RNA–Protein interactions for RNA: ENST00000560993.1

SEMA4B-217, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-217ENST00000560993 RTEL1-TNFRSF6BF6WH68 1400 aa23.85■■□□□ 1.41
SEMA4B-217ENST00000560993 MTUS2Q5JR59 1369 aa23.85■■□□□ 1.41
SEMA4B-217ENST00000560993 ALKQ9UM73 1620 aa23.84■■□□□ 1.41
SEMA4B-217ENST00000560993 SHANK2Q9UPX8 1470 aa23.83■■□□□ 1.41
SEMA4B-217ENST00000560993 POLR1AO95602 1720 aaPredicted RBP23.82■■□□□ 1.4
SEMA4B-217ENST00000560993 TNRQ92752 1358 aa23.82■■□□□ 1.4
SEMA4B-217ENST00000560993 PIP4K2BP78356 416 aa23.82■■□□□ 1.4
SEMA4B-217ENST00000560993 MED1Q15648 1581 aaPredicted RBP23.82■■□□□ 1.4
SEMA4B-217ENST00000560993 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
SEMA4B-217ENST00000560993 VWDEQ8N2E2 1590 aa23.81■■□□□ 1.4
SEMA4B-217ENST00000560993 PZPP20742 1482 aa23.8■■□□□ 1.4
SEMA4B-217ENST00000560993 CPS1P31327 1500 aa23.79■■□□□ 1.4
SEMA4B-217ENST00000560993 KIF3BO15066 747 aa23.79■■□□□ 1.4
SEMA4B-217ENST00000560993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
SEMA4B-217ENST00000560993 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
SEMA4B-217ENST00000560993 TOM1O60784 492 aa23.75■■□□□ 1.39
SEMA4B-217ENST00000560993 MIA2Q96PC5 1412 aa23.75■■□□□ 1.39
SEMA4B-217ENST00000560993 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
SEMA4B-217ENST00000560993 KDM5DQ9BY66 1539 aa23.74■■□□□ 1.39
SEMA4B-217ENST00000560993 MED14O60244 1454 aa23.74■■□□□ 1.39
SEMA4B-217ENST00000560993 ANKLE2Q86XL3 938 aa23.73■■□□□ 1.39
SEMA4B-217ENST00000560993 STRCP1A6NGW2 1772 aa23.71■■□□□ 1.39
SEMA4B-217ENST00000560993 CCDC141Q6ZP82 1450 aa23.71■■□□□ 1.39
SEMA4B-217ENST00000560993 WASHC2CQ9Y4E1 1318 aa23.71■■□□□ 1.39
SEMA4B-217ENST00000560993 FAM135AQ9P2D6 1515 aa23.7■■□□□ 1.38
SEMA4B-217ENST00000560993 CAMSAP2Q08AD1 1489 aa23.69■■□□□ 1.38
SEMA4B-217ENST00000560993 NPHP4O75161 1426 aaPredicted RBP23.69■■□□□ 1.38
SEMA4B-217ENST00000560993 THEMISQ8N1K5 641 aaPredicted RBP23.69■■□□□ 1.38
SEMA4B-217ENST00000560993 DEPDC5O75140 1603 aa23.69■■□□□ 1.38
SEMA4B-217ENST00000560993 NLRP1Q9C000 1473 aa23.68■■□□□ 1.38
SEMA4B-217ENST00000560993 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
SEMA4B-217ENST00000560993 NCOA2Q15596 1464 aa23.67■■□□□ 1.38
SEMA4B-217ENST00000560993 LRRC7Q96NW7 1537 aa23.64■■□□□ 1.37
SEMA4B-217ENST00000560993 IQGAP1P46940 1657 aa23.63■■□□□ 1.37
SEMA4B-217ENST00000560993 RSPH4AQ5TD94 716 aa23.62■■□□□ 1.37
SEMA4B-217ENST00000560993 ARHGEF5Q12774 1597 aa23.61■■□□□ 1.37
SEMA4B-217ENST00000560993 ABCC3O15438 1527 aa23.6■■□□□ 1.37
SEMA4B-217ENST00000560993 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
SEMA4B-217ENST00000560993 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
SEMA4B-217ENST00000560993 ERVK-7P63135 1459 aa23.56■■□□□ 1.36
SEMA4B-217ENST00000560993 MROH1Q8NDA8 1641 aa23.56■■□□□ 1.36
SEMA4B-217ENST00000560993 RGS17Q9UGC6 210 aaPredicted RBP23.56■■□□□ 1.36
SEMA4B-217ENST00000560993 SENP3Q9H4L4 574 aaPredicted RBP23.55■■□□□ 1.36
SEMA4B-217ENST00000560993 TSPY4P0CV99 314 aa23.53■■□□□ 1.36
SEMA4B-217ENST00000560993 TSPY10P0CW01 314 aa23.53■■□□□ 1.36
SEMA4B-217ENST00000560993 LTKP29376 864 aa23.53■■□□□ 1.36
SEMA4B-217ENST00000560993 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
SEMA4B-217ENST00000560993 MAP3K1Q13233 1512 aa23.52■■□□□ 1.36
SEMA4B-217ENST00000560993 UBR1Q8IWV7 1749 aa23.51■■□□□ 1.35
SEMA4B-217ENST00000560993 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
SEMA4B-217ENST00000560993 MAST1Q9Y2H9 1570 aa23.51■■□□□ 1.35
SEMA4B-217ENST00000560993 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
SEMA4B-217ENST00000560993 SYNMO15061 1565 aa23.49■■□□□ 1.35
SEMA4B-217ENST00000560993 APLP2Q06481 763 aa23.49■■□□□ 1.35
SEMA4B-217ENST00000560993 ARHGAP23Q9P227 1491 aa23.48■■□□□ 1.35
SEMA4B-217ENST00000560993 CEP152O94986 1710 aa23.47■■□□□ 1.35
SEMA4B-217ENST00000560993 SCAF11Q99590 1463 aaKnown RBP23.46■■□□□ 1.35
SEMA4B-217ENST00000560993 EIF2AK4Q9P2K8 1649 aaKnown RBP23.46■■□□□ 1.35
SEMA4B-217ENST00000560993 SLIT1O75093 1534 aa23.44■■□□□ 1.34
SEMA4B-217ENST00000560993 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
SEMA4B-217ENST00000560993 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
SEMA4B-217ENST00000560993 TXNDC2Q86VQ3 553 aa23.41■■□□□ 1.34
SEMA4B-217ENST00000560993 ARHGAP31Q2M1Z3 1444 aa23.39■■□□□ 1.33
SEMA4B-217ENST00000560993 DUOX2Q9NRD8 1548 aa23.36■■□□□ 1.33
SEMA4B-217ENST00000560993 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
SEMA4B-217ENST00000560993 FAM135BQ49AJ0 1406 aa23.34■■□□□ 1.33
SEMA4B-217ENST00000560993 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
SEMA4B-217ENST00000560993 PIK3C2BO00750 1634 aa23.34■■□□□ 1.33
SEMA4B-217ENST00000560993 POTEAQ6S8J7 498 aa23.34■■□□□ 1.33
SEMA4B-217ENST00000560993 MYOM3Q5VTT5 1437 aa23.33■■□□□ 1.33
SEMA4B-217ENST00000560993 TMEM2Q9UHN6 1383 aa23.33■■□□□ 1.33
SEMA4B-217ENST00000560993 TMEM94Q12767 1356 aa23.3■■□□□ 1.32
SEMA4B-217ENST00000560993 KIF15Q9NS87 1388 aa23.3■■□□□ 1.32
SEMA4B-217ENST00000560993 ABCC5O15440 1437 aa23.3■■□□□ 1.32
SEMA4B-217ENST00000560993 TET3O43151 1660 aa23.29■■□□□ 1.32
SEMA4B-217ENST00000560993 RBM33Q96EV2 1170 aaKnown RBP23.29■■□□□ 1.32
SEMA4B-217ENST00000560993 IDI1Q13907 227 aa23.28■■□□□ 1.32
SEMA4B-217ENST00000560993 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
SEMA4B-217ENST00000560993 EID1Q9Y6B2 187 aa23.28■■□□□ 1.32
SEMA4B-217ENST00000560993 ERBINQ96RT1 1412 aa23.26■■□□□ 1.31
SEMA4B-217ENST00000560993 KCNA6P17658 529 aa23.26■■□□□ 1.31
SEMA4B-217ENST00000560993 SLC26A8Q96RN1 970 aa23.25■■□□□ 1.31
SEMA4B-217ENST00000560993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.31
SEMA4B-217ENST00000560993 ROBO1Q9Y6N7 1651 aa23.24■■□□□ 1.31
SEMA4B-217ENST00000560993 CROCC2H7BZ55 1655 aa23.23■■□□□ 1.31
SEMA4B-217ENST00000560993 EFCAB6Q5THR3 1501 aa23.23■■□□□ 1.31
SEMA4B-217ENST00000560993 KDM5AP29375 1690 aaKnown RBP23.22■■□□□ 1.31
SEMA4B-217ENST00000560993 LMTK2Q8IWU2 1503 aa23.2■■□□□ 1.3
SEMA4B-217ENST00000560993 NOS1P29475 1434 aa23.19■■□□□ 1.3
SEMA4B-217ENST00000560993 PROSER2Q86WR7 435 aaPredicted RBP23.19■■□□□ 1.3
SEMA4B-217ENST00000560993 DAPK1P53355 1430 aa23.17■■□□□ 1.3
SEMA4B-217ENST00000560993 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
SEMA4B-217ENST00000560993 NWD1Q149M9 1564 aa23.17■■□□□ 1.3
SEMA4B-217ENST00000560993 STAG3Q9UJ98 1225 aa23.16■■□□□ 1.3
SEMA4B-217ENST00000560993 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
SEMA4B-217ENST00000560993 SETD1AO15047 1707 aaKnown RBP23.13■■□□□ 1.29
SEMA4B-217ENST00000560993 SLAIN2Q9P270 581 aa23.12■■□□□ 1.29
SEMA4B-217ENST00000560993 CHIC2Q9UKJ5 165 aa23.12■■□□□ 1.29
SEMA4B-217ENST00000560993 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
SEMA4B-217ENST00000560993 KANK1Q14678 1352 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms