RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
CDK12-204ENST00000559545 ATP10AO60312 1499 aa8.49□□□□□ -1.05
CDK12-204ENST00000559545 VASPP50552 380 aaPredicted RBP8.48□□□□□ -1.05
CDK12-204ENST00000559545 ADAMTSL3P82987 1691 aa8.48□□□□□ -1.05
CDK12-204ENST00000559545 KDM4FA0A1W2PPD8 638 aa8.47□□□□□ -1.05
CDK12-204ENST00000559545 ARHGEF40Q8TER5 1519 aa8.47□□□□□ -1.05
CDK12-204ENST00000559545 HNRNPMP52272 730 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDK12-204ENST00000559545 HECW2Q9P2P5 1572 aa8.46□□□□□ -1.06
CDK12-204ENST00000559545 INO80Q9ULG1 1556 aaPredicted RBP8.46□□□□□ -1.06
CDK12-204ENST00000559545 ZNF644Q9H582 1327 aaPredicted RBP8.46□□□□□ -1.06
CDK12-204ENST00000559545 SIGLEC1Q9BZZ2 1709 aa8.46□□□□□ -1.06
CDK12-204ENST00000559545 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
CDK12-204ENST00000559545 ZFYVE16Q7Z3T8 1539 aa8.45□□□□□ -1.06
CDK12-204ENST00000559545 DIP2CQ9Y2E4 1556 aa8.45□□□□□ -1.06
CDK12-204ENST00000559545 TRIM26Q12899 539 aaPredicted RBP8.45□□□□□ -1.06
CDK12-204ENST00000559545 ADGBQ8N7X0 1667 aa8.45□□□□□ -1.06
CDK12-204ENST00000559545 FGD6Q6ZV73 1430 aa8.45□□□□□ -1.06
CDK12-204ENST00000559545 YEATS2Q9ULM3 1422 aa8.45□□□□□ -1.06
CDK12-204ENST00000559545 SYCP2Q9BX26 1530 aa8.44□□□□□ -1.06
CDK12-204ENST00000559545 PLXNC1O60486 1568 aa8.44□□□□□ -1.06
CDK12-204ENST00000559545 PTPN23Q9H3S7 1636 aa8.44□□□□□ -1.06
CDK12-204ENST00000559545 DHX29Q7Z478 1369 aaKnown RBP8.44□□□□□ -1.06
CDK12-204ENST00000559545 C9orf84Q5VXU9 1444 aa8.44□□□□□ -1.06
CDK12-204ENST00000559545 CCDC141Q6ZP82 1450 aa8.44□□□□□ -1.06
CDK12-204ENST00000559545 SLC4A2P04920 1241 aa8.43□□□□□ -1.06
CDK12-204ENST00000559545 SPAG9O60271 1321 aaKnown RBP8.43□□□□□ -1.06
CDK12-204ENST00000559545 ABCC5O15440 1437 aa8.43□□□□□ -1.06
CDK12-204ENST00000559545 RRBP1Q9P2E9 1410 aaKnown RBP8.43□□□□□ -1.06
CDK12-204ENST00000559545 SHANK2Q9UPX8 1470 aa8.43□□□□□ -1.06
CDK12-204ENST00000559545 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
CDK12-204ENST00000559545 DNMT1P26358 1616 aaKnown RBP8.43□□□□□ -1.06
CDK12-204ENST00000559545 ABCA6Q8N139 1617 aa8.43□□□□□ -1.06
CDK12-204ENST00000559545 ADGRL2O95490 1459 aa8.42□□□□□ -1.06
CDK12-204ENST00000559545 CROCC2H7BZ55 1655 aa8.41□□□□□ -1.06
CDK12-204ENST00000559545 FAM135AQ9P2D6 1515 aa8.41□□□□□ -1.06
CDK12-204ENST00000559545 TSPY4P0CV99 314 aa8.41□□□□□ -1.06
CDK12-204ENST00000559545 TSPY10P0CW01 314 aa8.41□□□□□ -1.06
CDK12-204ENST00000559545 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
CDK12-204ENST00000559545 NCOA1Q15788 1441 aa8.4□□□□□ -1.06
CDK12-204ENST00000559545 A2MP01023 1474 aa8.39□□□□□ -1.07
CDK12-204ENST00000559545 ROCK1Q13464 1354 aa8.39□□□□□ -1.07
CDK12-204ENST00000559545 ZNF777Q9ULD5 760 aaPredicted RBP8.39□□□□□ -1.07
CDK12-204ENST00000559545 EIF2AK4Q9P2K8 1649 aaKnown RBP8.39□□□□□ -1.07
CDK12-204ENST00000559545 DAPK1P53355 1430 aa8.38□□□□□ -1.07
CDK12-204ENST00000559545 MROH2AA6NES4 1674 aa8.38□□□□□ -1.07
CDK12-204ENST00000559545 KDM5DQ9BY66 1539 aa8.38□□□□□ -1.07
CDK12-204ENST00000559545 ECM2O94769 699 aaPredicted RBP8.37□□□□□ -1.07
CDK12-204ENST00000559545 PTPRKQ15262 1439 aa8.37□□□□□ -1.07
CDK12-204ENST00000559545 RNF17Q9BXT8 1623 aaKnown RBP8.36□□□□□ -1.07
CDK12-204ENST00000559545 DUOX2Q9NRD8 1548 aa8.36□□□□□ -1.07
CDK12-204ENST00000559545 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
CDK12-204ENST00000559545 DEPDC5O75140 1603 aa8.35□□□□□ -1.07
CDK12-204ENST00000559545 ERBINQ96RT1 1412 aa8.35□□□□□ -1.07
CDK12-204ENST00000559545 VWDEQ8N2E2 1590 aa8.35□□□□□ -1.07
CDK12-204ENST00000559545 PTPRMP28827 1452 aa8.34□□□□□ -1.07
CDK12-204ENST00000559545 FER1L4A9Z1Z3 1794 aa8.34□□□□□ -1.07
CDK12-204ENST00000559545 ANKRD30AQ9BXX3 1397 aa8.34□□□□□ -1.07
CDK12-204ENST00000559545 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
CDK12-204ENST00000559545 MROH1Q8NDA8 1641 aa8.33□□□□□ -1.08
CDK12-204ENST00000559545 HRCP23327 699 aa8.33□□□□□ -1.08
CDK12-204ENST00000559545 ARHGAP31Q2M1Z3 1444 aa8.33□□□□□ -1.08
CDK12-204ENST00000559545 LMTK2Q8IWU2 1503 aa8.33□□□□□ -1.08
CDK12-204ENST00000559545 MADDQ8WXG6 1647 aa8.32□□□□□ -1.08
CDK12-204ENST00000559545 C3P01024 1663 aa8.31□□□□□ -1.08
CDK12-204ENST00000559545 ZC3H13Q5T200 1668 aaKnown RBP8.31□□□□□ -1.08
CDK12-204ENST00000559545 NPATQ14207 1427 aa8.31□□□□□ -1.08
CDK12-204ENST00000559545 ZMYM3Q14202 1370 aa8.31□□□□□ -1.08
CDK12-204ENST00000559545 KIF15Q9NS87 1388 aa8.3□□□□□ -1.08
CDK12-204ENST00000559545 RIMS1Q86UR5 1692 aaKnown RBP8.3□□□□□ -1.08
CDK12-204ENST00000559545 PRDM15P57071 1507 aaPredicted RBP8.29□□□□□ -1.08
CDK12-204ENST00000559545 KIF3BO15066 747 aa8.29□□□□□ -1.08
CDK12-204ENST00000559545 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
CDK12-204ENST00000559545 ANKRD50Q9ULJ7 1429 aa8.29□□□□□ -1.08
CDK12-204ENST00000559545 ARID4BQ4LE39 1312 aaPredicted RBP8.28□□□□□ -1.08
CDK12-204ENST00000559545 CLTCQ00610 1675 aaKnown RBP8.27□□□□□ -1.08
CDK12-204ENST00000559545 SPDYE4A6NLX3 237 aa8.27□□□□□ -1.09
CDK12-204ENST00000559545 RRP7BPQ9NSQ0 103 aa8.27□□□□□ -1.09
CDK12-204ENST00000559545 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
CDK12-204ENST00000559545 HFM1A2PYH4 1435 aa8.27□□□□□ -1.09
CDK12-204ENST00000559545 NAIPQ13075 1403 aa8.27□□□□□ -1.09
CDK12-204ENST00000559545 KDM5AP29375 1690 aaKnown RBP8.27□□□□□ -1.09
CDK12-204ENST00000559545 UNC13BO14795 1591 aa8.27□□□□□ -1.09
CDK12-204ENST00000559545 PZPP20742 1482 aa8.26□□□□□ -1.09
CDK12-204ENST00000559545 ABCC3O15438 1527 aa8.26□□□□□ -1.09
CDK12-204ENST00000559545 GCC2Q8IWJ2 1684 aa8.26□□□□□ -1.09
CDK12-204ENST00000559545 PREX1Q8TCU6 1659 aa8.26□□□□□ -1.09
CDK12-204ENST00000559545 SPATA31D1Q6ZQQ2 1576 aa8.26□□□□□ -1.09
CDK12-204ENST00000559545 RPRD2Q5VT52 1461 aaKnown RBP8.26□□□□□ -1.09
CDK12-204ENST00000559545 FAM50AQ14320 339 aaKnown RBP8.25□□□□□ -1.09
CDK12-204ENST00000559545 GGT6Q6P531 493 aa8.25□□□□□ -1.09
CDK12-204ENST00000559545 MYT1LQ9UL68 1186 aa8.25□□□□□ -1.09
CDK12-204ENST00000559545 IQGAP3Q86VI3 1631 aa8.25□□□□□ -1.09
CDK12-204ENST00000559545 NOS1P29475 1434 aa8.24□□□□□ -1.09
CDK12-204ENST00000559545 CHIC2Q9UKJ5 165 aa8.24□□□□□ -1.09
CDK12-204ENST00000559545 LMTK3Q96Q04 1460 aa8.24□□□□□ -1.09
CDK12-204ENST00000559545 WASHC2CQ9Y4E1 1318 aa8.24□□□□□ -1.09
CDK12-204ENST00000559545 TET3O43151 1660 aa8.24□□□□□ -1.09
CDK12-204ENST00000559545 ZNF142P52746 1687 aaPredicted RBP8.24□□□□□ -1.09
CDK12-204ENST00000559545 CAMSAP1Q5T5Y3 1602 aa8.23□□□□□ -1.09
CDK12-204ENST00000559545 CEP152O94986 1710 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms