RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 CEP170BQ9Y4F5 1589 aaPredicted RBP12.24□□□□□ -0.45
CPNE6-218ENST00000560845 MYOM3Q5VTT5 1437 aa12.22□□□□□ -0.45
CPNE6-218ENST00000560845 GGT6Q6P531 493 aa12.22□□□□□ -0.45
CPNE6-218ENST00000560845 FGD6Q6ZV73 1430 aa12.21□□□□□ -0.45
CPNE6-218ENST00000560845 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
CPNE6-218ENST00000560845 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
CPNE6-218ENST00000560845 A2ML1A8K2U0 1454 aa12.19□□□□□ -0.46
CPNE6-218ENST00000560845 MBD5Q9P267 1494 aa12.19□□□□□ -0.46
CPNE6-218ENST00000560845 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
CPNE6-218ENST00000560845 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
CPNE6-218ENST00000560845 RTEL1-TNFRSF6BF6WH68 1400 aa12.17□□□□□ -0.46
CPNE6-218ENST00000560845 DHX29Q7Z478 1369 aaKnown RBP12.16□□□□□ -0.46
CPNE6-218ENST00000560845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.16□□□□□ -0.46
CPNE6-218ENST00000560845 DNMT1P26358 1616 aaKnown RBP12.15□□□□□ -0.46
CPNE6-218ENST00000560845 MIA2Q96PC5 1412 aa12.15□□□□□ -0.46
CPNE6-218ENST00000560845 TNRQ92752 1358 aa12.15□□□□□ -0.46
CPNE6-218ENST00000560845 PTPN23Q9H3S7 1636 aa12.15□□□□□ -0.47
CPNE6-218ENST00000560845 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
CPNE6-218ENST00000560845 PZPP20742 1482 aa12.14□□□□□ -0.47
CPNE6-218ENST00000560845 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
CPNE6-218ENST00000560845 KDM5DQ9BY66 1539 aa12.13□□□□□ -0.47
CPNE6-218ENST00000560845 FAM135AQ9P2D6 1515 aa12.13□□□□□ -0.47
CPNE6-218ENST00000560845 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
CPNE6-218ENST00000560845 CPS1P31327 1500 aa12.12□□□□□ -0.47
CPNE6-218ENST00000560845 KIF3BO15066 747 aa12.12□□□□□ -0.47
CPNE6-218ENST00000560845 FBXO31Q5XUX0 539 aaPredicted RBP12.12□□□□□ -0.47
CPNE6-218ENST00000560845 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
CPNE6-218ENST00000560845 SHANK2Q9UPX8 1470 aa12.11□□□□□ -0.47
CPNE6-218ENST00000560845 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
CPNE6-218ENST00000560845 HSPA1LP34931 641 aa12.1□□□□□ -0.47
CPNE6-218ENST00000560845 PIP4K2BP78356 416 aa12.1□□□□□ -0.47
CPNE6-218ENST00000560845 POLR1AO95602 1720 aaPredicted RBP12.1□□□□□ -0.47
CPNE6-218ENST00000560845 TOM1O60784 492 aa12.09□□□□□ -0.47
CPNE6-218ENST00000560845 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
CPNE6-218ENST00000560845 WASHC2CQ9Y4E1 1318 aa12.09□□□□□ -0.47
CPNE6-218ENST00000560845 NLRP1Q9C000 1473 aa12.08□□□□□ -0.47
CPNE6-218ENST00000560845 ITGAEP38570 1179 aa12.08□□□□□ -0.48
CPNE6-218ENST00000560845 ANKLE2Q86XL3 938 aa12.08□□□□□ -0.48
CPNE6-218ENST00000560845 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
CPNE6-218ENST00000560845 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
CPNE6-218ENST00000560845 RSPH4AQ5TD94 716 aa12.07□□□□□ -0.48
CPNE6-218ENST00000560845 UGGT1Q9NYU2 1555 aa12.07□□□□□ -0.48
CPNE6-218ENST00000560845 THEMISQ8N1K5 641 aaPredicted RBP12.06□□□□□ -0.48
CPNE6-218ENST00000560845 MED14O60244 1454 aa12.06□□□□□ -0.48
CPNE6-218ENST00000560845 ARHGEF5Q12774 1597 aa12.05□□□□□ -0.48
CPNE6-218ENST00000560845 DEPDC5O75140 1603 aa12.05□□□□□ -0.48
CPNE6-218ENST00000560845 ALKQ9UM73 1620 aa12.04□□□□□ -0.48
CPNE6-218ENST00000560845 ABCC3O15438 1527 aa12.03□□□□□ -0.48
CPNE6-218ENST00000560845 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
CPNE6-218ENST00000560845 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
CPNE6-218ENST00000560845 DAPK1P53355 1430 aa12.03□□□□□ -0.48
CPNE6-218ENST00000560845 RNF17Q9BXT8 1623 aaKnown RBP12.02□□□□□ -0.49
CPNE6-218ENST00000560845 IQGAP1P46940 1657 aa12.02□□□□□ -0.49
CPNE6-218ENST00000560845 ERVK-7P63135 1459 aa12.02□□□□□ -0.49
CPNE6-218ENST00000560845 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
CPNE6-218ENST00000560845 ABCC5O15440 1437 aa12□□□□□ -0.49
CPNE6-218ENST00000560845 SETD5Q9C0A6 1442 aa12□□□□□ -0.49
CPNE6-218ENST00000560845 LRRC7Q96NW7 1537 aa12□□□□□ -0.49
CPNE6-218ENST00000560845 MAST1Q9Y2H9 1570 aa12□□□□□ -0.49
CPNE6-218ENST00000560845 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
CPNE6-218ENST00000560845 PHF23Q9BUL5 403 aaPredicted RBP11.99□□□□□ -0.49
CPNE6-218ENST00000560845 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
CPNE6-218ENST00000560845 SYNMO15061 1565 aa11.99□□□□□ -0.49
CPNE6-218ENST00000560845 MROH1Q8NDA8 1641 aa11.98□□□□□ -0.49
CPNE6-218ENST00000560845 EIF2AK4Q9P2K8 1649 aaKnown RBP11.98□□□□□ -0.49
CPNE6-218ENST00000560845 RAB3GAP2Q9H2M9 1393 aa11.98□□□□□ -0.49
CPNE6-218ENST00000560845 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
CPNE6-218ENST00000560845 SCAF11Q99590 1463 aaKnown RBP11.97□□□□□ -0.49
CPNE6-218ENST00000560845 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
CPNE6-218ENST00000560845 ROCK1Q13464 1354 aa11.96□□□□□ -0.49
CPNE6-218ENST00000560845 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
CPNE6-218ENST00000560845 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
CPNE6-218ENST00000560845 ADGRL2O95490 1459 aa11.95□□□□□ -0.5
CPNE6-218ENST00000560845 NAIPQ13075 1403 aa11.95□□□□□ -0.5
CPNE6-218ENST00000560845 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
CPNE6-218ENST00000560845 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
CPNE6-218ENST00000560845 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
CPNE6-218ENST00000560845 UBR1Q8IWV7 1749 aa11.94□□□□□ -0.5
CPNE6-218ENST00000560845 SLIT1O75093 1534 aa11.93□□□□□ -0.5
CPNE6-218ENST00000560845 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
CPNE6-218ENST00000560845 CEP152O94986 1710 aa11.93□□□□□ -0.5
CPNE6-218ENST00000560845 PRDM15P57071 1507 aaPredicted RBP11.92□□□□□ -0.5
CPNE6-218ENST00000560845 LTKP29376 864 aa11.92□□□□□ -0.5
CPNE6-218ENST00000560845 ARHGAP31Q2M1Z3 1444 aa11.92□□□□□ -0.5
CPNE6-218ENST00000560845 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
CPNE6-218ENST00000560845 TXNDC2Q86VQ3 553 aa11.91□□□□□ -0.5
CPNE6-218ENST00000560845 RRP7BPQ9NSQ0 103 aa11.91□□□□□ -0.5
CPNE6-218ENST00000560845 DHX57Q6P158 1386 aaKnown RBP11.91□□□□□ -0.5
CPNE6-218ENST00000560845 ANKRD30AQ9BXX3 1397 aa11.91□□□□□ -0.5
CPNE6-218ENST00000560845 ERBINQ96RT1 1412 aa11.9□□□□□ -0.5
CPNE6-218ENST00000560845 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
CPNE6-218ENST00000560845 TMEM2Q9UHN6 1383 aa11.89□□□□□ -0.51
CPNE6-218ENST00000560845 PIK3C2BO00750 1634 aa11.87□□□□□ -0.51
CPNE6-218ENST00000560845 RGS17Q9UGC6 210 aaPredicted RBP11.87□□□□□ -0.51
CPNE6-218ENST00000560845 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
CPNE6-218ENST00000560845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
CPNE6-218ENST00000560845 EFCAB6Q5THR3 1501 aa11.86□□□□□ -0.51
CPNE6-218ENST00000560845 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
CPNE6-218ENST00000560845 KANK1Q14678 1352 aa11.85□□□□□ -0.51
CPNE6-218ENST00000560845 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms