RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
TRAF3-206ENST00000558880 HECW1Q76N89 1606 aa11.46□□□□□ -0.58
TRAF3-206ENST00000558880 GLI2P10070 1586 aa11.45□□□□□ -0.58
TRAF3-206ENST00000558880 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
TRAF3-206ENST00000558880 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
TRAF3-206ENST00000558880 ZCCHC11Q5TAX3 1644 aaKnown RBP11.45□□□□□ -0.58
TRAF3-206ENST00000558880 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
TRAF3-206ENST00000558880 ILDR2Q71H61 639 aa11.44□□□□□ -0.58
TRAF3-206ENST00000558880 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
TRAF3-206ENST00000558880 ATP1B4Q9UN42 357 aaPredicted RBP11.43□□□□□ -0.58
TRAF3-206ENST00000558880 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
TRAF3-206ENST00000558880 TIAM1Q13009 1591 aa11.42□□□□□ -0.58
TRAF3-206ENST00000558880 SOCS7O14512 581 aa11.42□□□□□ -0.58
TRAF3-206ENST00000558880 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
TRAF3-206ENST00000558880 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
TRAF3-206ENST00000558880 SLC39A7Q92504 469 aa11.41□□□□□ -0.58
TRAF3-206ENST00000558880 MAP3K4Q9Y6R4 1608 aa11.41□□□□□ -0.58
TRAF3-206ENST00000558880 LRRC9Q6ZRR7 1453 aa11.4□□□□□ -0.58
TRAF3-206ENST00000558880 WDR7Q9Y4E6 1490 aa11.4□□□□□ -0.58
TRAF3-206ENST00000558880 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
TRAF3-206ENST00000558880 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
TRAF3-206ENST00000558880 DISP3Q9P2K9 1392 aa11.39□□□□□ -0.59
TRAF3-206ENST00000558880 C7P10643 843 aa11.38□□□□□ -0.59
TRAF3-206ENST00000558880 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
TRAF3-206ENST00000558880 CFAP43Q8NDM7 1665 aa11.38□□□□□ -0.59
TRAF3-206ENST00000558880 PLEKHD1A6NEE1 506 aa11.37□□□□□ -0.59
TRAF3-206ENST00000558880 STK25O00506 426 aa11.37□□□□□ -0.59
TRAF3-206ENST00000558880 BCL11BQ9C0K0 894 aaPredicted RBP11.37□□□□□ -0.59
TRAF3-206ENST00000558880 PPARGC1BQ86YN6 1023 aaKnown RBP11.36□□□□□ -0.59
TRAF3-206ENST00000558880 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
TRAF3-206ENST00000558880 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
TRAF3-206ENST00000558880 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
TRAF3-206ENST00000558880 KIF14Q15058 1648 aa11.35□□□□□ -0.59
TRAF3-206ENST00000558880 POTEFA5A3E0 1075 aa11.34□□□□□ -0.59
TRAF3-206ENST00000558880 SEC24BO95487 1268 aa11.34□□□□□ -0.59
TRAF3-206ENST00000558880 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
TRAF3-206ENST00000558880 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
TRAF3-206ENST00000558880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAF3-206ENST00000558880 MTUS2Q5JR59 1369 aa11.33□□□□□ -0.6
TRAF3-206ENST00000558880 PHLDB1Q86UU1 1377 aa11.33□□□□□ -0.6
TRAF3-206ENST00000558880 IER5LQ5T953 404 aa11.33□□□□□ -0.6
TRAF3-206ENST00000558880 EFCAB3Q8N7B9 438 aa11.33□□□□□ -0.6
TRAF3-206ENST00000558880 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
TRAF3-206ENST00000558880 CDK11AQ9UQ88 783 aaPredicted RBP11.32□□□□□ -0.6
TRAF3-206ENST00000558880 PTPRMP28827 1452 aa11.32□□□□□ -0.6
TRAF3-206ENST00000558880 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
TRAF3-206ENST00000558880 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
TRAF3-206ENST00000558880 TTC37Q6PGP7 1564 aa11.31□□□□□ -0.6
TRAF3-206ENST00000558880 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
TRAF3-206ENST00000558880 ABCA9Q8IUA7 1624 aa11.29□□□□□ -0.6
TRAF3-206ENST00000558880 PLCG2P16885 1265 aa11.29□□□□□ -0.6
TRAF3-206ENST00000558880 IRX5P78411 483 aaPredicted RBP11.29□□□□□ -0.6
TRAF3-206ENST00000558880 LHX8Q68G74 356 aa11.29□□□□□ -0.6
TRAF3-206ENST00000558880 PLCH2O75038 1416 aa11.28□□□□□ -0.6
TRAF3-206ENST00000558880 CD109Q6YHK3 1445 aa11.28□□□□□ -0.6
TRAF3-206ENST00000558880 CERKQ8TCT0 537 aa11.28□□□□□ -0.6
TRAF3-206ENST00000558880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAF3-206ENST00000558880 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.61
TRAF3-206ENST00000558880 HSPA2P54652 639 aa11.26□□□□□ -0.61
TRAF3-206ENST00000558880 OCEL1Q9H607 264 aa11.26□□□□□ -0.61
TRAF3-206ENST00000558880 ARID4BQ4LE39 1312 aaPredicted RBP11.26□□□□□ -0.61
TRAF3-206ENST00000558880 ZNF644Q9H582 1327 aaPredicted RBP11.25□□□□□ -0.61
TRAF3-206ENST00000558880 HS6ST3Q8IZP7 471 aa11.24□□□□□ -0.61
TRAF3-206ENST00000558880 MYOM3Q5VTT5 1437 aa11.24□□□□□ -0.61
TRAF3-206ENST00000558880 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
TRAF3-206ENST00000558880 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
TRAF3-206ENST00000558880 PHF8Q9UPP1 1060 aa11.23□□□□□ -0.61
TRAF3-206ENST00000558880 CCNB3Q8WWL7 1395 aa11.23□□□□□ -0.61
TRAF3-206ENST00000558880 ARAP3Q8WWN8 1544 aa11.23□□□□□ -0.61
TRAF3-206ENST00000558880 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
TRAF3-206ENST00000558880 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
TRAF3-206ENST00000558880 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
TRAF3-206ENST00000558880 SPATA31D1Q6ZQQ2 1576 aa11.22□□□□□ -0.61
TRAF3-206ENST00000558880 FGD6Q6ZV73 1430 aa11.22□□□□□ -0.61
TRAF3-206ENST00000558880 MADDQ8WXG6 1647 aa11.22□□□□□ -0.61
TRAF3-206ENST00000558880 RRBP1Q9P2E9 1410 aaKnown RBP11.22□□□□□ -0.61
TRAF3-206ENST00000558880 TCOF1Q13428 1488 aaKnown RBP11.21□□□□□ -0.61
TRAF3-206ENST00000558880 MIA2Q96PC5 1412 aa11.21□□□□□ -0.61
TRAF3-206ENST00000558880 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.62
TRAF3-206ENST00000558880 CDC42BPBQ9Y5S2 1711 aa11.21□□□□□ -0.62
TRAF3-206ENST00000558880 PREX2Q70Z35 1606 aa11.2□□□□□ -0.62
TRAF3-206ENST00000558880 MBD5Q9P267 1494 aa11.2□□□□□ -0.62
TRAF3-206ENST00000558880 BCORL1Q5H9F3 1711 aa11.2□□□□□ -0.62
TRAF3-206ENST00000558880 FANCAO15360 1455 aa11.19□□□□□ -0.62
TRAF3-206ENST00000558880 CFDP1Q9UEE9 299 aaPredicted RBP11.19□□□□□ -0.62
TRAF3-206ENST00000558880 SAMD9LQ8IVG5 1584 aa11.19□□□□□ -0.62
TRAF3-206ENST00000558880 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 RIMS1Q86UR5 1692 aaKnown RBP11.18□□□□□ -0.62
TRAF3-206ENST00000558880 SOX12O15370 315 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 EFCAB2Q5VUJ9 269 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 MFRPQ9BY79 579 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 NEO1Q92859 1461 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 TRAPPC8Q9Y2L5 1435 aa11.18□□□□□ -0.62
TRAF3-206ENST00000558880 ARHGAP5Q13017 1502 aa11.17□□□□□ -0.62
TRAF3-206ENST00000558880 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
TRAF3-206ENST00000558880 ABCC1P33527 1531 aa11.16□□□□□ -0.62
TRAF3-206ENST00000558880 MS4A4AQ96JQ5 239 aa11.16□□□□□ -0.62
TRAF3-206ENST00000558880 CAMSAP2Q08AD1 1489 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms