RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 ZNF335Q9H4Z2 1342 aaPredicted RBP16.99■□□□□ 0.31
CTDSPL2-203ENST00000558791 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
CTDSPL2-203ENST00000558791 DHX29Q7Z478 1369 aaKnown RBP16.99■□□□□ 0.31
CTDSPL2-203ENST00000558791 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
CTDSPL2-203ENST00000558791 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
CTDSPL2-203ENST00000558791 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.31
CTDSPL2-203ENST00000558791 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
CTDSPL2-203ENST00000558791 ZNF644Q9H582 1327 aaPredicted RBP16.94■□□□□ 0.3
CTDSPL2-203ENST00000558791 PZPP20742 1482 aa16.93■□□□□ 0.3
CTDSPL2-203ENST00000558791 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
CTDSPL2-203ENST00000558791 CPS1P31327 1500 aa16.92■□□□□ 0.3
CTDSPL2-203ENST00000558791 KDM5DQ9BY66 1539 aa16.92■□□□□ 0.3
CTDSPL2-203ENST00000558791 TNRQ92752 1358 aa16.91■□□□□ 0.3
CTDSPL2-203ENST00000558791 KIF3BO15066 747 aa16.9■□□□□ 0.3
CTDSPL2-203ENST00000558791 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
CTDSPL2-203ENST00000558791 TOM1O60784 492 aa16.89■□□□□ 0.29
CTDSPL2-203ENST00000558791 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
CTDSPL2-203ENST00000558791 ANKLE2Q86XL3 938 aa16.88■□□□□ 0.29
CTDSPL2-203ENST00000558791 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
CTDSPL2-203ENST00000558791 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
CTDSPL2-203ENST00000558791 ARHGEF5Q12774 1597 aa16.87■□□□□ 0.29
CTDSPL2-203ENST00000558791 TSPY4P0CV99 314 aa16.87■□□□□ 0.29
CTDSPL2-203ENST00000558791 TSPY10P0CW01 314 aa16.87■□□□□ 0.29
CTDSPL2-203ENST00000558791 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
CTDSPL2-203ENST00000558791 NCOA2Q15596 1464 aa16.86■□□□□ 0.29
CTDSPL2-203ENST00000558791 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
CTDSPL2-203ENST00000558791 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
CTDSPL2-203ENST00000558791 DEPDC5O75140 1603 aa16.86■□□□□ 0.29
CTDSPL2-203ENST00000558791 FBXO31Q5XUX0 539 aaPredicted RBP16.85■□□□□ 0.29
CTDSPL2-203ENST00000558791 MED14O60244 1454 aa16.85■□□□□ 0.29
CTDSPL2-203ENST00000558791 UGGT1Q9NYU2 1555 aa16.84■□□□□ 0.29
CTDSPL2-203ENST00000558791 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
CTDSPL2-203ENST00000558791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTDSPL2-203ENST00000558791 RNF17Q9BXT8 1623 aaKnown RBP16.81■□□□□ 0.28
CTDSPL2-203ENST00000558791 EIF2AK4Q9P2K8 1649 aaKnown RBP16.8■□□□□ 0.28
CTDSPL2-203ENST00000558791 VWDEQ8N2E2 1590 aa16.8■□□□□ 0.28
CTDSPL2-203ENST00000558791 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
CTDSPL2-203ENST00000558791 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL2-203ENST00000558791 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
CTDSPL2-203ENST00000558791 HSPA1LP34931 641 aa16.78■□□□□ 0.28
CTDSPL2-203ENST00000558791 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
CTDSPL2-203ENST00000558791 PIP4K2BP78356 416 aa16.77■□□□□ 0.28
CTDSPL2-203ENST00000558791 MED1Q15648 1581 aaPredicted RBP16.77■□□□□ 0.27
CTDSPL2-203ENST00000558791 ABCC3O15438 1527 aa16.75■□□□□ 0.27
CTDSPL2-203ENST00000558791 LRRC9Q6ZRR7 1453 aa16.74■□□□□ 0.27
CTDSPL2-203ENST00000558791 SYNMO15061 1565 aa16.73■□□□□ 0.27
CTDSPL2-203ENST00000558791 MAP3K1Q13233 1512 aa16.73■□□□□ 0.27
CTDSPL2-203ENST00000558791 ERVK-7P63135 1459 aa16.72■□□□□ 0.27
CTDSPL2-203ENST00000558791 VPS8Q8N3P4 1428 aa16.71■□□□□ 0.27
CTDSPL2-203ENST00000558791 CFAP65Q6ZU64 1925 aaKnown RBP16.71■□□□□ 0.27
CTDSPL2-203ENST00000558791 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
CTDSPL2-203ENST00000558791 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
CTDSPL2-203ENST00000558791 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
CTDSPL2-203ENST00000558791 MROH1Q8NDA8 1641 aa16.69■□□□□ 0.26
CTDSPL2-203ENST00000558791 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
CTDSPL2-203ENST00000558791 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
CTDSPL2-203ENST00000558791 ARHGAP31Q2M1Z3 1444 aa16.69■□□□□ 0.26
CTDSPL2-203ENST00000558791 STRCP1A6NGW2 1772 aa16.69■□□□□ 0.26
CTDSPL2-203ENST00000558791 CEP152O94986 1710 aa16.68■□□□□ 0.26
CTDSPL2-203ENST00000558791 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
CTDSPL2-203ENST00000558791 SLIT1O75093 1534 aa16.66■□□□□ 0.26
CTDSPL2-203ENST00000558791 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
CTDSPL2-203ENST00000558791 PRDM15P57071 1507 aaPredicted RBP16.65■□□□□ 0.26
CTDSPL2-203ENST00000558791 ERBINQ96RT1 1412 aa16.64■□□□□ 0.25
CTDSPL2-203ENST00000558791 EID1Q9Y6B2 187 aa16.63■□□□□ 0.25
CTDSPL2-203ENST00000558791 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
CTDSPL2-203ENST00000558791 TXNDC2Q86VQ3 553 aa16.62■□□□□ 0.25
CTDSPL2-203ENST00000558791 CROCC2H7BZ55 1655 aa16.61■□□□□ 0.25
CTDSPL2-203ENST00000558791 KIF15Q9NS87 1388 aa16.61■□□□□ 0.25
CTDSPL2-203ENST00000558791 KANK1Q14678 1352 aa16.6■□□□□ 0.25
CTDSPL2-203ENST00000558791 LTKP29376 864 aa16.59■□□□□ 0.25
CTDSPL2-203ENST00000558791 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
CTDSPL2-203ENST00000558791 XIRP1Q702N8 1843 aaKnown RBP16.58■□□□□ 0.24
CTDSPL2-203ENST00000558791 TMEM2Q9UHN6 1383 aa16.57■□□□□ 0.24
CTDSPL2-203ENST00000558791 PIK3C2BO00750 1634 aa16.56■□□□□ 0.24
CTDSPL2-203ENST00000558791 PTPN23Q9H3S7 1636 aa16.56■□□□□ 0.24
CTDSPL2-203ENST00000558791 ABCC5O15440 1437 aa16.56■□□□□ 0.24
CTDSPL2-203ENST00000558791 LMTK2Q8IWU2 1503 aa16.55■□□□□ 0.24
CTDSPL2-203ENST00000558791 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
CTDSPL2-203ENST00000558791 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
CTDSPL2-203ENST00000558791 APLP2Q06481 763 aa16.54■□□□□ 0.24
CTDSPL2-203ENST00000558791 RRP7BPQ9NSQ0 103 aa16.54■□□□□ 0.24
CTDSPL2-203ENST00000558791 EFCAB6Q5THR3 1501 aa16.54■□□□□ 0.24
CTDSPL2-203ENST00000558791 DAPK1P53355 1430 aa16.53■□□□□ 0.24
CTDSPL2-203ENST00000558791 ANKRD30AQ9BXX3 1397 aa16.52■□□□□ 0.24
CTDSPL2-203ENST00000558791 KCNA6P17658 529 aa16.52■□□□□ 0.24
CTDSPL2-203ENST00000558791 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
CTDSPL2-203ENST00000558791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.239e-8■□□□□ 9.4
CTDSPL2-203ENST00000558791 IDI1Q13907 227 aa16.5■□□□□ 0.23
CTDSPL2-203ENST00000558791 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
CTDSPL2-203ENST00000558791 TET3O43151 1660 aa16.5■□□□□ 0.23
CTDSPL2-203ENST00000558791 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
CTDSPL2-203ENST00000558791 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
CTDSPL2-203ENST00000558791 NOS1P29475 1434 aa16.48■□□□□ 0.23
CTDSPL2-203ENST00000558791 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
CTDSPL2-203ENST00000558791 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
CTDSPL2-203ENST00000558791 ADGRB3O60242 1522 aa16.46■□□□□ 0.23
CTDSPL2-203ENST00000558791 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
CTDSPL2-203ENST00000558791 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
CTDSPL2-203ENST00000558791 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms