RNA–Protein interactions for RNA: ENST00000559253.1

IPO4-208, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 579 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-208ENST00000559253 KDM5DQ9BY66 1539 aa25.25■■□□□ 1.63
IPO4-208ENST00000559253 RNF17Q9BXT8 1623 aaKnown RBP25.24■■□□□ 1.63
IPO4-208ENST00000559253 KIF15Q9NS87 1388 aa25.24■■□□□ 1.63
IPO4-208ENST00000559253 ERBINQ96RT1 1412 aa25.23■■□□□ 1.63
IPO4-208ENST00000559253 PTPRKQ15262 1439 aa25.22■■□□□ 1.63
IPO4-208ENST00000559253 ANKRD30AQ9BXX3 1397 aa25.21■■□□□ 1.63
IPO4-208ENST00000559253 HSPA2P54652 639 aa25.2■■□□□ 1.62
IPO4-208ENST00000559253 WASHC2CQ9Y4E1 1318 aa25.19■■□□□ 1.62
IPO4-208ENST00000559253 ADGRL2O95490 1459 aa25.19■■□□□ 1.62
IPO4-208ENST00000559253 NCOA1Q15788 1441 aa25.18■■□□□ 1.62
IPO4-208ENST00000559253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.62
IPO4-208ENST00000559253 PZPP20742 1482 aa25.17■■□□□ 1.62
IPO4-208ENST00000559253 ZC3H13Q5T200 1668 aaKnown RBP25.16■■□□□ 1.62
IPO4-208ENST00000559253 FAM50AQ14320 339 aaKnown RBP25.15■■□□□ 1.62
IPO4-208ENST00000559253 RRP7BPQ9NSQ0 103 aa25.14■■□□□ 1.62
IPO4-208ENST00000559253 ABCC3O15438 1527 aa25.12■■□□□ 1.61
IPO4-208ENST00000559253 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
IPO4-208ENST00000559253 PRDM15P57071 1507 aaPredicted RBP25.12■■□□□ 1.61
IPO4-208ENST00000559253 DMRT2Q9Y5R5 561 aa25.11■■□□□ 1.61
IPO4-208ENST00000559253 ZNF142P52746 1687 aaPredicted RBP25.09■■□□□ 1.61
IPO4-208ENST00000559253 DEPDC5O75140 1603 aa25.08■■□□□ 1.61
IPO4-208ENST00000559253 MYO3AQ8NEV4 1616 aa25.08■■□□□ 1.61
IPO4-208ENST00000559253 CHIC2Q9UKJ5 165 aa25.08■■□□□ 1.61
IPO4-208ENST00000559253 ROCK1Q13464 1354 aa25.06■■□□□ 1.6
IPO4-208ENST00000559253 TNRQ92752 1358 aa25.06■■□□□ 1.6
IPO4-208ENST00000559253 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
IPO4-208ENST00000559253 ARHGAP31Q2M1Z3 1444 aa25.05■■□□□ 1.6
IPO4-208ENST00000559253 A2ML1A8K2U0 1454 aa25.04■■□□□ 1.6
IPO4-208ENST00000559253 PLA2R1Q13018 1463 aa25.04■■□□□ 1.6
IPO4-208ENST00000559253 KANK1Q14678 1352 aa25.04■■□□□ 1.6
IPO4-208ENST00000559253 NLRP1Q9C000 1473 aa25.02■■□□□ 1.6
IPO4-208ENST00000559253 FBXO31Q5XUX0 539 aaPredicted RBP25.02■■□□□ 1.6
IPO4-208ENST00000559253 STRCQ7RTU9 1775 aa25.02■■□□□ 1.6
IPO4-208ENST00000559253 PTPRTO14522 1441 aa25.02■■□□□ 1.6
IPO4-208ENST00000559253 ANKRD50Q9ULJ7 1429 aa25.02■■□□□ 1.6
IPO4-208ENST00000559253 RRBP1Q9P2E9 1410 aaKnown RBP25.01■■□□□ 1.59
IPO4-208ENST00000559253 LMTK2Q8IWU2 1503 aa25.01■■□□□ 1.59
IPO4-208ENST00000559253 SPATA31D1Q6ZQQ2 1576 aa25.01■■□□□ 1.59
IPO4-208ENST00000559253 VWDEQ8N2E2 1590 aa25■■□□□ 1.59
IPO4-208ENST00000559253 CAMSAP1Q5T5Y3 1602 aa24.99■■□□□ 1.59
IPO4-208ENST00000559253 ERVK-7P63135 1459 aa24.97■■□□□ 1.59
IPO4-208ENST00000559253 PKD2Q13563 968 aa24.97■■□□□ 1.59
IPO4-208ENST00000559253 PPARGC1BQ86YN6 1023 aaKnown RBP24.96■■□□□ 1.59
IPO4-208ENST00000559253 CEP152O94986 1710 aa24.95■■□□□ 1.58
IPO4-208ENST00000559253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.583e-6■□□□□ 8.6
IPO4-208ENST00000559253 THEMISQ8N1K5 641 aaPredicted RBP24.91■■□□□ 1.58
IPO4-208ENST00000559253 UGGT1Q9NYU2 1555 aa24.88■■□□□ 1.57
IPO4-208ENST00000559253 EFCAB6Q5THR3 1501 aa24.87■■□□□ 1.57
IPO4-208ENST00000559253 RPRD2Q5VT52 1461 aaKnown RBP24.87■■□□□ 1.57
IPO4-208ENST00000559253 UNC13BO14795 1591 aa24.86■■□□□ 1.57
IPO4-208ENST00000559253 NCKAP5LQ9HCH0 1330 aa24.84■■□□□ 1.57
IPO4-208ENST00000559253 NOS1P29475 1434 aa24.82■■□□□ 1.56
IPO4-208ENST00000559253 ITGAEP38570 1179 aa24.82■■□□□ 1.56
IPO4-208ENST00000559253 ANKLE2Q86XL3 938 aa24.81■■□□□ 1.56
IPO4-208ENST00000559253 FBXO41Q8TF61 875 aa24.8■■□□□ 1.56
IPO4-208ENST00000559253 TET3O43151 1660 aa24.8■■□□□ 1.56
IPO4-208ENST00000559253 ILDR1Q86SU0 546 aaPredicted RBP24.79■■□□□ 1.56
IPO4-208ENST00000559253 CERKQ8TCT0 537 aa24.79■■□□□ 1.56
IPO4-208ENST00000559253 MED14O60244 1454 aa24.78■■□□□ 1.56
IPO4-208ENST00000559253 SLC52A1Q9NWF4 448 aa24.77■■□□□ 1.56
IPO4-208ENST00000559253 KDM5AP29375 1690 aaKnown RBP24.77■■□□□ 1.56
IPO4-208ENST00000559253 IQGAP3Q86VI3 1631 aa24.76■■□□□ 1.55
IPO4-208ENST00000559253 POLR1AO95602 1720 aaPredicted RBP24.76■■□□□ 1.55
IPO4-208ENST00000559253 NEURL4Q96JN8 1562 aa24.76■■□□□ 1.55
IPO4-208ENST00000559253 UBR1Q8IWV7 1749 aa24.75■■□□□ 1.55
IPO4-208ENST00000559253 SLIT1O75093 1534 aa24.74■■□□□ 1.55
IPO4-208ENST00000559253 GCC2Q8IWJ2 1684 aa24.74■■□□□ 1.55
IPO4-208ENST00000559253 LTBP4Q8N2S1 1624 aa24.73■■□□□ 1.55
IPO4-208ENST00000559253 ARHGAP23Q9P227 1491 aa24.73■■□□□ 1.55
IPO4-208ENST00000559253 NAIPQ13075 1403 aa24.73■■□□□ 1.55
IPO4-208ENST00000559253 NUP155O75694 1391 aa24.73■■□□□ 1.55
IPO4-208ENST00000559253 SYNMO15061 1565 aa24.72■■□□□ 1.55
IPO4-208ENST00000559253 IQSEC2Q5JU85 1478 aa24.72■■□□□ 1.55
IPO4-208ENST00000559253 HFM1A2PYH4 1435 aa24.72■■□□□ 1.55
IPO4-208ENST00000559253 CFAP65Q6ZU64 1925 aaKnown RBP24.72■■□□□ 1.55
IPO4-208ENST00000559253 IDI1Q13907 227 aa24.71■■□□□ 1.55
IPO4-208ENST00000559253 NPHP4O75161 1426 aaPredicted RBP24.69■■□□□ 1.54
IPO4-208ENST00000559253 PIK3C2BO00750 1634 aa24.69■■□□□ 1.54
IPO4-208ENST00000559253 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
IPO4-208ENST00000559253 SCAF11Q99590 1463 aaKnown RBP24.67■■□□□ 1.54
IPO4-208ENST00000559253 STAG3Q9UJ98 1225 aa24.65■■□□□ 1.54
IPO4-208ENST00000559253 ADGRB3O60242 1522 aa24.65■■□□□ 1.54
IPO4-208ENST00000559253 EID1Q9Y6B2 187 aa24.64■■□□□ 1.54
IPO4-208ENST00000559253 E9PCH4 1651 aa24.64■■□□□ 1.53
IPO4-208ENST00000559253 ZNF335Q9H4Z2 1342 aaPredicted RBP24.63■■□□□ 1.53
IPO4-208ENST00000559253 IQGAP1P46940 1657 aa24.62■■□□□ 1.53
IPO4-208ENST00000559253 TXNDC2Q86VQ3 553 aa24.61■■□□□ 1.53
IPO4-208ENST00000559253 LTKP29376 864 aa24.6■■□□□ 1.53
IPO4-208ENST00000559253 CPS1P31327 1500 aa24.6■■□□□ 1.53
IPO4-208ENST00000559253 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
IPO4-208ENST00000559253 HDGFP51858 240 aaKnown RBP24.55■■□□□ 1.52
IPO4-208ENST00000559253 TMEM131LA2VDJ0 1609 aa24.54■■□□□ 1.52
IPO4-208ENST00000559253 ZFYVE9O95405 1425 aa24.52■■□□□ 1.52
IPO4-208ENST00000559253 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.49■■□□□ 1.51
IPO4-208ENST00000559253 SPHKAPQ2M3C7 1700 aa24.48■■□□□ 1.51
IPO4-208ENST00000559253 RIMS2Q9UQ26 1411 aa24.47■■□□□ 1.51
IPO4-208ENST00000559253 TRPM2O94759 1503 aa24.46■■□□□ 1.51
IPO4-208ENST00000559253 PLEKHG1Q9ULL1 1385 aa24.46■■□□□ 1.51
IPO4-208ENST00000559253 TRIM52Q96A61 297 aa24.46■■□□□ 1.51
IPO4-208ENST00000559253 SLC4A1APQ9BWU0 796 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms