RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
IRF9-211ENST00000560852 RNF17Q9BXT8 1623 aaKnown RBP18.24■□□□□ 0.51
IRF9-211ENST00000560852 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
IRF9-211ENST00000560852 DEPDC5O75140 1603 aa18.22■□□□□ 0.51
IRF9-211ENST00000560852 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
IRF9-211ENST00000560852 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
IRF9-211ENST00000560852 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
IRF9-211ENST00000560852 GGT6Q6P531 493 aa18.2■□□□□ 0.5
IRF9-211ENST00000560852 SETD5Q9C0A6 1442 aa18.2■□□□□ 0.5
IRF9-211ENST00000560852 LMTK2Q8IWU2 1503 aa18.19■□□□□ 0.5
IRF9-211ENST00000560852 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
IRF9-211ENST00000560852 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
IRF9-211ENST00000560852 MLECQ14165 292 aa18.15■□□□□ 0.5
IRF9-211ENST00000560852 UNC13BO14795 1591 aa18.15■□□□□ 0.5
IRF9-211ENST00000560852 WASHC2CQ9Y4E1 1318 aa18.15■□□□□ 0.5
IRF9-211ENST00000560852 ZMYM3Q14202 1370 aa18.15■□□□□ 0.5
IRF9-211ENST00000560852 KANK1Q14678 1352 aa18.15■□□□□ 0.5
IRF9-211ENST00000560852 ABCC3O15438 1527 aa18.13■□□□□ 0.49
IRF9-211ENST00000560852 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
IRF9-211ENST00000560852 PTPRMP28827 1452 aa18.12■□□□□ 0.49
IRF9-211ENST00000560852 MROH2AA6NES4 1674 aa18.12■□□□□ 0.49
IRF9-211ENST00000560852 NUP155O75694 1391 aa18.11■□□□□ 0.49
IRF9-211ENST00000560852 MADDQ8WXG6 1647 aa18.11■□□□□ 0.49
IRF9-211ENST00000560852 ZC3H13Q5T200 1668 aaKnown RBP18.11■□□□□ 0.49
IRF9-211ENST00000560852 RAB3GAP2Q9H2M9 1393 aa18.1■□□□□ 0.49
IRF9-211ENST00000560852 NPATQ14207 1427 aa18.09■□□□□ 0.49
IRF9-211ENST00000560852 PZPP20742 1482 aa18.07■□□□□ 0.48
IRF9-211ENST00000560852 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
IRF9-211ENST00000560852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.486e-10■■■□□ 17.2
IRF9-211ENST00000560852 IQGAP3Q86VI3 1631 aa18.07■□□□□ 0.48
IRF9-211ENST00000560852 FER1L4A9Z1Z3 1794 aa18.06■□□□□ 0.48
IRF9-211ENST00000560852 EFCAB6Q5THR3 1501 aa18.03■□□□□ 0.48
IRF9-211ENST00000560852 NOS1P29475 1434 aa18.02■□□□□ 0.48
IRF9-211ENST00000560852 CLTCQ00610 1675 aaKnown RBP18.02■□□□□ 0.47
IRF9-211ENST00000560852 CEBPAP49715 358 aaPredicted RBP18.01■□□□□ 0.47
IRF9-211ENST00000560852 MPHOSPH9Q99550 1183 aa18.01■□□□□ 0.47
IRF9-211ENST00000560852 TET3O43151 1660 aa18.01■□□□□ 0.47
IRF9-211ENST00000560852 RIMS1Q86UR5 1692 aaKnown RBP18.01■□□□□ 0.47
IRF9-211ENST00000560852 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
IRF9-211ENST00000560852 PTPRTO14522 1441 aa18■□□□□ 0.47
IRF9-211ENST00000560852 TRIM52Q96A61 297 aa18■□□□□ 0.47
IRF9-211ENST00000560852 C3P01024 1663 aa17.99■□□□□ 0.47
IRF9-211ENST00000560852 CAMSAP1Q5T5Y3 1602 aa17.99■□□□□ 0.47
IRF9-211ENST00000560852 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
IRF9-211ENST00000560852 ERVK-7P63135 1459 aa17.97■□□□□ 0.47
IRF9-211ENST00000560852 FBXO31Q5XUX0 539 aaPredicted RBP17.97■□□□□ 0.47
IRF9-211ENST00000560852 SLC52A1Q9NWF4 448 aa17.97■□□□□ 0.47
IRF9-211ENST00000560852 CEP152O94986 1710 aa17.95■□□□□ 0.46
IRF9-211ENST00000560852 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
IRF9-211ENST00000560852 PKD2Q13563 968 aa17.95■□□□□ 0.46
IRF9-211ENST00000560852 TNRQ92752 1358 aa17.94■□□□□ 0.46
IRF9-211ENST00000560852 NLRP1Q9C000 1473 aa17.94■□□□□ 0.46
IRF9-211ENST00000560852 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
IRF9-211ENST00000560852 PLA2R1Q13018 1463 aa17.93■□□□□ 0.46
IRF9-211ENST00000560852 E9PCH4 1651 aa17.91■□□□□ 0.46
IRF9-211ENST00000560852 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.45
IRF9-211ENST00000560852 IDI1Q13907 227 aa17.88■□□□□ 0.45
IRF9-211ENST00000560852 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
IRF9-211ENST00000560852 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
IRF9-211ENST00000560852 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
IRF9-211ENST00000560852 TRPM2O94759 1503 aa17.87■□□□□ 0.45
IRF9-211ENST00000560852 SYNMO15061 1565 aa17.87■□□□□ 0.45
IRF9-211ENST00000560852 PIK3C2BO00750 1634 aa17.85■□□□□ 0.45
IRF9-211ENST00000560852 LMTK3Q96Q04 1460 aa17.85■□□□□ 0.45
IRF9-211ENST00000560852 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
IRF9-211ENST00000560852 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
IRF9-211ENST00000560852 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.45
IRF9-211ENST00000560852 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
IRF9-211ENST00000560852 NEURL4Q96JN8 1562 aa17.82■□□□□ 0.44
IRF9-211ENST00000560852 ZNF142P52746 1687 aaPredicted RBP17.81■□□□□ 0.44
IRF9-211ENST00000560852 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
IRF9-211ENST00000560852 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
IRF9-211ENST00000560852 FOXD1Q16676 465 aa17.8■□□□□ 0.44
IRF9-211ENST00000560852 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
IRF9-211ENST00000560852 SPHKAPQ2M3C7 1700 aa17.79■□□□□ 0.44
IRF9-211ENST00000560852 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
IRF9-211ENST00000560852 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
IRF9-211ENST00000560852 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
IRF9-211ENST00000560852 UGGT1Q9NYU2 1555 aa17.78■□□□□ 0.44
IRF9-211ENST00000560852 SLIT1O75093 1534 aa17.77■□□□□ 0.43
IRF9-211ENST00000560852 TMEM2Q9UHN6 1383 aa17.76■□□□□ 0.43
IRF9-211ENST00000560852 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
IRF9-211ENST00000560852 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
IRF9-211ENST00000560852 SPATA31E1Q6ZUB1 1445 aa17.75■□□□□ 0.43
IRF9-211ENST00000560852 ADGRB3O60242 1522 aa17.75■□□□□ 0.43
IRF9-211ENST00000560852 STAC3Q96MF2 364 aa17.74■□□□□ 0.43
IRF9-211ENST00000560852 CLTCL1P53675 1640 aa17.73■□□□□ 0.43
IRF9-211ENST00000560852 UBR1Q8IWV7 1749 aa17.73■□□□□ 0.43
IRF9-211ENST00000560852 HDGFP51858 240 aaKnown RBP17.73■□□□□ 0.43
IRF9-211ENST00000560852 ZFYVE9O95405 1425 aa17.72■□□□□ 0.43
IRF9-211ENST00000560852 MED14O60244 1454 aa17.71■□□□□ 0.43
IRF9-211ENST00000560852 CFAP65Q6ZU64 1925 aaKnown RBP17.71■□□□□ 0.43
IRF9-211ENST00000560852 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
IRF9-211ENST00000560852 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.7■□□□□ 0.42
IRF9-211ENST00000560852 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
IRF9-211ENST00000560852 HSPA2P54652 639 aa17.68■□□□□ 0.42
IRF9-211ENST00000560852 LTKP29376 864 aa17.67■□□□□ 0.42
IRF9-211ENST00000560852 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
IRF9-211ENST00000560852 EID1Q9Y6B2 187 aa17.66■□□□□ 0.42
IRF9-211ENST00000560852 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms