RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TNRQ92752 1358 aa25.57■■□□□ 1.68
CDC42BPB-203ENST00000558867 FAM135AQ9P2D6 1515 aa25.57■■□□□ 1.68
CDC42BPB-203ENST00000558867 DNMT1P26358 1616 aaKnown RBP25.56■■□□□ 1.68
CDC42BPB-203ENST00000558867 WASHC2CQ9Y4E1 1318 aa25.56■■□□□ 1.68
CDC42BPB-203ENST00000558867 TOM1O60784 492 aa25.55■■□□□ 1.68
CDC42BPB-203ENST00000558867 SCAF1Q9H7N4 1312 aaKnown RBP25.55■■□□□ 1.68
CDC42BPB-203ENST00000558867 CCDC141Q6ZP82 1450 aa25.54■■□□□ 1.68
CDC42BPB-203ENST00000558867 ANKLE2Q86XL3 938 aa25.54■■□□□ 1.68
CDC42BPB-203ENST00000558867 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
CDC42BPB-203ENST00000558867 TSPY4P0CV99 314 aa25.52■■□□□ 1.68
CDC42BPB-203ENST00000558867 TSPY10P0CW01 314 aa25.52■■□□□ 1.68
CDC42BPB-203ENST00000558867 CPS1P31327 1500 aa25.52■■□□□ 1.68
CDC42BPB-203ENST00000558867 KDM5DQ9BY66 1539 aa25.52■■□□□ 1.68
CDC42BPB-203ENST00000558867 PZPP20742 1482 aa25.51■■□□□ 1.67
CDC42BPB-203ENST00000558867 FBXO31Q5XUX0 539 aaPredicted RBP25.5■■□□□ 1.67
CDC42BPB-203ENST00000558867 POLR1AO95602 1720 aaPredicted RBP25.49■■□□□ 1.67
CDC42BPB-203ENST00000558867 PIP4K2BP78356 416 aa25.48■■□□□ 1.67
CDC42BPB-203ENST00000558867 SHANK2Q9UPX8 1470 aa25.47■■□□□ 1.67
CDC42BPB-203ENST00000558867 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
CDC42BPB-203ENST00000558867 NLRP1Q9C000 1473 aa25.46■■□□□ 1.67
CDC42BPB-203ENST00000558867 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
CDC42BPB-203ENST00000558867 NCOA2Q15596 1464 aa25.45■■□□□ 1.66
CDC42BPB-203ENST00000558867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.66
CDC42BPB-203ENST00000558867 HSPA1LP34931 641 aa25.42■■□□□ 1.66
CDC42BPB-203ENST00000558867 NEURL4Q96JN8 1562 aa25.41■■□□□ 1.66
CDC42BPB-203ENST00000558867 UGGT1Q9NYU2 1555 aa25.41■■□□□ 1.66
CDC42BPB-203ENST00000558867 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.65
CDC42BPB-203ENST00000558867 NPHP4O75161 1426 aaPredicted RBP25.38■■□□□ 1.65
CDC42BPB-203ENST00000558867 MED14O60244 1454 aa25.36■■□□□ 1.65
CDC42BPB-203ENST00000558867 DEPDC5O75140 1603 aa25.36■■□□□ 1.65
CDC42BPB-203ENST00000558867 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
CDC42BPB-203ENST00000558867 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
CDC42BPB-203ENST00000558867 MED1Q15648 1581 aaPredicted RBP25.31■■□□□ 1.64
CDC42BPB-203ENST00000558867 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
CDC42BPB-203ENST00000558867 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
CDC42BPB-203ENST00000558867 RNF17Q9BXT8 1623 aaKnown RBP25.28■■□□□ 1.64
CDC42BPB-203ENST00000558867 ABCC3O15438 1527 aa25.27■■□□□ 1.64
CDC42BPB-203ENST00000558867 MAST1Q9Y2H9 1570 aa25.26■■□□□ 1.63
CDC42BPB-203ENST00000558867 LRRC9Q6ZRR7 1453 aa25.25■■□□□ 1.63
CDC42BPB-203ENST00000558867 EIF2AK4Q9P2K8 1649 aaKnown RBP25.25■■□□□ 1.63
CDC42BPB-203ENST00000558867 ERVK-7P63135 1459 aa25.23■■□□□ 1.63
CDC42BPB-203ENST00000558867 SYNMO15061 1565 aa25.2■■□□□ 1.62
CDC42BPB-203ENST00000558867 MYOM3Q5VTT5 1437 aa25.2■■□□□ 1.62
CDC42BPB-203ENST00000558867 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.62
CDC42BPB-203ENST00000558867 LRRC7Q96NW7 1537 aa25.19■■□□□ 1.62
CDC42BPB-203ENST00000558867 EID1Q9Y6B2 187 aa25.18■■□□□ 1.62
CDC42BPB-203ENST00000558867 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
CDC42BPB-203ENST00000558867 SCAF11Q99590 1463 aaKnown RBP25.16■■□□□ 1.62
CDC42BPB-203ENST00000558867 TXNDC2Q86VQ3 553 aa25.16■■□□□ 1.62
CDC42BPB-203ENST00000558867 MAP3K1Q13233 1512 aa25.14■■□□□ 1.62
CDC42BPB-203ENST00000558867 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
CDC42BPB-203ENST00000558867 UBR1Q8IWV7 1749 aa25.13■■□□□ 1.61
CDC42BPB-203ENST00000558867 CFAP65Q6ZU64 1925 aaKnown RBP25.13■■□□□ 1.61
CDC42BPB-203ENST00000558867 ALKQ9UM73 1620 aa25.12■■□□□ 1.61
CDC42BPB-203ENST00000558867 STAG3Q9UJ98 1225 aa25.12■■□□□ 1.61
CDC42BPB-203ENST00000558867 CEP152O94986 1710 aa25.12■■□□□ 1.61
CDC42BPB-203ENST00000558867 ARHGAP31Q2M1Z3 1444 aa25.12■■□□□ 1.61
CDC42BPB-203ENST00000558867 MROH1Q8NDA8 1641 aa25.11■■□□□ 1.61
CDC42BPB-203ENST00000558867 STRCP1A6NGW2 1772 aa25.1■■□□□ 1.61
CDC42BPB-203ENST00000558867 KANK1Q14678 1352 aa25.1■■□□□ 1.61
CDC42BPB-203ENST00000558867 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
CDC42BPB-203ENST00000558867 SLIT1O75093 1534 aa25.09■■□□□ 1.61
CDC42BPB-203ENST00000558867 KANK4Q5T7N3 995 aaPredicted RBP25.09■■□□□ 1.61
CDC42BPB-203ENST00000558867 LTKP29376 864 aa25.08■■□□□ 1.61
CDC42BPB-203ENST00000558867 APLP2Q06481 763 aa25.08■■□□□ 1.61
CDC42BPB-203ENST00000558867 ERBINQ96RT1 1412 aa25.08■■□□□ 1.61
CDC42BPB-203ENST00000558867 ARHGAP23Q9P227 1491 aa25.08■■□□□ 1.6
CDC42BPB-203ENST00000558867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.07■■□□□ 1.61e-6■□□□□ 8.7
CDC42BPB-203ENST00000558867 RRP7BPQ9NSQ0 103 aa25.06■■□□□ 1.6
CDC42BPB-203ENST00000558867 PRDM15P57071 1507 aaPredicted RBP25.05■■□□□ 1.6
CDC42BPB-203ENST00000558867 TMEM2Q9UHN6 1383 aa25.02■■□□□ 1.6
CDC42BPB-203ENST00000558867 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
CDC42BPB-203ENST00000558867 ABCC5O15440 1437 aa24.99■■□□□ 1.59
CDC42BPB-203ENST00000558867 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
CDC42BPB-203ENST00000558867 PIK3C2BO00750 1634 aa24.97■■□□□ 1.59
CDC42BPB-203ENST00000558867 KCNA6P17658 529 aa24.96■■□□□ 1.59
CDC42BPB-203ENST00000558867 CROCC2H7BZ55 1655 aa24.96■■□□□ 1.59
CDC42BPB-203ENST00000558867 PTPN23Q9H3S7 1636 aa24.96■■□□□ 1.59
CDC42BPB-203ENST00000558867 ANKRD30AQ9BXX3 1397 aa24.95■■□□□ 1.59
CDC42BPB-203ENST00000558867 KDM5AP29375 1690 aaKnown RBP24.95■■□□□ 1.58
CDC42BPB-203ENST00000558867 EFCAB6Q5THR3 1501 aa24.95■■□□□ 1.58
CDC42BPB-203ENST00000558867 IDI1Q13907 227 aa24.94■■□□□ 1.58
CDC42BPB-203ENST00000558867 PROSER2Q86WR7 435 aaPredicted RBP24.94■■□□□ 1.58
CDC42BPB-203ENST00000558867 DAPK1P53355 1430 aa24.94■■□□□ 1.58
CDC42BPB-203ENST00000558867 TMEM94Q12767 1356 aa24.93■■□□□ 1.58
CDC42BPB-203ENST00000558867 BCANQ96GW7 911 aa24.92■■□□□ 1.58
CDC42BPB-203ENST00000558867 XIRP1Q702N8 1843 aaKnown RBP24.91■■□□□ 1.58
CDC42BPB-203ENST00000558867 SLC52A1Q9NWF4 448 aa24.91■■□□□ 1.58
CDC42BPB-203ENST00000558867 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
CDC42BPB-203ENST00000558867 SLC26A8Q96RN1 970 aa24.89■■□□□ 1.58
CDC42BPB-203ENST00000558867 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.58
CDC42BPB-203ENST00000558867 HDGFP51858 240 aaKnown RBP24.88■■□□□ 1.57
CDC42BPB-203ENST00000558867 RGS17Q9UGC6 210 aaPredicted RBP24.88■■□□□ 1.57
CDC42BPB-203ENST00000558867 FGD6Q6ZV73 1430 aa24.87■■□□□ 1.57
CDC42BPB-203ENST00000558867 MSH6P52701 1360 aa24.85■■□□□ 1.57
CDC42BPB-203ENST00000558867 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.57
CDC42BPB-203ENST00000558867 TET3O43151 1660 aa24.83■■□□□ 1.57
CDC42BPB-203ENST00000558867 NOS1P29475 1434 aa24.83■■□□□ 1.57
CDC42BPB-203ENST00000558867 ADGRB3O60242 1522 aa24.82■■□□□ 1.56
CDC42BPB-203ENST00000558867 PPP1R15AO75807 674 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms