RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
TPM1-225ENST00000560679 KDM5DQ9BY66 1539 aa16.29■□□□□ 0.2
TPM1-225ENST00000560679 PZPP20742 1482 aa16.29■□□□□ 0.2
TPM1-225ENST00000560679 TNRQ92752 1358 aa16.29■□□□□ 0.2
TPM1-225ENST00000560679 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
TPM1-225ENST00000560679 ZNF644Q9H582 1327 aaPredicted RBP16.28■□□□□ 0.2
TPM1-225ENST00000560679 FAM135AQ9P2D6 1515 aa16.28■□□□□ 0.2
TPM1-225ENST00000560679 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
TPM1-225ENST00000560679 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
TPM1-225ENST00000560679 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
TPM1-225ENST00000560679 DEPDC5O75140 1603 aa16.27■□□□□ 0.19
TPM1-225ENST00000560679 STRCP1A6NGW2 1772 aa16.26■□□□□ 0.19
TPM1-225ENST00000560679 DHX29Q7Z478 1369 aaKnown RBP16.26■□□□□ 0.19
TPM1-225ENST00000560679 MED14O60244 1454 aa16.25■□□□□ 0.19
TPM1-225ENST00000560679 TOM1O60784 492 aa16.25■□□□□ 0.19
TPM1-225ENST00000560679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM1-225ENST00000560679 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
TPM1-225ENST00000560679 MTUS2Q5JR59 1369 aa16.24■□□□□ 0.19
TPM1-225ENST00000560679 IQGAP1P46940 1657 aa16.23■□□□□ 0.19
TPM1-225ENST00000560679 NLRP1Q9C000 1473 aa16.22■□□□□ 0.19
TPM1-225ENST00000560679 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
TPM1-225ENST00000560679 NPHP4O75161 1426 aaPredicted RBP16.22■□□□□ 0.19
TPM1-225ENST00000560679 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
TPM1-225ENST00000560679 SYNMO15061 1565 aa16.21■□□□□ 0.19
TPM1-225ENST00000560679 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
TPM1-225ENST00000560679 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
TPM1-225ENST00000560679 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
TPM1-225ENST00000560679 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
TPM1-225ENST00000560679 CAMSAP2Q08AD1 1489 aa16.19■□□□□ 0.18
TPM1-225ENST00000560679 KIF3BO15066 747 aa16.18■□□□□ 0.18
TPM1-225ENST00000560679 ANKLE2Q86XL3 938 aa16.18■□□□□ 0.18
TPM1-225ENST00000560679 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
TPM1-225ENST00000560679 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
TPM1-225ENST00000560679 ABCC3O15438 1527 aa16.15■□□□□ 0.18
TPM1-225ENST00000560679 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
TPM1-225ENST00000560679 WASHC2CQ9Y4E1 1318 aa16.15■□□□□ 0.18
TPM1-225ENST00000560679 ARHGEF5Q12774 1597 aa16.14■□□□□ 0.17
TPM1-225ENST00000560679 MROH1Q8NDA8 1641 aa16.13■□□□□ 0.17
TPM1-225ENST00000560679 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
TPM1-225ENST00000560679 NCOA2Q15596 1464 aa16.12■□□□□ 0.17
TPM1-225ENST00000560679 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
TPM1-225ENST00000560679 XIRP1Q702N8 1843 aaKnown RBP16.12■□□□□ 0.17
TPM1-225ENST00000560679 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
TPM1-225ENST00000560679 RGS17Q9UGC6 210 aaPredicted RBP16.1■□□□□ 0.17
TPM1-225ENST00000560679 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.17
TPM1-225ENST00000560679 CEP152O94986 1710 aa16.08■□□□□ 0.17
TPM1-225ENST00000560679 MAST1Q9Y2H9 1570 aa16.08■□□□□ 0.16
TPM1-225ENST00000560679 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
TPM1-225ENST00000560679 ARHGAP23Q9P227 1491 aa16.06■□□□□ 0.16
TPM1-225ENST00000560679 SLIT1O75093 1534 aa16.05■□□□□ 0.16
TPM1-225ENST00000560679 RSPH4AQ5TD94 716 aa16.04■□□□□ 0.16
TPM1-225ENST00000560679 LTKP29376 864 aa16.01■□□□□ 0.15
TPM1-225ENST00000560679 PRDM15P57071 1507 aaPredicted RBP16■□□□□ 0.15
TPM1-225ENST00000560679 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
TPM1-225ENST00000560679 MAP3K1Q13233 1512 aa15.99■□□□□ 0.15
TPM1-225ENST00000560679 PIK3C2BO00750 1634 aa15.98■□□□□ 0.15
TPM1-225ENST00000560679 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
TPM1-225ENST00000560679 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
TPM1-225ENST00000560679 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
TPM1-225ENST00000560679 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
TPM1-225ENST00000560679 POTEAQ6S8J7 498 aa15.97■□□□□ 0.15
TPM1-225ENST00000560679 ROBO1Q9Y6N7 1651 aa15.97■□□□□ 0.15
TPM1-225ENST00000560679 ARHGAP31Q2M1Z3 1444 aa15.96■□□□□ 0.15
TPM1-225ENST00000560679 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
TPM1-225ENST00000560679 LRRC9Q6ZRR7 1453 aa15.95■□□□□ 0.14
TPM1-225ENST00000560679 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
TPM1-225ENST00000560679 TMEM94Q12767 1356 aa15.93■□□□□ 0.14
TPM1-225ENST00000560679 TXNDC2Q86VQ3 553 aa15.93■□□□□ 0.14
TPM1-225ENST00000560679 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
TPM1-225ENST00000560679 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
TPM1-225ENST00000560679 TMEM2Q9UHN6 1383 aa15.92■□□□□ 0.14
TPM1-225ENST00000560679 TET3O43151 1660 aa15.92■□□□□ 0.14
TPM1-225ENST00000560679 EFCAB6Q5THR3 1501 aa15.9■□□□□ 0.14
TPM1-225ENST00000560679 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.13
TPM1-225ENST00000560679 ERBINQ96RT1 1412 aa15.89■□□□□ 0.13
TPM1-225ENST00000560679 KIF15Q9NS87 1388 aa15.88■□□□□ 0.13
TPM1-225ENST00000560679 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
TPM1-225ENST00000560679 EID1Q9Y6B2 187 aa15.87■□□□□ 0.13
TPM1-225ENST00000560679 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
TPM1-225ENST00000560679 PHLPP1O60346 1717 aa15.86■□□□□ 0.13
TPM1-225ENST00000560679 ADGRB3O60242 1522 aa15.86■□□□□ 0.13
TPM1-225ENST00000560679 LMTK2Q8IWU2 1503 aa15.86■□□□□ 0.13
TPM1-225ENST00000560679 RBM33Q96EV2 1170 aaKnown RBP15.86■□□□□ 0.13
TPM1-225ENST00000560679 KCNA6P17658 529 aa15.85■□□□□ 0.13
TPM1-225ENST00000560679 COL16A1Q07092 1604 aaPredicted RBP15.84■□□□□ 0.13
TPM1-225ENST00000560679 ABCC5O15440 1437 aa15.84■□□□□ 0.13
TPM1-225ENST00000560679 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
TPM1-225ENST00000560679 SLC26A8Q96RN1 970 aa15.83■□□□□ 0.12
TPM1-225ENST00000560679 LRP6O75581 1613 aa15.82■□□□□ 0.12
TPM1-225ENST00000560679 NOS1P29475 1434 aa15.81■□□□□ 0.12
TPM1-225ENST00000560679 IDI1Q13907 227 aa15.81■□□□□ 0.12
TPM1-225ENST00000560679 PTPN23Q9H3S7 1636 aa15.81■□□□□ 0.12
TPM1-225ENST00000560679 JCADQ9P266 1359 aa15.8■□□□□ 0.12
TPM1-225ENST00000560679 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
TPM1-225ENST00000560679 MSH6P52701 1360 aa15.79■□□□□ 0.12
TPM1-225ENST00000560679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.122e-7■■■□□ 17.7
TPM1-225ENST00000560679 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
TPM1-225ENST00000560679 DAPK1P53355 1430 aa15.78■□□□□ 0.12
TPM1-225ENST00000560679 CHD2O14647 1828 aaKnown RBP15.78■□□□□ 0.12
TPM1-225ENST00000560679 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms