RNA–Protein interactions for RNA: ENST00000559586.5

RABGGTA-210, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-210ENST00000559586 MYOM3Q5VTT5 1437 aa31.3■■■□□ 2.6
RABGGTA-210ENST00000559586 KIF3BO15066 747 aa31.29■■■□□ 2.6
RABGGTA-210ENST00000559586 FAM135AQ9P2D6 1515 aa31.28■■■□□ 2.6
RABGGTA-210ENST00000559586 TSPY4P0CV99 314 aa31.27■■■□□ 2.6
RABGGTA-210ENST00000559586 TSPY10P0CW01 314 aa31.27■■■□□ 2.6
RABGGTA-210ENST00000559586 TCOF1Q13428 1488 aaKnown RBP31.26■■■□□ 2.59
RABGGTA-210ENST00000559586 A2ML1A8K2U0 1454 aa31.24■■■□□ 2.59
RABGGTA-210ENST00000559586 MIA2Q96PC5 1412 aa31.24■■■□□ 2.59
RABGGTA-210ENST00000559586 WASHC2CQ9Y4E1 1318 aa31.22■■■□□ 2.59
RABGGTA-210ENST00000559586 ARHGEF5Q12774 1597 aa31.21■■■□□ 2.59
RABGGTA-210ENST00000559586 KDM5DQ9BY66 1539 aa31.2■■■□□ 2.59
RABGGTA-210ENST00000559586 ZNF335Q9H4Z2 1342 aaPredicted RBP31.19■■■□□ 2.58
RABGGTA-210ENST00000559586 TNRQ92752 1358 aa31.18■■■□□ 2.58
RABGGTA-210ENST00000559586 PZPP20742 1482 aa31.17■■■□□ 2.58
RABGGTA-210ENST00000559586 DISP3Q9P2K9 1392 aa31.17■■■□□ 2.58
RABGGTA-210ENST00000559586 DNMT1P26358 1616 aaKnown RBP31.15■■■□□ 2.58
RABGGTA-210ENST00000559586 FBXO31Q5XUX0 539 aaPredicted RBP31.13■■■□□ 2.57
RABGGTA-210ENST00000559586 FGD6Q6ZV73 1430 aa31.13■■■□□ 2.57
RABGGTA-210ENST00000559586 PTPN23Q9H3S7 1636 aa31.11■■■□□ 2.57
RABGGTA-210ENST00000559586 THEMISQ8N1K5 641 aaPredicted RBP31.1■■■□□ 2.57
RABGGTA-210ENST00000559586 UBAP1LF5GYI3 381 aa31.09■■■□□ 2.57
RABGGTA-210ENST00000559586 NLRP1Q9C000 1473 aa31.08■■■□□ 2.57
RABGGTA-210ENST00000559586 ANKLE2Q86XL3 938 aa31.06■■■□□ 2.56
RABGGTA-210ENST00000559586 MAST1Q9Y2H9 1570 aa31.05■■■□□ 2.56
RABGGTA-210ENST00000559586 PPARGC1BQ86YN6 1023 aaKnown RBP31■■■□□ 2.55
RABGGTA-210ENST00000559586 POLR1AO95602 1720 aaPredicted RBP31■■■□□ 2.55
RABGGTA-210ENST00000559586 RNF17Q9BXT8 1623 aaKnown RBP30.99■■■□□ 2.55
RABGGTA-210ENST00000559586 ABCC5O15440 1437 aa30.98■■■□□ 2.55
RABGGTA-210ENST00000559586 UGGT1Q9NYU2 1555 aa30.98■■■□□ 2.55
RABGGTA-210ENST00000559586 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.98■■■□□ 2.55
RABGGTA-210ENST00000559586 CPS1P31327 1500 aa30.98■■■□□ 2.55
RABGGTA-210ENST00000559586 EIF2AK4Q9P2K8 1649 aaKnown RBP30.97■■■□□ 2.55
RABGGTA-210ENST00000559586 ZC3H13Q5T200 1668 aaKnown RBP30.97■■■□□ 2.55
RABGGTA-210ENST00000559586 SPATA31D1Q6ZQQ2 1576 aa30.96■■■□□ 2.55
RABGGTA-210ENST00000559586 CROCC2H7BZ55 1655 aa30.95■■■□□ 2.55
RABGGTA-210ENST00000559586 NEURL4Q96JN8 1562 aa30.95■■■□□ 2.54
RABGGTA-210ENST00000559586 ABCC3O15438 1527 aa30.94■■■□□ 2.54
RABGGTA-210ENST00000559586 SHANK2Q9UPX8 1470 aa30.94■■■□□ 2.54
RABGGTA-210ENST00000559586 ILDR2Q71H61 639 aa30.93■■■□□ 2.54
RABGGTA-210ENST00000559586 DAPK1P53355 1430 aa30.92■■■□□ 2.54
RABGGTA-210ENST00000559586 MED14O60244 1454 aa30.91■■■□□ 2.54
RABGGTA-210ENST00000559586 TOM1O60784 492 aa30.91■■■□□ 2.54
RABGGTA-210ENST00000559586 DEPDC5O75140 1603 aa30.91■■■□□ 2.54
RABGGTA-210ENST00000559586 DUOX2Q9NRD8 1548 aa30.9■■■□□ 2.54
RABGGTA-210ENST00000559586 SOCS7O14512 581 aa30.9■■■□□ 2.54
RABGGTA-210ENST00000559586 NPHP4O75161 1426 aaPredicted RBP30.9■■■□□ 2.54
RABGGTA-210ENST00000559586 ERVK-7P63135 1459 aa30.86■■■□□ 2.53
RABGGTA-210ENST00000559586 FAM50AQ14320 339 aaKnown RBP30.83■■■□□ 2.53
RABGGTA-210ENST00000559586 KIF15Q9NS87 1388 aa30.82■■■□□ 2.52
RABGGTA-210ENST00000559586 MROH1Q8NDA8 1641 aa30.82■■■□□ 2.52
RABGGTA-210ENST00000559586 ERBINQ96RT1 1412 aa30.81■■■□□ 2.52
RABGGTA-210ENST00000559586 SCAF1Q9H7N4 1312 aaKnown RBP30.81■■■□□ 2.52
RABGGTA-210ENST00000559586 VWDEQ8N2E2 1590 aa30.81■■■□□ 2.52
RABGGTA-210ENST00000559586 ARHGAP31Q2M1Z3 1444 aa30.79■■■□□ 2.52
RABGGTA-210ENST00000559586 IQGAP1P46940 1657 aa30.78■■■□□ 2.52
RABGGTA-210ENST00000559586 PIP4K2BP78356 416 aa30.78■■■□□ 2.52
RABGGTA-210ENST00000559586 RRP7BPQ9NSQ0 103 aa30.77■■■□□ 2.52
RABGGTA-210ENST00000559586 KANK1Q14678 1352 aa30.75■■■□□ 2.51
RABGGTA-210ENST00000559586 CEP152O94986 1710 aa30.75■■■□□ 2.51
RABGGTA-210ENST00000559586 PRDM15P57071 1507 aaPredicted RBP30.74■■■□□ 2.51
RABGGTA-210ENST00000559586 CHIC2Q9UKJ5 165 aa30.74■■■□□ 2.51
RABGGTA-210ENST00000559586 ADGRL2O95490 1459 aa30.74■■■□□ 2.51
RABGGTA-210ENST00000559586 HSPA1LP34931 641 aa30.72■■■□□ 2.51
RABGGTA-210ENST00000559586 RRBP1Q9P2E9 1410 aaKnown RBP30.72■■■□□ 2.51
RABGGTA-210ENST00000559586 ANKRD30AQ9BXX3 1397 aa30.69■■■□□ 2.5
RABGGTA-210ENST00000559586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.69■■■□□ 2.54e-6■■□□□ 14.1
RABGGTA-210ENST00000559586 UBR1Q8IWV7 1749 aa30.69■■■□□ 2.5
RABGGTA-210ENST00000559586 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
RABGGTA-210ENST00000559586 CFAP65Q6ZU64 1925 aaKnown RBP30.69■■■□□ 2.5
RABGGTA-210ENST00000559586 EID1Q9Y6B2 187 aa30.68■■■□□ 2.5
RABGGTA-210ENST00000559586 TXNDC2Q86VQ3 553 aa30.67■■■□□ 2.5
RABGGTA-210ENST00000559586 ARHGAP23Q9P227 1491 aa30.65■■■□□ 2.5
RABGGTA-210ENST00000559586 SLIT1O75093 1534 aa30.65■■■□□ 2.5
RABGGTA-210ENST00000559586 LRRC7Q96NW7 1537 aa30.63■■■□□ 2.49
RABGGTA-210ENST00000559586 SYNMO15061 1565 aa30.63■■■□□ 2.49
RABGGTA-210ENST00000559586 STAG3Q9UJ98 1225 aa30.62■■■□□ 2.49
RABGGTA-210ENST00000559586 LTKP29376 864 aa30.61■■■□□ 2.49
RABGGTA-210ENST00000559586 LMTK2Q8IWU2 1503 aa30.59■■■□□ 2.49
RABGGTA-210ENST00000559586 ROCK1Q13464 1354 aa30.57■■■□□ 2.48
RABGGTA-210ENST00000559586 TMEM2Q9UHN6 1383 aa30.56■■■□□ 2.48
RABGGTA-210ENST00000559586 STRCP1A6NGW2 1772 aa30.56■■■□□ 2.48
RABGGTA-210ENST00000559586 ALKQ9UM73 1620 aa30.54■■■□□ 2.48
RABGGTA-210ENST00000559586 KDM5AP29375 1690 aaKnown RBP30.53■■■□□ 2.48
RABGGTA-210ENST00000559586 ITGAEP38570 1179 aa30.53■■■□□ 2.48
RABGGTA-210ENST00000559586 PIK3C2BO00750 1634 aa30.53■■■□□ 2.48
RABGGTA-210ENST00000559586 MED1Q15648 1581 aaPredicted RBP30.53■■■□□ 2.48
RABGGTA-210ENST00000559586 IDI1Q13907 227 aa30.52■■■□□ 2.48
RABGGTA-210ENST00000559586 ANKRD50Q9ULJ7 1429 aa30.52■■■□□ 2.48
RABGGTA-210ENST00000559586 EFCAB6Q5THR3 1501 aa30.5■■■□□ 2.47
RABGGTA-210ENST00000559586 SLC52A1Q9NWF4 448 aa30.49■■■□□ 2.47
RABGGTA-210ENST00000559586 NOS1P29475 1434 aa30.46■■■□□ 2.47
RABGGTA-210ENST00000559586 PHF23Q9BUL5 403 aaPredicted RBP30.44■■■□□ 2.46
RABGGTA-210ENST00000559586 RPRD2Q5VT52 1461 aaKnown RBP30.42■■■□□ 2.46
RABGGTA-210ENST00000559586 KCNA6P17658 529 aa30.41■■■□□ 2.46
RABGGTA-210ENST00000559586 ADGRB3O60242 1522 aa30.37■■■□□ 2.45
RABGGTA-210ENST00000559586 UNC13BO14795 1591 aa30.37■■■□□ 2.45
RABGGTA-210ENST00000559586 HDGFP51858 240 aaKnown RBP30.37■■■□□ 2.45
RABGGTA-210ENST00000559586 SLC26A8Q96RN1 970 aa30.35■■■□□ 2.45
RABGGTA-210ENST00000559586 SENP3Q9H4L4 574 aaPredicted RBP30.35■■■□□ 2.45
RABGGTA-210ENST00000559586 TET3O43151 1660 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms