RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 POTEAQ6S8J7 498 aa15.86■□□□□ 0.13
HERC1-210ENST00000560897 INO80Q9ULG1 1556 aaPredicted RBP15.86■□□□□ 0.13
HERC1-210ENST00000560897 ADGBQ8N7X0 1667 aa15.86■□□□□ 0.13
HERC1-210ENST00000560897 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
HERC1-210ENST00000560897 LRRC7Q96NW7 1537 aa15.85■□□□□ 0.13
HERC1-210ENST00000560897 HNRNPMP52272 730 aaKnown RBP eCLIP15.85■□□□□ 0.13
HERC1-210ENST00000560897 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
HERC1-210ENST00000560897 MED14O60244 1454 aa15.84■□□□□ 0.13
HERC1-210ENST00000560897 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
HERC1-210ENST00000560897 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
HERC1-210ENST00000560897 SETD1AO15047 1707 aaKnown RBP15.84■□□□□ 0.13
HERC1-210ENST00000560897 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
HERC1-210ENST00000560897 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.12
HERC1-210ENST00000560897 PZPP20742 1482 aa15.81■□□□□ 0.12
HERC1-210ENST00000560897 NLRP1Q9C000 1473 aa15.81■□□□□ 0.12
HERC1-210ENST00000560897 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
HERC1-210ENST00000560897 KIAA1107Q9UPP5 1409 aa15.8■□□□□ 0.12
HERC1-210ENST00000560897 FBXO31Q5XUX0 539 aaPredicted RBP15.8■□□□□ 0.12
HERC1-210ENST00000560897 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
HERC1-210ENST00000560897 KDM5DQ9BY66 1539 aa15.78■□□□□ 0.12
HERC1-210ENST00000560897 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.12
HERC1-210ENST00000560897 GPATCH8Q9UKJ3 1502 aaKnown RBP15.76■□□□□ 0.11
HERC1-210ENST00000560897 MIA2Q96PC5 1412 aa15.76■□□□□ 0.11
HERC1-210ENST00000560897 WASHC2CQ9Y4E1 1318 aa15.75■□□□□ 0.11
HERC1-210ENST00000560897 FAM135BQ49AJ0 1406 aa15.74■□□□□ 0.11
HERC1-210ENST00000560897 CASKIN1Q8WXD9 1431 aa15.74■□□□□ 0.11
HERC1-210ENST00000560897 KIF3BO15066 747 aa15.73■□□□□ 0.11
HERC1-210ENST00000560897 DHX29Q7Z478 1369 aaKnown RBP15.72■□□□□ 0.11
HERC1-210ENST00000560897 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
HERC1-210ENST00000560897 UPF1Q92900 1129 aaKnown RBP eCLIP15.7■□□□□ 0.1
HERC1-210ENST00000560897 ZC3H13Q5T200 1668 aaKnown RBP15.69■□□□□ 0.1
HERC1-210ENST00000560897 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
HERC1-210ENST00000560897 ROBO1Q9Y6N7 1651 aa15.68■□□□□ 0.1
HERC1-210ENST00000560897 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
HERC1-210ENST00000560897 SCAF11Q99590 1463 aaKnown RBP15.66■□□□□ 0.1
HERC1-210ENST00000560897 FYCO1Q9BQS8 1478 aa15.66■□□□□ 0.1
HERC1-210ENST00000560897 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
HERC1-210ENST00000560897 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
HERC1-210ENST00000560897 MEX3CQ5U5Q3 659 aaKnown RBP15.64■□□□□ 0.09
HERC1-210ENST00000560897 JCADQ9P266 1359 aa15.63■□□□□ 0.09
HERC1-210ENST00000560897 ZNF772Q68DY9 489 aaPredicted RBP15.63■□□□□ 0.09
HERC1-210ENST00000560897 PHLPP1O60346 1717 aa15.62■□□□□ 0.09
HERC1-210ENST00000560897 TXNDC2Q86VQ3 553 aa15.61■□□□□ 0.09
HERC1-210ENST00000560897 EID1Q9Y6B2 187 aa15.61■□□□□ 0.09
HERC1-210ENST00000560897 TMEM94Q12767 1356 aa15.61■□□□□ 0.09
HERC1-210ENST00000560897 UBR1Q8IWV7 1749 aa15.6■□□□□ 0.09
HERC1-210ENST00000560897 MTUS2Q5JR59 1369 aa15.6■□□□□ 0.09
HERC1-210ENST00000560897 MBD5Q9P267 1494 aa15.59■□□□□ 0.09
HERC1-210ENST00000560897 ZNF644Q9H582 1327 aaPredicted RBP15.59■□□□□ 0.09
HERC1-210ENST00000560897 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
HERC1-210ENST00000560897 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
HERC1-210ENST00000560897 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
HERC1-210ENST00000560897 RXRBP28702 533 aa15.56■□□□□ 0.08
HERC1-210ENST00000560897 LTKP29376 864 aa15.56■□□□□ 0.08
HERC1-210ENST00000560897 MSH6P52701 1360 aa15.56■□□□□ 0.08
HERC1-210ENST00000560897 CFAP65Q6ZU64 1925 aaKnown RBP15.56■□□□□ 0.08
HERC1-210ENST00000560897 TIAM1Q13009 1591 aa15.55■□□□□ 0.08
HERC1-210ENST00000560897 ABCC3O15438 1527 aa15.55■□□□□ 0.08
HERC1-210ENST00000560897 SLIT1O75093 1534 aa15.55■□□□□ 0.08
HERC1-210ENST00000560897 SPATA31A6Q5VVP1 1343 aa15.55■□□□□ 0.08
HERC1-210ENST00000560897 ARHGAP23Q9P227 1491 aa15.54■□□□□ 0.08
HERC1-210ENST00000560897 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
HERC1-210ENST00000560897 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
HERC1-210ENST00000560897 KCNA6P17658 529 aa15.53■□□□□ 0.08
HERC1-210ENST00000560897 FOXD1Q16676 465 aa15.53■□□□□ 0.08
HERC1-210ENST00000560897 NCOA2Q15596 1464 aa15.52■□□□□ 0.08
HERC1-210ENST00000560897 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
HERC1-210ENST00000560897 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
HERC1-210ENST00000560897 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
HERC1-210ENST00000560897 RBM33Q96EV2 1170 aaKnown RBP15.51■□□□□ 0.07
HERC1-210ENST00000560897 SLAIN2Q9P270 581 aa15.51■□□□□ 0.07
HERC1-210ENST00000560897 SRCAPQ6ZRS2 3230 aa15.51■□□□□ 0.07
HERC1-210ENST00000560897 CDK12Q9NYV4 1490 aaPredicted RBP15.51■□□□□ 0.07
HERC1-210ENST00000560897 FGD6Q6ZV73 1430 aa15.51■□□□□ 0.07
HERC1-210ENST00000560897 LRP6O75581 1613 aa15.5■□□□□ 0.07
HERC1-210ENST00000560897 PRDM15P57071 1507 aaPredicted RBP15.5■□□□□ 0.07
HERC1-210ENST00000560897 NKTRP30414 1462 aaKnown RBP15.5■□□□□ 0.07
HERC1-210ENST00000560897 COL16A1Q07092 1604 aaPredicted RBP15.5■□□□□ 0.07
HERC1-210ENST00000560897 EHBP1L1Q8N3D4 1523 aa15.49■□□□□ 0.07
HERC1-210ENST00000560897 CEP152O94986 1710 aa15.48■□□□□ 0.07
HERC1-210ENST00000560897 CAMSAP2Q08AD1 1489 aa15.48■□□□□ 0.07
HERC1-210ENST00000560897 TMEM2Q9UHN6 1383 aa15.48■□□□□ 0.07
HERC1-210ENST00000560897 EIF2AK4Q9P2K8 1649 aaKnown RBP15.46■□□□□ 0.07
HERC1-210ENST00000560897 BCANQ96GW7 911 aa15.46■□□□□ 0.07
HERC1-210ENST00000560897 SHPRHQ149N8 1683 aa15.45■□□□□ 0.06
HERC1-210ENST00000560897 SLC26A8Q96RN1 970 aa15.45■□□□□ 0.06
HERC1-210ENST00000560897 PIK3C2BO00750 1634 aa15.44■□□□□ 0.06
HERC1-210ENST00000560897 NUTM2BA6NNL0 878 aaPredicted RBP15.44■□□□□ 0.06
HERC1-210ENST00000560897 NUTM2EB1AL46 878 aaPredicted RBP15.44■□□□□ 0.06
HERC1-210ENST00000560897 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
HERC1-210ENST00000560897 NUTM2AQ8IVF1 878 aaPredicted RBP15.44■□□□□ 0.06
HERC1-210ENST00000560897 NWD1Q149M9 1564 aa15.44■□□□□ 0.06
HERC1-210ENST00000560897 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
HERC1-210ENST00000560897 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
HERC1-210ENST00000560897 ARHGEF5Q12774 1597 aa15.43■□□□□ 0.06
HERC1-210ENST00000560897 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
HERC1-210ENST00000560897 EFCAB6Q5THR3 1501 aa15.42■□□□□ 0.06
HERC1-210ENST00000560897 KDM5AP29375 1690 aaKnown RBP15.41■□□□□ 0.06
HERC1-210ENST00000560897 AFF2P51816 1311 aa15.41■□□□□ 0.06
HERC1-210ENST00000560897 AHDC1Q5TGY3 1603 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms