RNA–Protein interactions for RNA: ENST00000558869.1

ALDH1A3-205, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-205ENST00000558869 DNMT1P26358 1616 aaKnown RBP23■■□□□ 1.27
ALDH1A3-205ENST00000558869 RNF17Q9BXT8 1623 aaKnown RBP23■■□□□ 1.27
ALDH1A3-205ENST00000558869 ABCC5O15440 1437 aa22.99■■□□□ 1.27
ALDH1A3-205ENST00000558869 ZNF142P52746 1687 aaPredicted RBP22.99■■□□□ 1.27
ALDH1A3-205ENST00000558869 MYO3AQ8NEV4 1616 aa22.98■■□□□ 1.27
ALDH1A3-205ENST00000558869 ILDR1Q86SU0 546 aaPredicted RBP22.98■■□□□ 1.27
ALDH1A3-205ENST00000558869 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
ALDH1A3-205ENST00000558869 DAPK1P53355 1430 aa22.97■■□□□ 1.27
ALDH1A3-205ENST00000558869 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
ALDH1A3-205ENST00000558869 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
ALDH1A3-205ENST00000558869 WASHC2CQ9Y4E1 1318 aa22.95■■□□□ 1.26
ALDH1A3-205ENST00000558869 PZPP20742 1482 aa22.94■■□□□ 1.26
ALDH1A3-205ENST00000558869 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
ALDH1A3-205ENST00000558869 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
ALDH1A3-205ENST00000558869 KIF15Q9NS87 1388 aa22.91■■□□□ 1.26
ALDH1A3-205ENST00000558869 CAMSAP1Q5T5Y3 1602 aa22.91■■□□□ 1.26
ALDH1A3-205ENST00000558869 MROH1Q8NDA8 1641 aa22.91■■□□□ 1.26
ALDH1A3-205ENST00000558869 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
ALDH1A3-205ENST00000558869 PTPRTO14522 1441 aa22.9■■□□□ 1.26
ALDH1A3-205ENST00000558869 ABCC3O15438 1527 aa22.89■■□□□ 1.26
ALDH1A3-205ENST00000558869 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
ALDH1A3-205ENST00000558869 PLA2R1Q13018 1463 aa22.87■■□□□ 1.25
ALDH1A3-205ENST00000558869 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
ALDH1A3-205ENST00000558869 TNRQ92752 1358 aa22.86■■□□□ 1.25
ALDH1A3-205ENST00000558869 ANKRD30AQ9BXX3 1397 aa22.86■■□□□ 1.25
ALDH1A3-205ENST00000558869 CEP152O94986 1710 aa22.85■■□□□ 1.25
ALDH1A3-205ENST00000558869 FBXO31Q5XUX0 539 aaPredicted RBP22.85■■□□□ 1.25
ALDH1A3-205ENST00000558869 FBXO41Q8TF61 875 aa22.85■■□□□ 1.25
ALDH1A3-205ENST00000558869 PRDM15P57071 1507 aaPredicted RBP22.85■■□□□ 1.25
ALDH1A3-205ENST00000558869 DEPDC5O75140 1603 aa22.85■■□□□ 1.25
ALDH1A3-205ENST00000558869 ADGRL2O95490 1459 aa22.84■■□□□ 1.25
ALDH1A3-205ENST00000558869 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
ALDH1A3-205ENST00000558869 SPATA31D1Q6ZQQ2 1576 aa22.8■■□□□ 1.24
ALDH1A3-205ENST00000558869 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
ALDH1A3-205ENST00000558869 CHIC2Q9UKJ5 165 aa22.8■■□□□ 1.24
ALDH1A3-205ENST00000558869 PKD2Q13563 968 aa22.79■■□□□ 1.24
ALDH1A3-205ENST00000558869 CERKQ8TCT0 537 aa22.79■■□□□ 1.24
ALDH1A3-205ENST00000558869 CFAP65Q6ZU64 1925 aaKnown RBP22.78■■□□□ 1.24
ALDH1A3-205ENST00000558869 ERVK-7P63135 1459 aa22.77■■□□□ 1.24
ALDH1A3-205ENST00000558869 ARHGAP31Q2M1Z3 1444 aa22.76■■□□□ 1.23
ALDH1A3-205ENST00000558869 NCKAP5LQ9HCH0 1330 aa22.76■■□□□ 1.23
ALDH1A3-205ENST00000558869 POLR1AO95602 1720 aaPredicted RBP22.75■■□□□ 1.23
ALDH1A3-205ENST00000558869 KANK1Q14678 1352 aa22.74■■□□□ 1.23
ALDH1A3-205ENST00000558869 VWDEQ8N2E2 1590 aa22.73■■□□□ 1.23
ALDH1A3-205ENST00000558869 UGGT1Q9NYU2 1555 aa22.73■■□□□ 1.23
ALDH1A3-205ENST00000558869 LTBP4Q8N2S1 1624 aa22.72■■□□□ 1.23
ALDH1A3-205ENST00000558869 LMTK2Q8IWU2 1503 aa22.72■■□□□ 1.23
ALDH1A3-205ENST00000558869 THEMISQ8N1K5 641 aaPredicted RBP22.7■■□□□ 1.22
ALDH1A3-205ENST00000558869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.7■■□□□ 1.22
ALDH1A3-205ENST00000558869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.7■■□□□ 1.22
ALDH1A3-205ENST00000558869 ANKRD50Q9ULJ7 1429 aa22.7■■□□□ 1.22
ALDH1A3-205ENST00000558869 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
ALDH1A3-205ENST00000558869 ROCK1Q13464 1354 aa22.66■■□□□ 1.22
ALDH1A3-205ENST00000558869 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
ALDH1A3-205ENST00000558869 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
ALDH1A3-205ENST00000558869 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.21
ALDH1A3-205ENST00000558869 IQSEC2Q5JU85 1478 aa22.64■■□□□ 1.21
ALDH1A3-205ENST00000558869 EFCAB6Q5THR3 1501 aa22.63■■□□□ 1.21
ALDH1A3-205ENST00000558869 MED14O60244 1454 aa22.62■■□□□ 1.21
ALDH1A3-205ENST00000558869 UNC13BO14795 1591 aa22.61■■□□□ 1.21
ALDH1A3-205ENST00000558869 ZNF335Q9H4Z2 1342 aaPredicted RBP22.59■■□□□ 1.21
ALDH1A3-205ENST00000558869 KDM5AP29375 1690 aaKnown RBP22.59■■□□□ 1.21
ALDH1A3-205ENST00000558869 TET3O43151 1660 aa22.58■■□□□ 1.21
ALDH1A3-205ENST00000558869 RPRD2Q5VT52 1461 aaKnown RBP22.58■■□□□ 1.2
ALDH1A3-205ENST00000558869 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
ALDH1A3-205ENST00000558869 PIK3C2BO00750 1634 aa22.57■■□□□ 1.2
ALDH1A3-205ENST00000558869 IQGAP1P46940 1657 aa22.57■■□□□ 1.2
ALDH1A3-205ENST00000558869 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
ALDH1A3-205ENST00000558869 NOS1P29475 1434 aa22.57■■□□□ 1.2
ALDH1A3-205ENST00000558869 GCC2Q8IWJ2 1684 aa22.56■■□□□ 1.2
ALDH1A3-205ENST00000558869 SLIT1O75093 1534 aa22.56■■□□□ 1.2
ALDH1A3-205ENST00000558869 SYNMO15061 1565 aa22.55■■□□□ 1.2
ALDH1A3-205ENST00000558869 ARHGAP23Q9P227 1491 aa22.55■■□□□ 1.2
ALDH1A3-205ENST00000558869 ITGAEP38570 1179 aa22.53■■□□□ 1.2
ALDH1A3-205ENST00000558869 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
ALDH1A3-205ENST00000558869 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
ALDH1A3-205ENST00000558869 CPS1P31327 1500 aa22.51■■□□□ 1.19
ALDH1A3-205ENST00000558869 IDI1Q13907 227 aa22.5■■□□□ 1.19
ALDH1A3-205ENST00000558869 SLC52A1Q9NWF4 448 aa22.49■■□□□ 1.19
ALDH1A3-205ENST00000558869 E9PCH4 1651 aa22.48■■□□□ 1.19
ALDH1A3-205ENST00000558869 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
ALDH1A3-205ENST00000558869 TMEM2Q9UHN6 1383 aa22.47■■□□□ 1.19
ALDH1A3-205ENST00000558869 ADGRB3O60242 1522 aa22.47■■□□□ 1.19
ALDH1A3-205ENST00000558869 LTKP29376 864 aa22.45■■□□□ 1.18
ALDH1A3-205ENST00000558869 TXNDC2Q86VQ3 553 aa22.45■■□□□ 1.18
ALDH1A3-205ENST00000558869 EID1Q9Y6B2 187 aa22.45■■□□□ 1.18
ALDH1A3-205ENST00000558869 NUP155O75694 1391 aa22.43■■□□□ 1.18
ALDH1A3-205ENST00000558869 STRCP1A6NGW2 1772 aa22.42■■□□□ 1.18
ALDH1A3-205ENST00000558869 MYO5BQ9ULV0 1848 aa22.41■■□□□ 1.18
ALDH1A3-205ENST00000558869 NAIPQ13075 1403 aa22.39■■□□□ 1.17
ALDH1A3-205ENST00000558869 TMEM131LA2VDJ0 1609 aa22.39■■□□□ 1.17
ALDH1A3-205ENST00000558869 UBAP1LF5GYI3 381 aa22.36■■□□□ 1.17
ALDH1A3-205ENST00000558869 HFM1A2PYH4 1435 aa22.34■■□□□ 1.17
ALDH1A3-205ENST00000558869 ZFYVE9O95405 1425 aa22.33■■□□□ 1.17
ALDH1A3-205ENST00000558869 LRRC7Q96NW7 1537 aa22.33■■□□□ 1.17
ALDH1A3-205ENST00000558869 SPHKAPQ2M3C7 1700 aa22.33■■□□□ 1.17
ALDH1A3-205ENST00000558869 HDGFP51858 240 aaKnown RBP22.3■■□□□ 1.16
ALDH1A3-205ENST00000558869 TOM1O60784 492 aa22.29■■□□□ 1.16
ALDH1A3-205ENST00000558869 RIMS2Q9UQ26 1411 aa22.29■■□□□ 1.16
ALDH1A3-205ENST00000558869 XIRP1Q702N8 1843 aaKnown RBP22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms