ -0.75
IDH3A-223	ENST00000561366	MROH2A	A6NES4	1674 aa		10.35	□□□□□ -0.75
IDH3A-223	ENST00000561366	ZNF326	Q5BKZ1	582 aa	Known RBP	10.35	□□□□□ -0.75
IDH3A-223	ENST00000561366	UGGT1	Q9NYU2	1555 aa		10.35	□□□□□ -0.75
IDH3A-223	ENST00000561366	ZC3H13	Q5T200	1668 aa	Known RBP	10.34	□□□□□ -0.75
IDH3A-223	ENST00000561366	NOS1	P29475	1434 aa		10.34	□□□□□ -0.75
IDH3A-223	ENST00000561366	NEUROD1	Q13562	356 aa		10.34	□□□□□ -0.75
IDH3A-223	ENST00000561366	RGL3	Q3MIN7	710 aa		10.34	□□□□□ -0.75
IDH3A-223	ENST00000561366	SLC52A1	Q9NWF4	448 aa		10.34	□□□□□ -0.75
IDH3A-223	ENST00000561366	CFAP65	Q6ZU64	1925 aa	Known RBP	10.34	□□□□□ -0.75
IDH3A-223	ENST00000561366	TET3	O43151	1660 aa		10.34	□□□□□ -0.75
IDH3A-223	ENST00000561366	ACIN1	Q9UKV3	1341 aa	Known RBP	10.33	□□□□□ -0.76
IDH3A-223	ENST00000561366	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.33	□□□□□ -0.76
IDH3A-223	ENST00000561366	BCAN	Q96GW7	911 aa		10.33	□□□□□ -0.76
IDH3A-223	ENST00000561366	SIN3A	Q96ST3	1273 aa		10.33	□□□□□ -0.76
IDH3A-223	ENST00000561366	PLA2R1	Q13018	1463 aa		10.33	□□□□□ -0.76
IDH3A-223	ENST00000561366	LMTK3	Q96Q04	1460 aa		10.33	□□□□□ -0.76
IDH3A-223	ENST00000561366		E9PCH4	1651 aa		10.33	□□□□□ -0.76
IDH3A-223	ENST00000561366	SPATA31D1	Q6ZQQ2	1576 aa		10.32	□□□□□ -0.76
IDH3A-223	ENST00000561366	PREX1	Q8TCU6	1659 aa		10.31	□□□□□ -0.76
IDH3A-223	ENST00000561366	SYNM	O15061	1565 aa		10.31	□□□□□ -0.76
IDH3A-223	ENST00000561366	A2ML1	A8K2U0	1454 aa		10.31	□□□□□ -0.76
IDH3A-223	ENST00000561366	RPRD2	Q5VT52	1461 aa	Known RBP	10.31	□□□□□ -0.76
IDH3A-223	ENST00000561366	TXNDC2	Q86VQ3	553 aa		10.31	□□□□□ -0.76
IDH3A-223	ENST00000561366	PTPRT	O14522	1441 aa		10.31	□□□□□ -0.76
IDH3A-223	ENST00000561366	DHX57	Q6P158	1386 aa	Known RBP	10.3	□□□□□ -0.76
IDH3A-223	ENST00000561366	ANKLE2	Q86XL3	938 aa		10.3	□□□□□ -0.76
IDH3A-223	ENST00000561366	NLRP1	Q9C000	1473 aa		10.3	□□□□□ -0.76
IDH3A-223	ENST00000561366	MYO3A	Q8NEV4	1616 aa		10.29	□□□□□ -0.76
IDH3A-223	ENST00000561366	PPP1R15A	O75807	674 aa	Predicted RBP	10.29	□□□□□ -0.76
IDH3A-223	ENST00000561366	LTK	P29376	864 aa		10.29	□□□□□ -0.76
IDH3A-223	ENST00000561366	CCER1	Q8TC90	406 aa	Predicted RBP	10.29	□□□□□ -0.76
IDH3A-223	ENST00000561366	CCDC144A	A2RUR9	1427 aa		10.29	□□□□□ -0.76
IDH3A-223	ENST00000561366	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.29	□□□□□ -0.76
IDH3A-223	ENST00000561366	ANKRD30B	Q9BXX2	1392 aa		10.28	□□□□□ -0.76
IDH3A-223	ENST00000561366	KDM2A	Q9Y2K7	1162 aa		10.28	□□□□□ -0.76
IDH3A-223	ENST00000561366	EID1	Q9Y6B2	187 aa		10.28	□□□□□ -0.76
IDH3A-223	ENST00000561366	PIK3C2B	O00750	1634 aa		10.27	□□□□□ -0.77
IDH3A-223	ENST00000561366	TMEM2	Q9UHN6	1383 aa		10.26	□□□□□ -0.77
IDH3A-223	ENST00000561366	SLC26A8	Q96RN1	970 aa		10.26	□□□□□ -0.77
IDH3A-223	ENST00000561366	TRPM2	O94759	1503 aa		10.26	□□□□□ -0.77
IDH3A-223	ENST00000561366	RIMS2	Q9UQ26	1411 aa		10.25	□□□□□ -0.77
IDH3A-223	ENST00000561366	HDGF	P51858	240 aa	Known RBP	10.25	□□□□□ -0.77
IDH3A-223	ENST00000561366	CLTCL1	P53675	1640 aa		10.25	□□□□□ -0.77
IDH3A-223	ENST00000561366	SPHKAP	Q2M3C7	1700 aa		10.24	□□□□□ -0.77
IDH3A-223	ENST00000561366	ADGRB3	O60242	1522 aa		10.23	□□□□□ -0.77
IDH3A-223	ENST00000561366	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.23	□□□□□ -0.77

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