RNA–Protein interactions for RNA: ENST00000559417.1

PCSK6-208, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 5

Gene PCSK6, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-208ENST00000559417 KDM5DQ9BY66 1539 aa28.65■■■□□ 2.18
PCSK6-208ENST00000559417 CEP170BQ9Y4F5 1589 aaPredicted RBP28.65■■■□□ 2.18
PCSK6-208ENST00000559417 PTPRTO14522 1441 aa28.62■■■□□ 2.17
PCSK6-208ENST00000559417 FAM135AQ9P2D6 1515 aa28.62■■■□□ 2.17
PCSK6-208ENST00000559417 PTPN23Q9H3S7 1636 aa28.57■■■□□ 2.16
PCSK6-208ENST00000559417 CROCC2H7BZ55 1655 aa28.56■■■□□ 2.16
PCSK6-208ENST00000559417 RNF17Q9BXT8 1623 aaKnown RBP28.56■■■□□ 2.16
PCSK6-208ENST00000559417 WASHC2CQ9Y4E1 1318 aa28.56■■■□□ 2.16
PCSK6-208ENST00000559417 EIF2AK4Q9P2K8 1649 aaKnown RBP28.55■■■□□ 2.16
PCSK6-208ENST00000559417 PZPP20742 1482 aa28.55■■■□□ 2.16
PCSK6-208ENST00000559417 PLA2R1Q13018 1463 aa28.53■■■□□ 2.16
PCSK6-208ENST00000559417 A2ML1A8K2U0 1454 aa28.52■■■□□ 2.16
PCSK6-208ENST00000559417 TNRQ92752 1358 aa28.51■■■□□ 2.16
PCSK6-208ENST00000559417 ZC3H13Q5T200 1668 aaKnown RBP28.51■■■□□ 2.15
PCSK6-208ENST00000559417 NCKAP5LQ9HCH0 1330 aa28.5■■■□□ 2.15
PCSK6-208ENST00000559417 FBXO31Q5XUX0 539 aaPredicted RBP28.5■■■□□ 2.15
PCSK6-208ENST00000559417 DNMT1P26358 1616 aaKnown RBP28.5■■■□□ 2.15
PCSK6-208ENST00000559417 DUOX2Q9NRD8 1548 aa28.48■■■□□ 2.15
PCSK6-208ENST00000559417 SHANK2Q9UPX8 1470 aa28.47■■■□□ 2.15
PCSK6-208ENST00000559417 FGD6Q6ZV73 1430 aa28.47■■■□□ 2.15
PCSK6-208ENST00000559417 ABCC3O15438 1527 aa28.46■■■□□ 2.15
PCSK6-208ENST00000559417 CEP152O94986 1710 aa28.46■■■□□ 2.15
PCSK6-208ENST00000559417 TCOF1Q13428 1488 aaKnown RBP28.46■■■□□ 2.15
PCSK6-208ENST00000559417 LTBP4Q8N2S1 1624 aa28.45■■■□□ 2.14
PCSK6-208ENST00000559417 ABCC5O15440 1437 aa28.44■■■□□ 2.14
PCSK6-208ENST00000559417 MROH1Q8NDA8 1641 aa28.44■■■□□ 2.14
PCSK6-208ENST00000559417 PKD2Q13563 968 aa28.44■■■□□ 2.14
PCSK6-208ENST00000559417 KIF15Q9NS87 1388 aa28.43■■■□□ 2.14
PCSK6-208ENST00000559417 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
PCSK6-208ENST00000559417 DAPK1P53355 1430 aa28.43■■■□□ 2.14
PCSK6-208ENST00000559417 NLRP1Q9C000 1473 aa28.38■■■□□ 2.13
PCSK6-208ENST00000559417 ERBINQ96RT1 1412 aa28.37■■■□□ 2.13
PCSK6-208ENST00000559417 RRP7BPQ9NSQ0 103 aa28.37■■■□□ 2.13
PCSK6-208ENST00000559417 ZNF335Q9H4Z2 1342 aaPredicted RBP28.36■■■□□ 2.13
PCSK6-208ENST00000559417 UGGT1Q9NYU2 1555 aa28.36■■■□□ 2.13
PCSK6-208ENST00000559417 CFAP65Q6ZU64 1925 aaKnown RBP28.35■■■□□ 2.13
PCSK6-208ENST00000559417 PRDM15P57071 1507 aaPredicted RBP28.35■■■□□ 2.13
PCSK6-208ENST00000559417 SPATA31D1Q6ZQQ2 1576 aa28.35■■■□□ 2.13
PCSK6-208ENST00000559417 ERVK-7P63135 1459 aa28.34■■■□□ 2.13
PCSK6-208ENST00000559417 NEURL4Q96JN8 1562 aa28.33■■■□□ 2.12
PCSK6-208ENST00000559417 IQSEC2Q5JU85 1478 aa28.32■■■□□ 2.12
PCSK6-208ENST00000559417 CHIC2Q9UKJ5 165 aa28.31■■■□□ 2.12
PCSK6-208ENST00000559417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.31■■■□□ 2.12
PCSK6-208ENST00000559417 DEPDC5O75140 1603 aa28.3■■■□□ 2.12
PCSK6-208ENST00000559417 ANKRD30AQ9BXX3 1397 aa28.29■■■□□ 2.12
PCSK6-208ENST00000559417 FAM50AQ14320 339 aaKnown RBP28.27■■■□□ 2.12
PCSK6-208ENST00000559417 THEMISQ8N1K5 641 aaPredicted RBP28.27■■■□□ 2.12
PCSK6-208ENST00000559417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.27■■■□□ 2.127e-8■□□□□ 10.3
PCSK6-208ENST00000559417 ANKLE2Q86XL3 938 aa28.24■■■□□ 2.11
PCSK6-208ENST00000559417 KANK1Q14678 1352 aa28.24■■■□□ 2.11
PCSK6-208ENST00000559417 UBR1Q8IWV7 1749 aa28.21■■■□□ 2.11
PCSK6-208ENST00000559417 ADGRL2O95490 1459 aa28.2■■■□□ 2.1
PCSK6-208ENST00000559417 IQGAP1P46940 1657 aa28.19■■■□□ 2.1
PCSK6-208ENST00000559417 ARHGAP31Q2M1Z3 1444 aa28.19■■■□□ 2.1
PCSK6-208ENST00000559417 NPHP4O75161 1426 aaPredicted RBP28.18■■■□□ 2.1
PCSK6-208ENST00000559417 MED14O60244 1454 aa28.15■■■□□ 2.1
PCSK6-208ENST00000559417 CPS1P31327 1500 aa28.14■■■□□ 2.1
PCSK6-208ENST00000559417 VWDEQ8N2E2 1590 aa28.14■■■□□ 2.1
PCSK6-208ENST00000559417 LMTK2Q8IWU2 1503 aa28.13■■■□□ 2.09
PCSK6-208ENST00000559417 PIK3C2BO00750 1634 aa28.12■■■□□ 2.09
PCSK6-208ENST00000559417 UBAP1LF5GYI3 381 aa28.12■■■□□ 2.09
PCSK6-208ENST00000559417 EFCAB6Q5THR3 1501 aa28.1■■■□□ 2.09
PCSK6-208ENST00000559417 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
PCSK6-208ENST00000559417 SCAF11Q99590 1463 aaKnown RBP28.08■■■□□ 2.09
PCSK6-208ENST00000559417 SYNMO15061 1565 aa28.04■■■□□ 2.08
PCSK6-208ENST00000559417 SLIT1O75093 1534 aa28.04■■■□□ 2.08
PCSK6-208ENST00000559417 STAG3Q9UJ98 1225 aa28.04■■■□□ 2.08
PCSK6-208ENST00000559417 ARHGAP23Q9P227 1491 aa28.03■■■□□ 2.08
PCSK6-208ENST00000559417 PPARGC1BQ86YN6 1023 aaKnown RBP28.02■■■□□ 2.08
PCSK6-208ENST00000559417 STRCP1A6NGW2 1772 aa28.01■■■□□ 2.08
PCSK6-208ENST00000559417 KDM5AP29375 1690 aaKnown RBP28■■■□□ 2.07
PCSK6-208ENST00000559417 TET3O43151 1660 aa28■■■□□ 2.07
PCSK6-208ENST00000559417 SCAF1Q9H7N4 1312 aaKnown RBP27.99■■■□□ 2.07
PCSK6-208ENST00000559417 TXNDC2Q86VQ3 553 aa27.99■■■□□ 2.07
PCSK6-208ENST00000559417 UNC13BO14795 1591 aa27.99■■■□□ 2.07
PCSK6-208ENST00000559417 EID1Q9Y6B2 187 aa27.98■■■□□ 2.07
PCSK6-208ENST00000559417 DISP3Q9P2K9 1392 aa27.98■■■□□ 2.07
PCSK6-208ENST00000559417 LTKP29376 864 aa27.97■■■□□ 2.07
PCSK6-208ENST00000559417 NOS1P29475 1434 aa27.97■■■□□ 2.07
PCSK6-208ENST00000559417 GCC2Q8IWJ2 1684 aa27.97■■■□□ 2.07
PCSK6-208ENST00000559417 ITGAEP38570 1179 aa27.96■■■□□ 2.07
PCSK6-208ENST00000559417 ADGRB3O60242 1522 aa27.96■■■□□ 2.07
PCSK6-208ENST00000559417 TMEM2Q9UHN6 1383 aa27.95■■■□□ 2.06
PCSK6-208ENST00000559417 RPRD2Q5VT52 1461 aaKnown RBP27.95■■■□□ 2.06
PCSK6-208ENST00000559417 PIP4K2BP78356 416 aa27.94■■■□□ 2.06
PCSK6-208ENST00000559417 IDI1Q13907 227 aa27.94■■■□□ 2.06
PCSK6-208ENST00000559417 ROCK1Q13464 1354 aa27.94■■■□□ 2.06
PCSK6-208ENST00000559417 TOM1O60784 492 aa27.92■■■□□ 2.06
PCSK6-208ENST00000559417 LRRC7Q96NW7 1537 aa27.91■■■□□ 2.06
PCSK6-208ENST00000559417 MYO5BQ9ULV0 1848 aa27.88■■■□□ 2.05
PCSK6-208ENST00000559417 IQGAP3Q86VI3 1631 aa27.88■■■□□ 2.05
PCSK6-208ENST00000559417 E9PCH4 1651 aa27.87■■■□□ 2.05
PCSK6-208ENST00000559417 SLC52A1Q9NWF4 448 aa27.86■■■□□ 2.05
PCSK6-208ENST00000559417 ALKQ9UM73 1620 aa27.83■■■□□ 2.05
PCSK6-208ENST00000559417 HSPA1LP34931 641 aa27.8■■■□□ 2.04
PCSK6-208ENST00000559417 XIRP1Q702N8 1843 aaKnown RBP27.8■■■□□ 2.04
PCSK6-208ENST00000559417 TMEM131LA2VDJ0 1609 aa27.78■■■□□ 2.04
PCSK6-208ENST00000559417 NUP155O75694 1391 aa27.78■■■□□ 2.04
PCSK6-208ENST00000559417 BCANQ96GW7 911 aa27.77■■■□□ 2.04
PCSK6-208ENST00000559417 SLC26A8Q96RN1 970 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms