RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 RNF17Q9BXT8 1623 aaKnown RBP19.54■□□□□ 0.72
LRRC28-214ENST00000559433 NPATQ14207 1427 aa19.53■□□□□ 0.72
LRRC28-214ENST00000559433 KDM5DQ9BY66 1539 aa19.53■□□□□ 0.72
LRRC28-214ENST00000559433 FAM135AQ9P2D6 1515 aa19.53■□□□□ 0.72
LRRC28-214ENST00000559433 DUOX2Q9NRD8 1548 aa19.51■□□□□ 0.71
LRRC28-214ENST00000559433 MYO3AQ8NEV4 1616 aa19.5■□□□□ 0.71
LRRC28-214ENST00000559433 KIF15Q9NS87 1388 aa19.48■□□□□ 0.71
LRRC28-214ENST00000559433 ZC3H13Q5T200 1668 aaKnown RBP19.48■□□□□ 0.71
LRRC28-214ENST00000559433 PTPRKQ15262 1439 aa19.48■□□□□ 0.71
LRRC28-214ENST00000559433 ZNF142P52746 1687 aaPredicted RBP19.47■□□□□ 0.71
LRRC28-214ENST00000559433 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
LRRC28-214ENST00000559433 STRCQ7RTU9 1775 aa19.47■□□□□ 0.71
LRRC28-214ENST00000559433 MROH1Q8NDA8 1641 aa19.46■□□□□ 0.71
LRRC28-214ENST00000559433 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
LRRC28-214ENST00000559433 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
LRRC28-214ENST00000559433 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
LRRC28-214ENST00000559433 CEP152O94986 1710 aa19.45■□□□□ 0.7
LRRC28-214ENST00000559433 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
LRRC28-214ENST00000559433 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
LRRC28-214ENST00000559433 PZPP20742 1482 aa19.43■□□□□ 0.7
LRRC28-214ENST00000559433 ABCC3O15438 1527 aa19.43■□□□□ 0.7
LRRC28-214ENST00000559433 CHIC2Q9UKJ5 165 aa19.43■□□□□ 0.7
LRRC28-214ENST00000559433 CEP170BQ9Y4F5 1589 aaPredicted RBP19.43■□□□□ 0.7
LRRC28-214ENST00000559433 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
LRRC28-214ENST00000559433 PPARGC1BQ86YN6 1023 aaKnown RBP19.42■□□□□ 0.7
LRRC28-214ENST00000559433 PRDM15P57071 1507 aaPredicted RBP19.41■□□□□ 0.7
LRRC28-214ENST00000559433 DEPDC5O75140 1603 aa19.4■□□□□ 0.7
LRRC28-214ENST00000559433 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
LRRC28-214ENST00000559433 ADGRL2O95490 1459 aa19.4■□□□□ 0.7
LRRC28-214ENST00000559433 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
LRRC28-214ENST00000559433 TNRQ92752 1358 aa19.37■□□□□ 0.69
LRRC28-214ENST00000559433 FBXO31Q5XUX0 539 aaPredicted RBP19.37■□□□□ 0.69
LRRC28-214ENST00000559433 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
LRRC28-214ENST00000559433 CFAP65Q6ZU64 1925 aaKnown RBP19.35■□□□□ 0.69
LRRC28-214ENST00000559433 SPATA31D1Q6ZQQ2 1576 aa19.33■□□□□ 0.69
LRRC28-214ENST00000559433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.68
LRRC28-214ENST00000559433 KANK1Q14678 1352 aa19.32■□□□□ 0.68
LRRC28-214ENST00000559433 ERVK-7P63135 1459 aa19.31■□□□□ 0.68
LRRC28-214ENST00000559433 PLA2R1Q13018 1463 aa19.31■□□□□ 0.68
LRRC28-214ENST00000559433 PTPRTO14522 1441 aa19.31■□□□□ 0.68
LRRC28-214ENST00000559433 NLRP1Q9C000 1473 aa19.3■□□□□ 0.68
LRRC28-214ENST00000559433 FBXO41Q8TF61 875 aa19.3■□□□□ 0.68
LRRC28-214ENST00000559433 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
LRRC28-214ENST00000559433 VWDEQ8N2E2 1590 aa19.29■□□□□ 0.68
LRRC28-214ENST00000559433 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
LRRC28-214ENST00000559433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.28■□□□□ 0.68
LRRC28-214ENST00000559433 ITGAEP38570 1179 aa19.27■□□□□ 0.68
LRRC28-214ENST00000559433 ROCK1Q13464 1354 aa19.27■□□□□ 0.68
LRRC28-214ENST00000559433 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.67
LRRC28-214ENST00000559433 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
LRRC28-214ENST00000559433 ARHGAP31Q2M1Z3 1444 aa19.26■□□□□ 0.67
LRRC28-214ENST00000559433 LMTK2Q8IWU2 1503 aa19.26■□□□□ 0.67
LRRC28-214ENST00000559433 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
LRRC28-214ENST00000559433 PKD2Q13563 968 aa19.24■□□□□ 0.67
LRRC28-214ENST00000559433 EFCAB6Q5THR3 1501 aa19.24■□□□□ 0.67
LRRC28-214ENST00000559433 RRBP1Q9P2E9 1410 aaKnown RBP19.24■□□□□ 0.67
LRRC28-214ENST00000559433 UNC13BO14795 1591 aa19.23■□□□□ 0.67
LRRC28-214ENST00000559433 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
LRRC28-214ENST00000559433 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
LRRC28-214ENST00000559433 TET3O43151 1660 aa19.2■□□□□ 0.66
LRRC28-214ENST00000559433 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
LRRC28-214ENST00000559433 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
LRRC28-214ENST00000559433 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
LRRC28-214ENST00000559433 SYNMO15061 1565 aa19.17■□□□□ 0.66
LRRC28-214ENST00000559433 LTBP4Q8N2S1 1624 aa19.16■□□□□ 0.66
LRRC28-214ENST00000559433 ANKLE2Q86XL3 938 aa19.16■□□□□ 0.66
LRRC28-214ENST00000559433 IQGAP3Q86VI3 1631 aa19.15■□□□□ 0.66
LRRC28-214ENST00000559433 RPRD2Q5VT52 1461 aaKnown RBP19.15■□□□□ 0.66
LRRC28-214ENST00000559433 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
LRRC28-214ENST00000559433 KDM5AP29375 1690 aaKnown RBP19.13■□□□□ 0.65
LRRC28-214ENST00000559433 E9PCH4 1651 aa19.12■□□□□ 0.65
LRRC28-214ENST00000559433 NOS1P29475 1434 aa19.12■□□□□ 0.65
LRRC28-214ENST00000559433 ZNF335Q9H4Z2 1342 aaPredicted RBP19.12■□□□□ 0.65
LRRC28-214ENST00000559433 NPHP4O75161 1426 aaPredicted RBP19.11■□□□□ 0.65
LRRC28-214ENST00000559433 STAG3Q9UJ98 1225 aa19.11■□□□□ 0.65
LRRC28-214ENST00000559433 MED14O60244 1454 aa19.1■□□□□ 0.65
LRRC28-214ENST00000559433 SLIT1O75093 1534 aa19.1■□□□□ 0.65
LRRC28-214ENST00000559433 ADGRB3O60242 1522 aa19.09■□□□□ 0.65
LRRC28-214ENST00000559433 NUP155O75694 1391 aa19.08■□□□□ 0.65
LRRC28-214ENST00000559433 SCAF11Q99590 1463 aaKnown RBP19.08■□□□□ 0.64
LRRC28-214ENST00000559433 ARHGAP23Q9P227 1491 aa19.08■□□□□ 0.64
LRRC28-214ENST00000559433 MYO5BQ9ULV0 1848 aa19.07■□□□□ 0.64
LRRC28-214ENST00000559433 IQSEC2Q5JU85 1478 aa19.06■□□□□ 0.64
LRRC28-214ENST00000559433 IDI1Q13907 227 aa19.06■□□□□ 0.64
LRRC28-214ENST00000559433 NAIPQ13075 1403 aa19.05■□□□□ 0.64
LRRC28-214ENST00000559433 TMEM2Q9UHN6 1383 aa19.04■□□□□ 0.64
LRRC28-214ENST00000559433 SLC52A1Q9NWF4 448 aa19.03■□□□□ 0.64
LRRC28-214ENST00000559433 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
LRRC28-214ENST00000559433 HFM1A2PYH4 1435 aa19.02■□□□□ 0.64
LRRC28-214ENST00000559433 TXNDC2Q86VQ3 553 aa19.02■□□□□ 0.64
LRRC28-214ENST00000559433 CPS1P31327 1500 aa19.01■□□□□ 0.63
LRRC28-214ENST00000559433 SPHKAPQ2M3C7 1700 aa19.01■□□□□ 0.63
LRRC28-214ENST00000559433 LTKP29376 864 aa19.01■□□□□ 0.63
LRRC28-214ENST00000559433 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
LRRC28-214ENST00000559433 STRCP1A6NGW2 1772 aa18.99■□□□□ 0.63
LRRC28-214ENST00000559433 UBAP1LF5GYI3 381 aa18.96■□□□□ 0.63
LRRC28-214ENST00000559433 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
LRRC28-214ENST00000559433 BCANQ96GW7 911 aa18.94■□□□□ 0.62
LRRC28-214ENST00000559433 HDGFP51858 240 aaKnown RBP18.93■□□□□ 0.62
LRRC28-214ENST00000559433 ZFYVE9O95405 1425 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms