RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ILDR1Q86SU0 546 aaPredicted RBP26.97■■□□□ 1.91
CDC42BPB-208ENST00000561271 FGD6Q6ZV73 1430 aa26.97■■□□□ 1.91
CDC42BPB-208ENST00000561271 PTPRKQ15262 1439 aa26.96■■□□□ 1.91
CDC42BPB-208ENST00000561271 CEP170BQ9Y4F5 1589 aaPredicted RBP26.96■■□□□ 1.91
CDC42BPB-208ENST00000561271 SHANK2Q9UPX8 1470 aa26.95■■□□□ 1.91
CDC42BPB-208ENST00000561271 CFAP65Q6ZU64 1925 aaKnown RBP26.95■■□□□ 1.9
CDC42BPB-208ENST00000561271 KIF3BO15066 747 aa26.95■■□□□ 1.9
CDC42BPB-208ENST00000561271 MROH1Q8NDA8 1641 aa26.94■■□□□ 1.9
CDC42BPB-208ENST00000561271 TCOF1Q13428 1488 aaKnown RBP26.94■■□□□ 1.9
CDC42BPB-208ENST00000561271 CAMSAP1Q5T5Y3 1602 aa26.93■■□□□ 1.9
CDC42BPB-208ENST00000561271 DUOX2Q9NRD8 1548 aa26.9■■□□□ 1.9
CDC42BPB-208ENST00000561271 PPP6R1Q9UPN7 881 aa26.9■■□□□ 1.9
CDC42BPB-208ENST00000561271 ABCC5O15440 1437 aa26.9■■□□□ 1.9
CDC42BPB-208ENST00000561271 DAPK1P53355 1430 aa26.89■■□□□ 1.89
CDC42BPB-208ENST00000561271 PZPP20742 1482 aa26.87■■□□□ 1.89
CDC42BPB-208ENST00000561271 ABCC3O15438 1527 aa26.86■■□□□ 1.89
CDC42BPB-208ENST00000561271 POLR1AO95602 1720 aaPredicted RBP26.86■■□□□ 1.89
CDC42BPB-208ENST00000561271 NCOA1Q15788 1441 aa26.86■■□□□ 1.89
CDC42BPB-208ENST00000561271 DEPDC5O75140 1603 aa26.84■■□□□ 1.89
CDC42BPB-208ENST00000561271 PRDM15P57071 1507 aaPredicted RBP26.82■■□□□ 1.88
CDC42BPB-208ENST00000561271 KIF15Q9NS87 1388 aa26.82■■□□□ 1.88
CDC42BPB-208ENST00000561271 WASHC2CQ9Y4E1 1318 aa26.8■■□□□ 1.88
CDC42BPB-208ENST00000561271 A2ML1A8K2U0 1454 aa26.8■■□□□ 1.88
CDC42BPB-208ENST00000561271 PTPRTO14522 1441 aa26.78■■□□□ 1.88
CDC42BPB-208ENST00000561271 ERBINQ96RT1 1412 aa26.78■■□□□ 1.88
CDC42BPB-208ENST00000561271 PLA2R1Q13018 1463 aa26.76■■□□□ 1.87
CDC42BPB-208ENST00000561271 TNRQ92752 1358 aa26.76■■□□□ 1.87
CDC42BPB-208ENST00000561271 SPATA31D1Q6ZQQ2 1576 aa26.75■■□□□ 1.87
CDC42BPB-208ENST00000561271 FBXO31Q5XUX0 539 aaPredicted RBP26.74■■□□□ 1.87
CDC42BPB-208ENST00000561271 DMRT2Q9Y5R5 561 aa26.74■■□□□ 1.87
CDC42BPB-208ENST00000561271 FBXO41Q8TF61 875 aa26.73■■□□□ 1.87
CDC42BPB-208ENST00000561271 RRP7BPQ9NSQ0 103 aa26.72■■□□□ 1.87
CDC42BPB-208ENST00000561271 ADGRL2O95490 1459 aa26.71■■□□□ 1.87
CDC42BPB-208ENST00000561271 ERVK-7P63135 1459 aa26.69■■□□□ 1.86
CDC42BPB-208ENST00000561271 CHIC2Q9UKJ5 165 aa26.69■■□□□ 1.86
CDC42BPB-208ENST00000561271 ANKRD30AQ9BXX3 1397 aa26.69■■□□□ 1.86
CDC42BPB-208ENST00000561271 NEURL4Q96JN8 1562 aa26.68■■□□□ 1.86
CDC42BPB-208ENST00000561271 FAM50AQ14320 339 aaKnown RBP26.68■■□□□ 1.86
CDC42BPB-208ENST00000561271 LTBP4Q8N2S1 1624 aa26.68■■□□□ 1.86
CDC42BPB-208ENST00000561271 NLRP1Q9C000 1473 aa26.68■■□□□ 1.86
CDC42BPB-208ENST00000561271 UBR1Q8IWV7 1749 aa26.67■■□□□ 1.86
CDC42BPB-208ENST00000561271 NCKAP5LQ9HCH0 1330 aa26.66■■□□□ 1.86
CDC42BPB-208ENST00000561271 CERKQ8TCT0 537 aa26.66■■□□□ 1.86
CDC42BPB-208ENST00000561271 UGGT1Q9NYU2 1555 aa26.66■■□□□ 1.86
CDC42BPB-208ENST00000561271 VWDEQ8N2E2 1590 aa26.64■■□□□ 1.86
CDC42BPB-208ENST00000561271 PKD2Q13563 968 aa26.58■■□□□ 1.85
CDC42BPB-208ENST00000561271 EFCAB6Q5THR3 1501 aa26.58■■□□□ 1.85
CDC42BPB-208ENST00000561271 PIK3C2BO00750 1634 aa26.57■■□□□ 1.84
CDC42BPB-208ENST00000561271 IQGAP1P46940 1657 aa26.57■■□□□ 1.84
CDC42BPB-208ENST00000561271 LMTK2Q8IWU2 1503 aa26.57■■□□□ 1.84
CDC42BPB-208ENST00000561271 PPARGC1BQ86YN6 1023 aaKnown RBP26.57■■□□□ 1.84
CDC42BPB-208ENST00000561271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.57■■□□□ 1.845e-6■□□□□ 8.1
CDC42BPB-208ENST00000561271 UNC13BO14795 1591 aa26.57■■□□□ 1.84
CDC42BPB-208ENST00000561271 GCC2Q8IWJ2 1684 aa26.57■■□□□ 1.84
CDC42BPB-208ENST00000561271 ARHGAP31Q2M1Z3 1444 aa26.56■■□□□ 1.84
CDC42BPB-208ENST00000561271 KANK1Q14678 1352 aa26.56■■□□□ 1.84
CDC42BPB-208ENST00000561271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.55■■□□□ 1.84
CDC42BPB-208ENST00000561271 TET3O43151 1660 aa26.54■■□□□ 1.84
CDC42BPB-208ENST00000561271 ANKRD50Q9ULJ7 1429 aa26.53■■□□□ 1.84
CDC42BPB-208ENST00000561271 SYNMO15061 1565 aa26.52■■□□□ 1.84
CDC42BPB-208ENST00000561271 MYO5BQ9ULV0 1848 aa26.52■■□□□ 1.84
CDC42BPB-208ENST00000561271 KDM5AP29375 1690 aaKnown RBP26.5■■□□□ 1.83
CDC42BPB-208ENST00000561271 ZNF335Q9H4Z2 1342 aaPredicted RBP26.5■■□□□ 1.83
CDC42BPB-208ENST00000561271 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
CDC42BPB-208ENST00000561271 THEMISQ8N1K5 641 aaPredicted RBP26.46■■□□□ 1.83
CDC42BPB-208ENST00000561271 STRCP1A6NGW2 1772 aa26.46■■□□□ 1.83
CDC42BPB-208ENST00000561271 E9PCH4 1651 aa26.45■■□□□ 1.82
CDC42BPB-208ENST00000561271 MED14O60244 1454 aa26.45■■□□□ 1.82
CDC42BPB-208ENST00000561271 IQGAP3Q86VI3 1631 aa26.45■■□□□ 1.82
CDC42BPB-208ENST00000561271 ROCK1Q13464 1354 aa26.44■■□□□ 1.82
CDC42BPB-208ENST00000561271 NPHP4O75161 1426 aaPredicted RBP26.43■■□□□ 1.82
CDC42BPB-208ENST00000561271 ANKLE2Q86XL3 938 aa26.42■■□□□ 1.82
CDC42BPB-208ENST00000561271 SLIT1O75093 1534 aa26.42■■□□□ 1.82
CDC42BPB-208ENST00000561271 ITGAEP38570 1179 aa26.4■■□□□ 1.82
CDC42BPB-208ENST00000561271 ARHGAP23Q9P227 1491 aa26.4■■□□□ 1.82
CDC42BPB-208ENST00000561271 ADGRB3O60242 1522 aa26.39■■□□□ 1.82
CDC42BPB-208ENST00000561271 NOS1P29475 1434 aa26.39■■□□□ 1.81
CDC42BPB-208ENST00000561271 RPRD2Q5VT52 1461 aaKnown RBP26.38■■□□□ 1.81
CDC42BPB-208ENST00000561271 SCAF11Q99590 1463 aaKnown RBP26.38■■□□□ 1.81
CDC42BPB-208ENST00000561271 CPS1P31327 1500 aa26.37■■□□□ 1.81
CDC42BPB-208ENST00000561271 RRBP1Q9P2E9 1410 aaKnown RBP26.37■■□□□ 1.81
CDC42BPB-208ENST00000561271 SPHKAPQ2M3C7 1700 aa26.31■■□□□ 1.8
CDC42BPB-208ENST00000561271 XIRP1Q702N8 1843 aaKnown RBP26.3■■□□□ 1.8
CDC42BPB-208ENST00000561271 TMEM131LA2VDJ0 1609 aa26.28■■□□□ 1.8
CDC42BPB-208ENST00000561271 TMEM2Q9UHN6 1383 aa26.27■■□□□ 1.8
CDC42BPB-208ENST00000561271 IDI1Q13907 227 aa26.26■■□□□ 1.79
CDC42BPB-208ENST00000561271 STAG3Q9UJ98 1225 aa26.26■■□□□ 1.79
CDC42BPB-208ENST00000561271 LTKP29376 864 aa26.25■■□□□ 1.79
CDC42BPB-208ENST00000561271 TXNDC2Q86VQ3 553 aa26.23■■□□□ 1.79
CDC42BPB-208ENST00000561271 NUP155O75694 1391 aa26.21■■□□□ 1.79
CDC42BPB-208ENST00000561271 UBAP1LF5GYI3 381 aa26.19■■□□□ 1.78
CDC42BPB-208ENST00000561271 EID1Q9Y6B2 187 aa26.19■■□□□ 1.78
CDC42BPB-208ENST00000561271 SLC52A1Q9NWF4 448 aa26.18■■□□□ 1.78
CDC42BPB-208ENST00000561271 LRRC7Q96NW7 1537 aa26.18■■□□□ 1.78
CDC42BPB-208ENST00000561271 ALKQ9UM73 1620 aa26.17■■□□□ 1.78
CDC42BPB-208ENST00000561271 NAIPQ13075 1403 aa26.17■■□□□ 1.78
CDC42BPB-208ENST00000561271 ZFYVE9O95405 1425 aa26.14■■□□□ 1.78
CDC42BPB-208ENST00000561271 CHD2O14647 1828 aaKnown RBP26.14■■□□□ 1.77
CDC42BPB-208ENST00000561271 KIF1BO60333 1816 aa26.13■■□□□ 1.77
CDC42BPB-208ENST00000561271 NWD1Q149M9 1564 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms