RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
CSHL1-210ENST00000561003 SUPT6HQ7KZ85 1726 aaKnown RBP16.33■□□□□ 0.2
CSHL1-210ENST00000561003 INO80Q9ULG1 1556 aaPredicted RBP16.32■□□□□ 0.2
CSHL1-210ENST00000561003 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
CSHL1-210ENST00000561003 EHBP1L1Q8N3D4 1523 aa16.3■□□□□ 0.2
CSHL1-210ENST00000561003 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
CSHL1-210ENST00000561003 HSPA1LP34931 641 aa16.29■□□□□ 0.2
CSHL1-210ENST00000561003 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
CSHL1-210ENST00000561003 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
CSHL1-210ENST00000561003 PZPP20742 1482 aa16.29■□□□□ 0.2
CSHL1-210ENST00000561003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
CSHL1-210ENST00000561003 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
CSHL1-210ENST00000561003 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
CSHL1-210ENST00000561003 CPS1P31327 1500 aa16.27■□□□□ 0.2
CSHL1-210ENST00000561003 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
CSHL1-210ENST00000561003 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.19
CSHL1-210ENST00000561003 SPATA31D1Q6ZQQ2 1576 aa16.26■□□□□ 0.19
CSHL1-210ENST00000561003 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
CSHL1-210ENST00000561003 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
CSHL1-210ENST00000561003 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
CSHL1-210ENST00000561003 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
CSHL1-210ENST00000561003 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
CSHL1-210ENST00000561003 EID1Q9Y6B2 187 aa16.23■□□□□ 0.19
CSHL1-210ENST00000561003 ZNF142P52746 1687 aaPredicted RBP16.23■□□□□ 0.19
CSHL1-210ENST00000561003 APLP2Q06481 763 aa16.22■□□□□ 0.19
CSHL1-210ENST00000561003 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
CSHL1-210ENST00000561003 CAMSAP2Q08AD1 1489 aa16.22■□□□□ 0.19
CSHL1-210ENST00000561003 MED14O60244 1454 aa16.21■□□□□ 0.19
CSHL1-210ENST00000561003 TXNDC2Q86VQ3 553 aa16.2■□□□□ 0.18
CSHL1-210ENST00000561003 UGGT1Q9NYU2 1555 aa16.19■□□□□ 0.18
CSHL1-210ENST00000561003 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
CSHL1-210ENST00000561003 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
CSHL1-210ENST00000561003 ARHGEF5Q12774 1597 aa16.16■□□□□ 0.18
CSHL1-210ENST00000561003 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
CSHL1-210ENST00000561003 KANK4Q5T7N3 995 aaPredicted RBP16.15■□□□□ 0.18
CSHL1-210ENST00000561003 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
CSHL1-210ENST00000561003 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
CSHL1-210ENST00000561003 RRP7BPQ9NSQ0 103 aa16.14■□□□□ 0.17
CSHL1-210ENST00000561003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
CSHL1-210ENST00000561003 KANK1Q14678 1352 aa16.13■□□□□ 0.17
CSHL1-210ENST00000561003 LTKP29376 864 aa16.11■□□□□ 0.17
CSHL1-210ENST00000561003 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
CSHL1-210ENST00000561003 MAP3K1Q13233 1512 aa16.1■□□□□ 0.17
CSHL1-210ENST00000561003 NEURL4Q96JN8 1562 aa16.1■□□□□ 0.17
CSHL1-210ENST00000561003 DEPDC5O75140 1603 aa16.1■□□□□ 0.17
CSHL1-210ENST00000561003 HDGFP51858 240 aaKnown RBP16.1■□□□□ 0.17
CSHL1-210ENST00000561003 KIF15Q9NS87 1388 aa16.09■□□□□ 0.17
CSHL1-210ENST00000561003 ERVK-7P63135 1459 aa16.09■□□□□ 0.17
CSHL1-210ENST00000561003 ABCC3O15438 1527 aa16.09■□□□□ 0.17
CSHL1-210ENST00000561003 SLC52A1Q9NWF4 448 aa16.08■□□□□ 0.16
CSHL1-210ENST00000561003 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
CSHL1-210ENST00000561003 KCNA6P17658 529 aa16.07■□□□□ 0.16
CSHL1-210ENST00000561003 SCAF11Q99590 1463 aaKnown RBP16.07■□□□□ 0.16
CSHL1-210ENST00000561003 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
CSHL1-210ENST00000561003 DUOX2Q9NRD8 1548 aa16.07■□□□□ 0.16
CSHL1-210ENST00000561003 MAST1Q9Y2H9 1570 aa16.06■□□□□ 0.16
CSHL1-210ENST00000561003 IDI1Q13907 227 aa16.06■□□□□ 0.16
CSHL1-210ENST00000561003 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
CSHL1-210ENST00000561003 ANKRD30AQ9BXX3 1397 aa16.04■□□□□ 0.16
CSHL1-210ENST00000561003 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
CSHL1-210ENST00000561003 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
CSHL1-210ENST00000561003 BCANQ96GW7 911 aa16.04■□□□□ 0.16
CSHL1-210ENST00000561003 ERBINQ96RT1 1412 aa16.03■□□□□ 0.16
CSHL1-210ENST00000561003 POLR1AO95602 1720 aaPredicted RBP16.03■□□□□ 0.16
CSHL1-210ENST00000561003 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
CSHL1-210ENST00000561003 RNF17Q9BXT8 1623 aaKnown RBP16.02■□□□□ 0.16
CSHL1-210ENST00000561003 ABCC5O15440 1437 aa16.02■□□□□ 0.15
CSHL1-210ENST00000561003 MED1Q15648 1581 aaPredicted RBP16.01■□□□□ 0.15
CSHL1-210ENST00000561003 CHIC2Q9UKJ5 165 aa16.01■□□□□ 0.15
CSHL1-210ENST00000561003 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
CSHL1-210ENST00000561003 EIF2AK4Q9P2K8 1649 aaKnown RBP16.01■□□□□ 0.15
CSHL1-210ENST00000561003 SLIT1O75093 1534 aa16■□□□□ 0.15
CSHL1-210ENST00000561003 ZC3H13Q5T200 1668 aaKnown RBP16■□□□□ 0.15
CSHL1-210ENST00000561003 IQGAP1P46940 1657 aa15.99■□□□□ 0.15
CSHL1-210ENST00000561003 SLC26A8Q96RN1 970 aa15.99■□□□□ 0.15
CSHL1-210ENST00000561003 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
CSHL1-210ENST00000561003 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSHL1-210ENST00000561003 SLAIN2Q9P270 581 aa15.96■□□□□ 0.15
CSHL1-210ENST00000561003 DAPK1P53355 1430 aa15.94■□□□□ 0.14
CSHL1-210ENST00000561003 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
CSHL1-210ENST00000561003 RGS17Q9UGC6 210 aaPredicted RBP15.94■□□□□ 0.14
CSHL1-210ENST00000561003 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
CSHL1-210ENST00000561003 TBX22Q9Y458 520 aa15.93■□□□□ 0.14
CSHL1-210ENST00000561003 FGD6Q6ZV73 1430 aa15.93■□□□□ 0.14
CSHL1-210ENST00000561003 SYNMO15061 1565 aa15.92■□□□□ 0.14
CSHL1-210ENST00000561003 MSH6P52701 1360 aa15.92■□□□□ 0.14
CSHL1-210ENST00000561003 ALKQ9UM73 1620 aa15.92■□□□□ 0.14
CSHL1-210ENST00000561003 MROH1Q8NDA8 1641 aa15.91■□□□□ 0.14
CSHL1-210ENST00000561003 PRDM15P57071 1507 aaPredicted RBP15.91■□□□□ 0.14
CSHL1-210ENST00000561003 EFCAB6Q5THR3 1501 aa15.9■□□□□ 0.14
CSHL1-210ENST00000561003 LMTK2Q8IWU2 1503 aa15.9■□□□□ 0.14
CSHL1-210ENST00000561003 NOS1P29475 1434 aa15.9■□□□□ 0.14
CSHL1-210ENST00000561003 UBR1Q8IWV7 1749 aa15.9■□□□□ 0.14
CSHL1-210ENST00000561003 C14orf37Q86TY3 774 aa15.89■□□□□ 0.13
CSHL1-210ENST00000561003 RBM33Q96EV2 1170 aaKnown RBP15.89■□□□□ 0.13
CSHL1-210ENST00000561003 NCOA3Q9Y6Q9 1424 aa15.87■□□□□ 0.13
CSHL1-210ENST00000561003 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
CSHL1-210ENST00000561003 POTEAQ6S8J7 498 aa15.87■□□□□ 0.13
CSHL1-210ENST00000561003 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
CSHL1-210ENST00000561003 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms