RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 POLR1AO95602 1720 aaPredicted RBP26.48■■□□□ 1.83
PSEN1-224ENST00000559361 FBXO31Q5XUX0 539 aaPredicted RBP26.47■■□□□ 1.83
PSEN1-224ENST00000559361 CPS1P31327 1500 aa26.47■■□□□ 1.83
PSEN1-224ENST00000559361 TNRQ92752 1358 aa26.46■■□□□ 1.83
PSEN1-224ENST00000559361 FAM135AQ9P2D6 1515 aa26.45■■□□□ 1.83
PSEN1-224ENST00000559361 PZPP20742 1482 aa26.45■■□□□ 1.82
PSEN1-224ENST00000559361 SHANK2Q9UPX8 1470 aa26.45■■□□□ 1.82
PSEN1-224ENST00000559361 HSPA1LP34931 641 aa26.45■■□□□ 1.82
PSEN1-224ENST00000559361 VPS8Q8N3P4 1428 aa26.43■■□□□ 1.82
PSEN1-224ENST00000559361 TOM1O60784 492 aa26.43■■□□□ 1.82
PSEN1-224ENST00000559361 EHBP1L1Q8N3D4 1523 aa26.43■■□□□ 1.82
PSEN1-224ENST00000559361 KIF3BO15066 747 aa26.42■■□□□ 1.82
PSEN1-224ENST00000559361 KDM5DQ9BY66 1539 aa26.41■■□□□ 1.82
PSEN1-224ENST00000559361 MED1Q15648 1581 aaPredicted RBP26.39■■□□□ 1.82
PSEN1-224ENST00000559361 PIP4K2BP78356 416 aa26.39■■□□□ 1.82
PSEN1-224ENST00000559361 ANKLE2Q86XL3 938 aa26.39■■□□□ 1.82
PSEN1-224ENST00000559361 VWDEQ8N2E2 1590 aa26.38■■□□□ 1.81
PSEN1-224ENST00000559361 RSPH4AQ5TD94 716 aa26.38■■□□□ 1.81
PSEN1-224ENST00000559361 MIA2Q96PC5 1412 aa26.38■■□□□ 1.81
PSEN1-224ENST00000559361 MED14O60244 1454 aa26.37■■□□□ 1.81
PSEN1-224ENST00000559361 CCDC141Q6ZP82 1450 aa26.37■■□□□ 1.81
PSEN1-224ENST00000559361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.37■■□□□ 1.81
PSEN1-224ENST00000559361 THEMISQ8N1K5 641 aaPredicted RBP26.37■■□□□ 1.81
PSEN1-224ENST00000559361 SCAF1Q9H7N4 1312 aaKnown RBP26.36■■□□□ 1.81
PSEN1-224ENST00000559361 WASHC2CQ9Y4E1 1318 aa26.36■■□□□ 1.81
PSEN1-224ENST00000559361 NLRP1Q9C000 1473 aa26.36■■□□□ 1.81
PSEN1-224ENST00000559361 DEPDC5O75140 1603 aa26.35■■□□□ 1.81
PSEN1-224ENST00000559361 ALKQ9UM73 1620 aa26.35■■□□□ 1.81
PSEN1-224ENST00000559361 CAMSAP2Q08AD1 1489 aa26.32■■□□□ 1.8
PSEN1-224ENST00000559361 UGGT1Q9NYU2 1555 aa26.32■■□□□ 1.8
PSEN1-224ENST00000559361 NPHP4O75161 1426 aaPredicted RBP26.31■■□□□ 1.8
PSEN1-224ENST00000559361 NCOA2Q15596 1464 aa26.29■■□□□ 1.8
PSEN1-224ENST00000559361 ARHGEF5Q12774 1597 aa26.27■■□□□ 1.8
PSEN1-224ENST00000559361 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
PSEN1-224ENST00000559361 STRCP1A6NGW2 1772 aa26.24■■□□□ 1.79
PSEN1-224ENST00000559361 RNF17Q9BXT8 1623 aaKnown RBP26.22■■□□□ 1.79
PSEN1-224ENST00000559361 TSPY4P0CV99 314 aa26.22■■□□□ 1.79
PSEN1-224ENST00000559361 TSPY10P0CW01 314 aa26.22■■□□□ 1.79
PSEN1-224ENST00000559361 LRRC7Q96NW7 1537 aa26.21■■□□□ 1.79
PSEN1-224ENST00000559361 ABCC3O15438 1527 aa26.19■■□□□ 1.78
PSEN1-224ENST00000559361 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
PSEN1-224ENST00000559361 ZC3H13Q5T200 1668 aaKnown RBP26.18■■□□□ 1.78
PSEN1-224ENST00000559361 APLP2Q06481 763 aa26.16■■□□□ 1.78
PSEN1-224ENST00000559361 ERVK-7P63135 1459 aa26.16■■□□□ 1.78
PSEN1-224ENST00000559361 MAST1Q9Y2H9 1570 aa26.16■■□□□ 1.78
PSEN1-224ENST00000559361 SYNMO15061 1565 aa26.15■■□□□ 1.78
PSEN1-224ENST00000559361 PHF23Q9BUL5 403 aaPredicted RBP26.14■■□□□ 1.78
PSEN1-224ENST00000559361 CFAP65Q6ZU64 1925 aaKnown RBP26.14■■□□□ 1.77
PSEN1-224ENST00000559361 EIF2AK4Q9P2K8 1649 aaKnown RBP26.13■■□□□ 1.77
PSEN1-224ENST00000559361 MROH1Q8NDA8 1641 aa26.12■■□□□ 1.77
PSEN1-224ENST00000559361 UBR1Q8IWV7 1749 aa26.11■■□□□ 1.77
PSEN1-224ENST00000559361 ARHGAP23Q9P227 1491 aa26.07■■□□□ 1.76
PSEN1-224ENST00000559361 SCAF11Q99590 1463 aaKnown RBP26.06■■□□□ 1.76
PSEN1-224ENST00000559361 LTKP29376 864 aa26.06■■□□□ 1.76
PSEN1-224ENST00000559361 CEP152O94986 1710 aa26.05■■□□□ 1.76
PSEN1-224ENST00000559361 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
PSEN1-224ENST00000559361 SLIT1O75093 1534 aa26.05■■□□□ 1.76
PSEN1-224ENST00000559361 XIRP1Q702N8 1843 aaKnown RBP26.04■■□□□ 1.76
PSEN1-224ENST00000559361 RGS17Q9UGC6 210 aaPredicted RBP26.03■■□□□ 1.76
PSEN1-224ENST00000559361 ARHGAP31Q2M1Z3 1444 aa26.02■■□□□ 1.76
PSEN1-224ENST00000559361 DUOX2Q9NRD8 1548 aa26■■□□□ 1.75
PSEN1-224ENST00000559361 TXNDC2Q86VQ3 553 aa26■■□□□ 1.75
PSEN1-224ENST00000559361 SENP3Q9H4L4 574 aaPredicted RBP26■■□□□ 1.75
PSEN1-224ENST00000559361 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
PSEN1-224ENST00000559361 PRDM15P57071 1507 aaPredicted RBP25.95■■□□□ 1.74
PSEN1-224ENST00000559361 KANK4Q5T7N3 995 aaPredicted RBP25.95■■□□□ 1.74
PSEN1-224ENST00000559361 FAM135BQ49AJ0 1406 aa25.95■■□□□ 1.74
PSEN1-224ENST00000559361 EID1Q9Y6B2 187 aa25.93■■□□□ 1.74
PSEN1-224ENST00000559361 TMEM2Q9UHN6 1383 aa25.91■■□□□ 1.74
PSEN1-224ENST00000559361 PIK3C2BO00750 1634 aa25.9■■□□□ 1.74
PSEN1-224ENST00000559361 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
PSEN1-224ENST00000559361 ERBINQ96RT1 1412 aa25.89■■□□□ 1.74
PSEN1-224ENST00000559361 KDM5AP29375 1690 aaKnown RBP25.87■■□□□ 1.73
PSEN1-224ENST00000559361 ABCC5O15440 1437 aa25.86■■□□□ 1.73
PSEN1-224ENST00000559361 TMEM94Q12767 1356 aa25.85■■□□□ 1.73
PSEN1-224ENST00000559361 KCNA6P17658 529 aa25.85■■□□□ 1.73
PSEN1-224ENST00000559361 TET3O43151 1660 aa25.84■■□□□ 1.73
PSEN1-224ENST00000559361 RRP7BPQ9NSQ0 103 aa25.84■■□□□ 1.73
PSEN1-224ENST00000559361 CROCC2H7BZ55 1655 aa25.83■■□□□ 1.73
PSEN1-224ENST00000559361 IDI1Q13907 227 aa25.83■■□□□ 1.73
PSEN1-224ENST00000559361 POTEAQ6S8J7 498 aa25.82■■□□□ 1.72
PSEN1-224ENST00000559361 EFCAB6Q5THR3 1501 aa25.82■■□□□ 1.72
PSEN1-224ENST00000559361 LMTK2Q8IWU2 1503 aa25.81■■□□□ 1.72
PSEN1-224ENST00000559361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.8■■□□□ 1.722e-7■□□□□ 10.6
PSEN1-224ENST00000559361 STAG3Q9UJ98 1225 aa25.79■■□□□ 1.72
PSEN1-224ENST00000559361 ROBO1Q9Y6N7 1651 aa25.79■■□□□ 1.72
PSEN1-224ENST00000559361 KANK1Q14678 1352 aa25.78■■□□□ 1.72
PSEN1-224ENST00000559361 PROSER2Q86WR7 435 aaPredicted RBP25.76■■□□□ 1.71
PSEN1-224ENST00000559361 SLC26A8Q96RN1 970 aa25.76■■□□□ 1.71
PSEN1-224ENST00000559361 NOS1P29475 1434 aa25.76■■□□□ 1.71
PSEN1-224ENST00000559361 PTPN23Q9H3S7 1636 aa25.76■■□□□ 1.71
PSEN1-224ENST00000559361 DAPK1P53355 1430 aa25.75■■□□□ 1.71
PSEN1-224ENST00000559361 NWD1Q149M9 1564 aa25.74■■□□□ 1.71
PSEN1-224ENST00000559361 NKTRP30414 1462 aaKnown RBP25.73■■□□□ 1.71
PSEN1-224ENST00000559361 RBM33Q96EV2 1170 aaKnown RBP25.72■■□□□ 1.71
PSEN1-224ENST00000559361 ADGRB3O60242 1522 aa25.69■■□□□ 1.7
PSEN1-224ENST00000559361 SLC52A1Q9NWF4 448 aa25.69■■□□□ 1.7
PSEN1-224ENST00000559361 ANKRD30AQ9BXX3 1397 aa25.68■■□□□ 1.7
PSEN1-224ENST00000559361 SLAIN2Q9P270 581 aa25.67■■□□□ 1.7
PSEN1-224ENST00000559361 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms