RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
CDK12-205ENST00000559663 PZPP20742 1482 aa13.14□□□□□ -0.31
CDK12-205ENST00000559663 CCDC141Q6ZP82 1450 aa13.13□□□□□ -0.31
CDK12-205ENST00000559663 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
CDK12-205ENST00000559663 CPS1P31327 1500 aa13.13□□□□□ -0.31
CDK12-205ENST00000559663 KDM5DQ9BY66 1539 aa13.13□□□□□ -0.31
CDK12-205ENST00000559663 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
CDK12-205ENST00000559663 KIF3BO15066 747 aa13.12□□□□□ -0.31
CDK12-205ENST00000559663 SHANK2Q9UPX8 1470 aa13.11□□□□□ -0.31
CDK12-205ENST00000559663 TOM1O60784 492 aa13.1□□□□□ -0.31
CDK12-205ENST00000559663 HSPA1LP34931 641 aa13.1□□□□□ -0.31
CDK12-205ENST00000559663 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
CDK12-205ENST00000559663 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
CDK12-205ENST00000559663 WASHC2CQ9Y4E1 1318 aa13.1□□□□□ -0.31
CDK12-205ENST00000559663 CAMSAP2Q08AD1 1489 aa13.1□□□□□ -0.31
CDK12-205ENST00000559663 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
CDK12-205ENST00000559663 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
CDK12-205ENST00000559663 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
CDK12-205ENST00000559663 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
CDK12-205ENST00000559663 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
CDK12-205ENST00000559663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
CDK12-205ENST00000559663 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
CDK12-205ENST00000559663 VWDEQ8N2E2 1590 aa13.07□□□□□ -0.32
CDK12-205ENST00000559663 MED14O60244 1454 aa13.07□□□□□ -0.32
CDK12-205ENST00000559663 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
CDK12-205ENST00000559663 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
CDK12-205ENST00000559663 POLR1AO95602 1720 aaPredicted RBP13.06□□□□□ -0.32
CDK12-205ENST00000559663 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
CDK12-205ENST00000559663 ARHGEF5Q12774 1597 aa13.04□□□□□ -0.32
CDK12-205ENST00000559663 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
CDK12-205ENST00000559663 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
CDK12-205ENST00000559663 DEPDC5O75140 1603 aa13.03□□□□□ -0.32
CDK12-205ENST00000559663 ALKQ9UM73 1620 aa13.03□□□□□ -0.32
CDK12-205ENST00000559663 ABCC3O15438 1527 aa13.02□□□□□ -0.33
CDK12-205ENST00000559663 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
CDK12-205ENST00000559663 ERVK-7P63135 1459 aa13□□□□□ -0.33
CDK12-205ENST00000559663 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
CDK12-205ENST00000559663 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
CDK12-205ENST00000559663 IQGAP1P46940 1657 aa12.98□□□□□ -0.33
CDK12-205ENST00000559663 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
CDK12-205ENST00000559663 ZC3H13Q5T200 1668 aaKnown RBP12.97□□□□□ -0.33
CDK12-205ENST00000559663 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
CDK12-205ENST00000559663 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.33
CDK12-205ENST00000559663 SYNMO15061 1565 aa12.96□□□□□ -0.33
CDK12-205ENST00000559663 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
CDK12-205ENST00000559663 SCAF11Q99590 1463 aaKnown RBP12.95□□□□□ -0.34
CDK12-205ENST00000559663 ARHGAP23Q9P227 1491 aa12.94□□□□□ -0.34
CDK12-205ENST00000559663 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
CDK12-205ENST00000559663 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
CDK12-205ENST00000559663 SLIT1O75093 1534 aa12.93□□□□□ -0.34
CDK12-205ENST00000559663 STRCP1A6NGW2 1772 aa12.92□□□□□ -0.34
CDK12-205ENST00000559663 LTKP29376 864 aa12.92□□□□□ -0.34
CDK12-205ENST00000559663 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
CDK12-205ENST00000559663 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
CDK12-205ENST00000559663 SENP3Q9H4L4 574 aaPredicted RBP12.91□□□□□ -0.34
CDK12-205ENST00000559663 PRDM15P57071 1507 aaPredicted RBP12.9□□□□□ -0.34
CDK12-205ENST00000559663 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
CDK12-205ENST00000559663 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
CDK12-205ENST00000559663 TXNDC2Q86VQ3 553 aa12.9□□□□□ -0.34
CDK12-205ENST00000559663 KIF15Q9NS87 1388 aa12.9□□□□□ -0.34
CDK12-205ENST00000559663 UBR1Q8IWV7 1749 aa12.9□□□□□ -0.34
CDK12-205ENST00000559663 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
CDK12-205ENST00000559663 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
CDK12-205ENST00000559663 TMEM2Q9UHN6 1383 aa12.88□□□□□ -0.35
CDK12-205ENST00000559663 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
CDK12-205ENST00000559663 CEP152O94986 1710 aa12.87□□□□□ -0.35
CDK12-205ENST00000559663 ABCC5O15440 1437 aa12.87□□□□□ -0.35
CDK12-205ENST00000559663 FAM135BQ49AJ0 1406 aa12.87□□□□□ -0.35
CDK12-205ENST00000559663 RRP7BPQ9NSQ0 103 aa12.85□□□□□ -0.35
CDK12-205ENST00000559663 LMTK2Q8IWU2 1503 aa12.83□□□□□ -0.35
CDK12-205ENST00000559663 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
CDK12-205ENST00000559663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.366e-8■□□□□ 9.6
CDK12-205ENST00000559663 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
CDK12-205ENST00000559663 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
CDK12-205ENST00000559663 KANK1Q14678 1352 aa12.82□□□□□ -0.36
CDK12-205ENST00000559663 DAPK1P53355 1430 aa12.82□□□□□ -0.36
CDK12-205ENST00000559663 PIK3C2BO00750 1634 aa12.82□□□□□ -0.36
CDK12-205ENST00000559663 KCNA6P17658 529 aa12.82□□□□□ -0.36
CDK12-205ENST00000559663 IDI1Q13907 227 aa12.81□□□□□ -0.36
CDK12-205ENST00000559663 LOC105371045A0A1W2PR82 267 aa12.8□□□□□ -0.36
CDK12-205ENST00000559663 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
CDK12-205ENST00000559663 TET3O43151 1660 aa12.8□□□□□ -0.36
CDK12-205ENST00000559663 NOS1P29475 1434 aa12.79□□□□□ -0.36
CDK12-205ENST00000559663 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
CDK12-205ENST00000559663 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
CDK12-205ENST00000559663 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
CDK12-205ENST00000559663 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
CDK12-205ENST00000559663 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
CDK12-205ENST00000559663 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
CDK12-205ENST00000559663 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
CDK12-205ENST00000559663 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
CDK12-205ENST00000559663 PROSER2Q86WR7 435 aaPredicted RBP12.78□□□□□ -0.36
CDK12-205ENST00000559663 ADGRB3O60242 1522 aa12.78□□□□□ -0.36
CDK12-205ENST00000559663 NWD1Q149M9 1564 aa12.77□□□□□ -0.37
CDK12-205ENST00000559663 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
CDK12-205ENST00000559663 SLC52A1Q9NWF4 448 aa12.76□□□□□ -0.37
CDK12-205ENST00000559663 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
CDK12-205ENST00000559663 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
CDK12-205ENST00000559663 CFAP65Q6ZU64 1925 aaKnown RBP12.74□□□□□ -0.37
CDK12-205ENST00000559663 MSH6P52701 1360 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms