RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
PCAT29-202ENST00000558941 ARHGAP5Q13017 1502 aa13.39□□□□□ -0.27
PCAT29-202ENST00000558941 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
PCAT29-202ENST00000558941 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
PCAT29-202ENST00000558941 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
PCAT29-202ENST00000558941 UGGT1Q9NYU2 1555 aa13.35□□□□□ -0.27
PCAT29-202ENST00000558941 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
PCAT29-202ENST00000558941 SAMD9LQ8IVG5 1584 aa13.34□□□□□ -0.27
PCAT29-202ENST00000558941 TNRQ92752 1358 aa13.33□□□□□ -0.27
PCAT29-202ENST00000558941 KDM5DQ9BY66 1539 aa13.33□□□□□ -0.28
PCAT29-202ENST00000558941 NHSL1Q5SYE7 1610 aa13.32□□□□□ -0.28
PCAT29-202ENST00000558941 FBXO31Q5XUX0 539 aaPredicted RBP13.32□□□□□ -0.28
PCAT29-202ENST00000558941 FAM9AQ8IZU1 332 aaPredicted RBP13.32□□□□□ -0.28
PCAT29-202ENST00000558941 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
PCAT29-202ENST00000558941 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
PCAT29-202ENST00000558941 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
PCAT29-202ENST00000558941 SPATA31A6Q5VVP1 1343 aa13.31□□□□□ -0.28
PCAT29-202ENST00000558941 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
PCAT29-202ENST00000558941 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
PCAT29-202ENST00000558941 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
PCAT29-202ENST00000558941 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
PCAT29-202ENST00000558941 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
PCAT29-202ENST00000558941 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
PCAT29-202ENST00000558941 ATAD2Q6PL18 1390 aa13.29□□□□□ -0.28
PCAT29-202ENST00000558941 FGD6Q6ZV73 1430 aa13.29□□□□□ -0.28
PCAT29-202ENST00000558941 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
PCAT29-202ENST00000558941 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
PCAT29-202ENST00000558941 FAM135AQ9P2D6 1515 aa13.28□□□□□ -0.28
PCAT29-202ENST00000558941 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
PCAT29-202ENST00000558941 YY1P25490 414 aa13.27□□□□□ -0.29
PCAT29-202ENST00000558941 AFF2P51816 1311 aa13.27□□□□□ -0.29
PCAT29-202ENST00000558941 PZPP20742 1482 aa13.27□□□□□ -0.29
PCAT29-202ENST00000558941 NLRP1Q9C000 1473 aa13.27□□□□□ -0.29
PCAT29-202ENST00000558941 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
PCAT29-202ENST00000558941 A2MP01023 1474 aa13.25□□□□□ -0.29
PCAT29-202ENST00000558941 THEMISQ8N1K5 641 aaPredicted RBP13.25□□□□□ -0.29
PCAT29-202ENST00000558941 GGT6Q6P531 493 aa13.24□□□□□ -0.29
PCAT29-202ENST00000558941 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
PCAT29-202ENST00000558941 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
PCAT29-202ENST00000558941 FOXD1Q16676 465 aa13.23□□□□□ -0.29
PCAT29-202ENST00000558941 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
PCAT29-202ENST00000558941 AHDC1Q5TGY3 1603 aaPredicted RBP13.23□□□□□ -0.29
PCAT29-202ENST00000558941 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
PCAT29-202ENST00000558941 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
PCAT29-202ENST00000558941 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
PCAT29-202ENST00000558941 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
PCAT29-202ENST00000558941 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
PCAT29-202ENST00000558941 SCAF11Q99590 1463 aaKnown RBP13.19□□□□□ -0.3
PCAT29-202ENST00000558941 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
PCAT29-202ENST00000558941 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
PCAT29-202ENST00000558941 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
PCAT29-202ENST00000558941 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
PCAT29-202ENST00000558941 UTRNP46939 3433 aa13.17□□□□□ -0.3
PCAT29-202ENST00000558941 QTRT2Q9H974 415 aaKnown RBP13.17□□□□□ -0.3
PCAT29-202ENST00000558941 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
PCAT29-202ENST00000558941 TROQ12816 1431 aaPredicted RBP13.16□□□□□ -0.3
PCAT29-202ENST00000558941 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
PCAT29-202ENST00000558941 NCOA2Q15596 1464 aa13.16□□□□□ -0.3
PCAT29-202ENST00000558941 LTKP29376 864 aa13.15□□□□□ -0.3
PCAT29-202ENST00000558941 HRCP23327 699 aa13.14□□□□□ -0.31
PCAT29-202ENST00000558941 MAST1Q9Y2H9 1570 aa13.14□□□□□ -0.31
PCAT29-202ENST00000558941 SLIT1O75093 1534 aa13.13□□□□□ -0.31
PCAT29-202ENST00000558941 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
PCAT29-202ENST00000558941 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
PCAT29-202ENST00000558941 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
PCAT29-202ENST00000558941 ABCC3O15438 1527 aa13.11□□□□□ -0.31
PCAT29-202ENST00000558941 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
PCAT29-202ENST00000558941 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
PCAT29-202ENST00000558941 CHIC1Q5VXU3 224 aa13.09□□□□□ -0.31
PCAT29-202ENST00000558941 TET3O43151 1660 aa13.08□□□□□ -0.31
PCAT29-202ENST00000558941 MSH6P52701 1360 aa13.08□□□□□ -0.31
PCAT29-202ENST00000558941 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
PCAT29-202ENST00000558941 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
PCAT29-202ENST00000558941 C8orf37Q96NL8 207 aa13.07□□□□□ -0.32
PCAT29-202ENST00000558941 KCNA6P17658 529 aa13.06□□□□□ -0.32
PCAT29-202ENST00000558941 PROSER2Q86WR7 435 aaPredicted RBP13.06□□□□□ -0.32
PCAT29-202ENST00000558941 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
PCAT29-202ENST00000558941 HNRNPMP52272 730 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCAT29-202ENST00000558941 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
PCAT29-202ENST00000558941 CLIP1P30622 1438 aa13.04□□□□□ -0.32
PCAT29-202ENST00000558941 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
PCAT29-202ENST00000558941 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
PCAT29-202ENST00000558941 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.03□□□□□ -0.32
PCAT29-202ENST00000558941 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
PCAT29-202ENST00000558941 ATRNO75882 1429 aa13.03□□□□□ -0.32
PCAT29-202ENST00000558941 SETD5Q9C0A6 1442 aa13.03□□□□□ -0.32
PCAT29-202ENST00000558941 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
PCAT29-202ENST00000558941 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
PCAT29-202ENST00000558941 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
PCAT29-202ENST00000558941 CAMSAP2Q08AD1 1489 aa13□□□□□ -0.33
PCAT29-202ENST00000558941 CHD2O14647 1828 aaKnown RBP12.99□□□□□ -0.33
PCAT29-202ENST00000558941 UNC13BO14795 1591 aa12.98□□□□□ -0.33
PCAT29-202ENST00000558941 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
PCAT29-202ENST00000558941 DHX29Q7Z478 1369 aaKnown RBP12.98□□□□□ -0.33
PCAT29-202ENST00000558941 PNPLA6Q8IY17 1366 aa12.98□□□□□ -0.33
PCAT29-202ENST00000558941 RTEL1-TNFRSF6BF6WH68 1400 aa12.97□□□□□ -0.33
PCAT29-202ENST00000558941 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
PCAT29-202ENST00000558941 PIK3C2BO00750 1634 aa12.97□□□□□ -0.33
PCAT29-202ENST00000558941 ASXL1Q8IXJ9 1541 aa12.97□□□□□ -0.33
PCAT29-202ENST00000558941 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms