RNA–Protein interactions for RNA: ENST00000558859.5

CPNE6-209, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-209ENST00000558859 MBD5Q9P267 1494 aa23.63■■□□□ 1.37
CPNE6-209ENST00000558859 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
CPNE6-209ENST00000558859 TNRQ92752 1358 aa23.62■■□□□ 1.37
CPNE6-209ENST00000558859 MED14O60244 1454 aa23.62■■□□□ 1.37
CPNE6-209ENST00000558859 PZPP20742 1482 aa23.62■■□□□ 1.37
CPNE6-209ENST00000558859 FAM135AQ9P2D6 1515 aa23.61■■□□□ 1.37
CPNE6-209ENST00000558859 DHX29Q7Z478 1369 aaKnown RBP23.61■■□□□ 1.37
CPNE6-209ENST00000558859 CCNB3Q8WWL7 1395 aa23.61■■□□□ 1.37
CPNE6-209ENST00000558859 FBXO31Q5XUX0 539 aaPredicted RBP23.6■■□□□ 1.37
CPNE6-209ENST00000558859 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
CPNE6-209ENST00000558859 ANKLE2Q86XL3 938 aa23.57■■□□□ 1.36
CPNE6-209ENST00000558859 ZNF644Q9H582 1327 aaPredicted RBP23.56■■□□□ 1.36
CPNE6-209ENST00000558859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.55■■□□□ 1.36
CPNE6-209ENST00000558859 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
CPNE6-209ENST00000558859 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
CPNE6-209ENST00000558859 NPHP4O75161 1426 aaPredicted RBP23.54■■□□□ 1.36
CPNE6-209ENST00000558859 NLRP1Q9C000 1473 aa23.54■■□□□ 1.36
CPNE6-209ENST00000558859 TIAM1Q13009 1591 aa23.53■■□□□ 1.36
CPNE6-209ENST00000558859 MIA2Q96PC5 1412 aa23.53■■□□□ 1.36
CPNE6-209ENST00000558859 THEMISQ8N1K5 641 aaPredicted RBP23.53■■□□□ 1.36
CPNE6-209ENST00000558859 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
CPNE6-209ENST00000558859 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
CPNE6-209ENST00000558859 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
CPNE6-209ENST00000558859 LRRC7Q96NW7 1537 aa23.49■■□□□ 1.35
CPNE6-209ENST00000558859 KIF3BO15066 747 aa23.49■■□□□ 1.35
CPNE6-209ENST00000558859 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
CPNE6-209ENST00000558859 MTUS2Q5JR59 1369 aa23.48■■□□□ 1.35
CPNE6-209ENST00000558859 SYNMO15061 1565 aa23.46■■□□□ 1.35
CPNE6-209ENST00000558859 RNF17Q9BXT8 1623 aaKnown RBP23.46■■□□□ 1.35
CPNE6-209ENST00000558859 RGS17Q9UGC6 210 aaPredicted RBP23.46■■□□□ 1.35
CPNE6-209ENST00000558859 WASHC2CQ9Y4E1 1318 aa23.45■■□□□ 1.34
CPNE6-209ENST00000558859 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
CPNE6-209ENST00000558859 CCDC141Q6ZP82 1450 aa23.42■■□□□ 1.34
CPNE6-209ENST00000558859 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
CPNE6-209ENST00000558859 EHBP1L1Q8N3D4 1523 aa23.41■■□□□ 1.34
CPNE6-209ENST00000558859 RSPH4AQ5TD94 716 aa23.4■■□□□ 1.34
CPNE6-209ENST00000558859 XIRP1Q702N8 1843 aaKnown RBP23.36■■□□□ 1.33
CPNE6-209ENST00000558859 ABCC3O15438 1527 aa23.34■■□□□ 1.33
CPNE6-209ENST00000558859 CAMSAP2Q08AD1 1489 aa23.34■■□□□ 1.33
CPNE6-209ENST00000558859 ARHGEF5Q12774 1597 aa23.33■■□□□ 1.33
CPNE6-209ENST00000558859 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
CPNE6-209ENST00000558859 UBR1Q8IWV7 1749 aa23.32■■□□□ 1.32
CPNE6-209ENST00000558859 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
CPNE6-209ENST00000558859 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
CPNE6-209ENST00000558859 NCOA2Q15596 1464 aa23.29■■□□□ 1.32
CPNE6-209ENST00000558859 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
CPNE6-209ENST00000558859 FAM135BQ49AJ0 1406 aa23.28■■□□□ 1.32
CPNE6-209ENST00000558859 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
CPNE6-209ENST00000558859 MROH1Q8NDA8 1641 aa23.27■■□□□ 1.32
CPNE6-209ENST00000558859 SLIT1O75093 1534 aa23.27■■□□□ 1.32
CPNE6-209ENST00000558859 LTKP29376 864 aa23.25■■□□□ 1.31
CPNE6-209ENST00000558859 POTEAQ6S8J7 498 aa23.25■■□□□ 1.31
CPNE6-209ENST00000558859 EIF2AK4Q9P2K8 1649 aaKnown RBP23.25■■□□□ 1.31
CPNE6-209ENST00000558859 MAST1Q9Y2H9 1570 aa23.24■■□□□ 1.31
CPNE6-209ENST00000558859 TSPY4P0CV99 314 aa23.22■■□□□ 1.31
CPNE6-209ENST00000558859 TSPY10P0CW01 314 aa23.22■■□□□ 1.31
CPNE6-209ENST00000558859 CEP152O94986 1710 aa23.19■■□□□ 1.3
CPNE6-209ENST00000558859 TXNDC2Q86VQ3 553 aa23.18■■□□□ 1.3
CPNE6-209ENST00000558859 ARHGAP31Q2M1Z3 1444 aa23.17■■□□□ 1.3
CPNE6-209ENST00000558859 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
CPNE6-209ENST00000558859 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
CPNE6-209ENST00000558859 TMEM94Q12767 1356 aa23.12■■□□□ 1.29
CPNE6-209ENST00000558859 TMEM2Q9UHN6 1383 aa23.11■■□□□ 1.29
CPNE6-209ENST00000558859 KDM5AP29375 1690 aaKnown RBP23.1■■□□□ 1.29
CPNE6-209ENST00000558859 TET3O43151 1660 aa23.09■■□□□ 1.29
CPNE6-209ENST00000558859 PRDM15P57071 1507 aaPredicted RBP23.09■■□□□ 1.29
CPNE6-209ENST00000558859 PIK3C2BO00750 1634 aa23.09■■□□□ 1.29
CPNE6-209ENST00000558859 KCNA6P17658 529 aa23.09■■□□□ 1.29
CPNE6-209ENST00000558859 EID1Q9Y6B2 187 aa23.09■■□□□ 1.29
CPNE6-209ENST00000558859 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
CPNE6-209ENST00000558859 SETD1AO15047 1707 aaKnown RBP23.08■■□□□ 1.28
CPNE6-209ENST00000558859 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
CPNE6-209ENST00000558859 NWD1Q149M9 1564 aa23.03■■□□□ 1.28
CPNE6-209ENST00000558859 NKTRP30414 1462 aaKnown RBP23.01■■□□□ 1.27
CPNE6-209ENST00000558859 EFCAB6Q5THR3 1501 aa23.01■■□□□ 1.27
CPNE6-209ENST00000558859 ERBINQ96RT1 1412 aa22.99■■□□□ 1.27
CPNE6-209ENST00000558859 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
CPNE6-209ENST00000558859 JCADQ9P266 1359 aa22.99■■□□□ 1.27
CPNE6-209ENST00000558859 PHLPP1O60346 1717 aa22.99■■□□□ 1.27
CPNE6-209ENST00000558859 MYOM3Q5VTT5 1437 aa22.99■■□□□ 1.27
CPNE6-209ENST00000558859 IDI1Q13907 227 aa22.98■■□□□ 1.27
CPNE6-209ENST00000558859 RBM33Q96EV2 1170 aaKnown RBP22.96■■□□□ 1.27
CPNE6-209ENST00000558859 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
CPNE6-209ENST00000558859 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
CPNE6-209ENST00000558859 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
CPNE6-209ENST00000558859 LMTK2Q8IWU2 1503 aa22.96■■□□□ 1.27
CPNE6-209ENST00000558859 COL16A1Q07092 1604 aaPredicted RBP22.95■■□□□ 1.26
CPNE6-209ENST00000558859 MSH6P52701 1360 aa22.93■■□□□ 1.26
CPNE6-209ENST00000558859 UPF1Q92900 1129 aaKnown RBP eCLIP22.93■■□□□ 1.26
CPNE6-209ENST00000558859 NOS1P29475 1434 aa22.92■■□□□ 1.26
CPNE6-209ENST00000558859 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
CPNE6-209ENST00000558859 CROCC2H7BZ55 1655 aa22.92■■□□□ 1.26
CPNE6-209ENST00000558859 STAG3Q9UJ98 1225 aa22.91■■□□□ 1.26
CPNE6-209ENST00000558859 ABCC5O15440 1437 aa22.91■■□□□ 1.26
CPNE6-209ENST00000558859 LRP6O75581 1613 aa22.9■■□□□ 1.26
CPNE6-209ENST00000558859 FGD6Q6ZV73 1430 aa22.9■■□□□ 1.26
CPNE6-209ENST00000558859 ADGRB3O60242 1522 aa22.89■■□□□ 1.26
CPNE6-209ENST00000558859 KANK4Q5T7N3 995 aaPredicted RBP22.88■■□□□ 1.25
CPNE6-209ENST00000558859 SPATA31A6Q5VVP1 1343 aa22.87■■□□□ 1.25
CPNE6-209ENST00000558859 NCOA3Q9Y6Q9 1424 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms