RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 SHANK2Q9UPX8 1470 aa12.35□□□□□ -0.43
APH1B-209ENST00000560716 KCNA4P22459 653 aa12.35□□□□□ -0.43
APH1B-209ENST00000560716 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
APH1B-209ENST00000560716 PZPP20742 1482 aa12.33□□□□□ -0.44
APH1B-209ENST00000560716 TOM1O60784 492 aa12.32□□□□□ -0.44
APH1B-209ENST00000560716 HSPA1LP34931 641 aa12.31□□□□□ -0.44
APH1B-209ENST00000560716 HNRNPMP52272 730 aaKnown RBP eCLIP12.31□□□□□ -0.44
APH1B-209ENST00000560716 SYNMO15061 1565 aa12.3□□□□□ -0.44
APH1B-209ENST00000560716 NLRP1Q9C000 1473 aa12.3□□□□□ -0.44
APH1B-209ENST00000560716 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
APH1B-209ENST00000560716 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
APH1B-209ENST00000560716 STRCP1A6NGW2 1772 aa12.3□□□□□ -0.44
APH1B-209ENST00000560716 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
APH1B-209ENST00000560716 TIAM1Q13009 1591 aa12.29□□□□□ -0.44
APH1B-209ENST00000560716 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
APH1B-209ENST00000560716 TNRQ92752 1358 aa12.28□□□□□ -0.44
APH1B-209ENST00000560716 RNF17Q9BXT8 1623 aaKnown RBP12.27□□□□□ -0.44
APH1B-209ENST00000560716 ZC3H13Q5T200 1668 aaKnown RBP12.27□□□□□ -0.45
APH1B-209ENST00000560716 CFDP1Q9UEE9 299 aaPredicted RBP12.27□□□□□ -0.45
APH1B-209ENST00000560716 GGT6Q6P531 493 aa12.26□□□□□ -0.45
APH1B-209ENST00000560716 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
APH1B-209ENST00000560716 ZNF777Q9ULD5 760 aaPredicted RBP12.25□□□□□ -0.45
APH1B-209ENST00000560716 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
APH1B-209ENST00000560716 UGGT1Q9NYU2 1555 aa12.25□□□□□ -0.45
APH1B-209ENST00000560716 NPHP4O75161 1426 aaPredicted RBP12.24□□□□□ -0.45
APH1B-209ENST00000560716 XIRP1Q702N8 1843 aaKnown RBP12.24□□□□□ -0.45
APH1B-209ENST00000560716 ANKLE2Q86XL3 938 aa12.24□□□□□ -0.45
APH1B-209ENST00000560716 THEMISQ8N1K5 641 aaPredicted RBP12.24□□□□□ -0.45
APH1B-209ENST00000560716 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
APH1B-209ENST00000560716 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
APH1B-209ENST00000560716 ARHGEF5Q12774 1597 aa12.23□□□□□ -0.45
APH1B-209ENST00000560716 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
APH1B-209ENST00000560716 RSPH4AQ5TD94 716 aa12.23□□□□□ -0.45
APH1B-209ENST00000560716 UBR1Q8IWV7 1749 aa12.22□□□□□ -0.45
APH1B-209ENST00000560716 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
APH1B-209ENST00000560716 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.45
APH1B-209ENST00000560716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.2□□□□□ -0.46
APH1B-209ENST00000560716 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
APH1B-209ENST00000560716 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
APH1B-209ENST00000560716 MAST1Q9Y2H9 1570 aa12.2□□□□□ -0.46
APH1B-209ENST00000560716 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
APH1B-209ENST00000560716 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
APH1B-209ENST00000560716 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
APH1B-209ENST00000560716 ARHGAP23Q9P227 1491 aa12.18□□□□□ -0.46
APH1B-209ENST00000560716 ABCC3O15438 1527 aa12.17□□□□□ -0.46
APH1B-209ENST00000560716 SLIT1O75093 1534 aa12.17□□□□□ -0.46
APH1B-209ENST00000560716 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
APH1B-209ENST00000560716 MROH1Q8NDA8 1641 aa12.17□□□□□ -0.46
APH1B-209ENST00000560716 WASHC2CQ9Y4E1 1318 aa12.16□□□□□ -0.46
APH1B-209ENST00000560716 KIF3BO15066 747 aa12.16□□□□□ -0.46
APH1B-209ENST00000560716 RGS17Q9UGC6 210 aaPredicted RBP12.16□□□□□ -0.46
APH1B-209ENST00000560716 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
APH1B-209ENST00000560716 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
APH1B-209ENST00000560716 FAM135BQ49AJ0 1406 aa12.14□□□□□ -0.47
APH1B-209ENST00000560716 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
APH1B-209ENST00000560716 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
APH1B-209ENST00000560716 ARHGAP31Q2M1Z3 1444 aa12.12□□□□□ -0.47
APH1B-209ENST00000560716 CEP152O94986 1710 aa12.12□□□□□ -0.47
APH1B-209ENST00000560716 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
APH1B-209ENST00000560716 CFAP65Q6ZU64 1925 aaKnown RBP12.11□□□□□ -0.47
APH1B-209ENST00000560716 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
APH1B-209ENST00000560716 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
APH1B-209ENST00000560716 TET3O43151 1660 aa12.08□□□□□ -0.48
APH1B-209ENST00000560716 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
APH1B-209ENST00000560716 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
APH1B-209ENST00000560716 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
APH1B-209ENST00000560716 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
APH1B-209ENST00000560716 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
APH1B-209ENST00000560716 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
APH1B-209ENST00000560716 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
APH1B-209ENST00000560716 PIK3C2BO00750 1634 aa12.06□□□□□ -0.48
APH1B-209ENST00000560716 LTKP29376 864 aa12.05□□□□□ -0.48
APH1B-209ENST00000560716 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
APH1B-209ENST00000560716 LMTK2Q8IWU2 1503 aa12.03□□□□□ -0.48
APH1B-209ENST00000560716 POTEAQ6S8J7 498 aa12.03□□□□□ -0.48
APH1B-209ENST00000560716 CROCC2H7BZ55 1655 aa12.03□□□□□ -0.48
APH1B-209ENST00000560716 TMEM2Q9UHN6 1383 aa12.03□□□□□ -0.48
APH1B-209ENST00000560716 CHD2O14647 1828 aaKnown RBP12.02□□□□□ -0.48
APH1B-209ENST00000560716 ERBINQ96RT1 1412 aa12.02□□□□□ -0.49
APH1B-209ENST00000560716 TXNDC2Q86VQ3 553 aa12.01□□□□□ -0.49
APH1B-209ENST00000560716 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
APH1B-209ENST00000560716 PHLPP1O60346 1717 aa12□□□□□ -0.49
APH1B-209ENST00000560716 KCNA6P17658 529 aa12□□□□□ -0.49
APH1B-209ENST00000560716 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
APH1B-209ENST00000560716 EID1Q9Y6B2 187 aa11.99□□□□□ -0.49
APH1B-209ENST00000560716 TMEM94Q12767 1356 aa11.99□□□□□ -0.49
APH1B-209ENST00000560716 MYOM3Q5VTT5 1437 aa11.99□□□□□ -0.49
APH1B-209ENST00000560716 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
APH1B-209ENST00000560716 NCOA3Q9Y6Q9 1424 aa11.98□□□□□ -0.49
APH1B-209ENST00000560716 SHPRHQ149N8 1683 aa11.97□□□□□ -0.49
APH1B-209ENST00000560716 NOS1P29475 1434 aa11.97□□□□□ -0.49
APH1B-209ENST00000560716 ADGRB3O60242 1522 aa11.96□□□□□ -0.49
APH1B-209ENST00000560716 FGD6Q6ZV73 1430 aa11.96□□□□□ -0.49
APH1B-209ENST00000560716 JCADQ9P266 1359 aa11.96□□□□□ -0.49
APH1B-209ENST00000560716 AHDC1Q5TGY3 1603 aaPredicted RBP11.94□□□□□ -0.5
APH1B-209ENST00000560716 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
APH1B-209ENST00000560716 CDK12Q9NYV4 1490 aaPredicted RBP11.93□□□□□ -0.5
APH1B-209ENST00000560716 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
APH1B-209ENST00000560716 RPRD2Q5VT52 1461 aaKnown RBP11.92□□□□□ -0.5
APH1B-209ENST00000560716 IDI1Q13907 227 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms