RNA–Protein interactions for RNA: ENST00000558605.1

IDH3A-209, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-209ENST00000558605 KIF3BO15066 747 aa32.29■■■□□ 2.76
IDH3A-209ENST00000558605 NEURL4Q96JN8 1562 aa32.28■■■□□ 2.76
IDH3A-209ENST00000558605 SCAF1Q9H7N4 1312 aaKnown RBP32.26■■■□□ 2.76
IDH3A-209ENST00000558605 CEP162Q5TB80 1403 aa32.26■■■□□ 2.76
IDH3A-209ENST00000558605 POLR1AO95602 1720 aaPredicted RBP32.26■■■□□ 2.75
IDH3A-209ENST00000558605 HSPA1LP34931 641 aa32.25■■■□□ 2.75
IDH3A-209ENST00000558605 PIP4K2BP78356 416 aa32.25■■■□□ 2.75
IDH3A-209ENST00000558605 PZPP20742 1482 aa32.24■■■□□ 2.75
IDH3A-209ENST00000558605 SHANK2Q9UPX8 1470 aa32.23■■■□□ 2.75
IDH3A-209ENST00000558605 CPS1P31327 1500 aa32.23■■■□□ 2.75
IDH3A-209ENST00000558605 KDM5DQ9BY66 1539 aa32.23■■■□□ 2.75
IDH3A-209ENST00000558605 TOM1O60784 492 aa32.22■■■□□ 2.75
IDH3A-209ENST00000558605 CCDC141Q6ZP82 1450 aa32.21■■■□□ 2.75
IDH3A-209ENST00000558605 WASHC2CQ9Y4E1 1318 aa32.21■■■□□ 2.75
IDH3A-209ENST00000558605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.19■■■□□ 2.74
IDH3A-209ENST00000558605 FAM135AQ9P2D6 1515 aa32.18■■■□□ 2.74
IDH3A-209ENST00000558605 ANKLE2Q86XL3 938 aa32.18■■■□□ 2.74
IDH3A-209ENST00000558605 CAMSAP2Q08AD1 1489 aa32.16■■■□□ 2.74
IDH3A-209ENST00000558605 MIA2Q96PC5 1412 aa32.16■■■□□ 2.74
IDH3A-209ENST00000558605 MED1Q15648 1581 aaPredicted RBP32.15■■■□□ 2.74
IDH3A-209ENST00000558605 THEMISQ8N1K5 641 aaPredicted RBP32.15■■■□□ 2.74
IDH3A-209ENST00000558605 RSPH4AQ5TD94 716 aa32.14■■■□□ 2.74
IDH3A-209ENST00000558605 VWDEQ8N2E2 1590 aa32.14■■■□□ 2.74
IDH3A-209ENST00000558605 NCOA2Q15596 1464 aa32.13■■■□□ 2.73
IDH3A-209ENST00000558605 NLRP1Q9C000 1473 aa32.12■■■□□ 2.73
IDH3A-209ENST00000558605 UGGT1Q9NYU2 1555 aa32.11■■■□□ 2.73
IDH3A-209ENST00000558605 NPHP4O75161 1426 aaPredicted RBP32.1■■■□□ 2.73
IDH3A-209ENST00000558605 MED14O60244 1454 aa32.09■■■□□ 2.73
IDH3A-209ENST00000558605 DEPDC5O75140 1603 aa32.07■■■□□ 2.72
IDH3A-209ENST00000558605 ALKQ9UM73 1620 aa32.05■■■□□ 2.72
IDH3A-209ENST00000558605 ARHGEF5Q12774 1597 aa32.04■■■□□ 2.72
IDH3A-209ENST00000558605 TSPY4P0CV99 314 aa32.04■■■□□ 2.72
IDH3A-209ENST00000558605 TSPY10P0CW01 314 aa32.04■■■□□ 2.72
IDH3A-209ENST00000558605 IQGAP1P46940 1657 aa31.99■■■□□ 2.71
IDH3A-209ENST00000558605 ABCC3O15438 1527 aa31.97■■■□□ 2.71
IDH3A-209ENST00000558605 RNF17Q9BXT8 1623 aaKnown RBP31.96■■■□□ 2.71
IDH3A-209ENST00000558605 STRCP1A6NGW2 1772 aa31.95■■■□□ 2.71
IDH3A-209ENST00000558605 LRRC7Q96NW7 1537 aa31.94■■■□□ 2.7
IDH3A-209ENST00000558605 PHF23Q9BUL5 403 aaPredicted RBP31.92■■■□□ 2.7
IDH3A-209ENST00000558605 ERVK-7P63135 1459 aa31.91■■■□□ 2.7
IDH3A-209ENST00000558605 SENP3Q9H4L4 574 aaPredicted RBP31.91■■■□□ 2.7
IDH3A-209ENST00000558605 ZC3H13Q5T200 1668 aaKnown RBP31.91■■■□□ 2.7
IDH3A-209ENST00000558605 MAST1Q9Y2H9 1570 aa31.9■■■□□ 2.7
IDH3A-209ENST00000558605 MROH1Q8NDA8 1641 aa31.86■■■□□ 2.69
IDH3A-209ENST00000558605 EIF2AK4Q9P2K8 1649 aaKnown RBP31.86■■■□□ 2.69
IDH3A-209ENST00000558605 SYNMO15061 1565 aa31.85■■■□□ 2.69
IDH3A-209ENST00000558605 LRRC9Q6ZRR7 1453 aa31.84■■■□□ 2.69
IDH3A-209ENST00000558605 UBR1Q8IWV7 1749 aa31.82■■■□□ 2.68
IDH3A-209ENST00000558605 CEP152O94986 1710 aa31.8■■■□□ 2.68
IDH3A-209ENST00000558605 SCAF11Q99590 1463 aaKnown RBP31.79■■■□□ 2.68
IDH3A-209ENST00000558605 LTKP29376 864 aa31.78■■■□□ 2.68
IDH3A-209ENST00000558605 CFAP65Q6ZU64 1925 aaKnown RBP31.77■■■□□ 2.68
IDH3A-209ENST00000558605 KANK4Q5T7N3 995 aaPredicted RBP31.75■■■□□ 2.67
IDH3A-209ENST00000558605 TXNDC2Q86VQ3 553 aa31.75■■■□□ 2.67
IDH3A-209ENST00000558605 ARHGAP23Q9P227 1491 aa31.75■■■□□ 2.67
IDH3A-209ENST00000558605 VPS8Q8N3P4 1428 aa31.74■■■□□ 2.67
IDH3A-209ENST00000558605 SLIT1O75093 1534 aa31.73■■■□□ 2.67
IDH3A-209ENST00000558605 DUOX2Q9NRD8 1548 aa31.73■■■□□ 2.67
IDH3A-209ENST00000558605 MYOM3Q5VTT5 1437 aa31.71■■■□□ 2.67
IDH3A-209ENST00000558605 ARHGAP31Q2M1Z3 1444 aa31.69■■■□□ 2.66
IDH3A-209ENST00000558605 RGS17Q9UGC6 210 aaPredicted RBP31.68■■■□□ 2.66
IDH3A-209ENST00000558605 XIRP1Q702N8 1843 aaKnown RBP31.67■■■□□ 2.66
IDH3A-209ENST00000558605 EID1Q9Y6B2 187 aa31.66■■■□□ 2.66
IDH3A-209ENST00000558605 PRDM15P57071 1507 aaPredicted RBP31.65■■■□□ 2.66
IDH3A-209ENST00000558605 KIF15Q9NS87 1388 aa31.65■■■□□ 2.66
IDH3A-209ENST00000558605 MAP3K1Q13233 1512 aa31.64■■■□□ 2.66
IDH3A-209ENST00000558605 RRP7BPQ9NSQ0 103 aa31.63■■■□□ 2.65
IDH3A-209ENST00000558605 PIK3C2BO00750 1634 aa31.61■■■□□ 2.65
IDH3A-209ENST00000558605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.61■■■□□ 2.65
IDH3A-209ENST00000558605 ERBINQ96RT1 1412 aa31.6■■■□□ 2.65
IDH3A-209ENST00000558605 TMEM2Q9UHN6 1383 aa31.6■■■□□ 2.65
IDH3A-209ENST00000558605 ABCC5O15440 1437 aa31.59■■■□□ 2.65
IDH3A-209ENST00000558605 FAM135BQ49AJ0 1406 aa31.58■■■□□ 2.65
IDH3A-209ENST00000558605 LOC105371045A0A1W2PR82 267 aa31.57■■■□□ 2.64
IDH3A-209ENST00000558605 STAG3Q9UJ98 1225 aa31.56■■■□□ 2.64
IDH3A-209ENST00000558605 CROCC2H7BZ55 1655 aa31.55■■■□□ 2.64
IDH3A-209ENST00000558605 TMEM94Q12767 1356 aa31.54■■■□□ 2.64
IDH3A-209ENST00000558605 IDI1Q13907 227 aa31.52■■■□□ 2.64
IDH3A-209ENST00000558605 KCNA6P17658 529 aa31.51■■■□□ 2.63
IDH3A-209ENST00000558605 KANK1Q14678 1352 aa31.51■■■□□ 2.63
IDH3A-209ENST00000558605 EFCAB6Q5THR3 1501 aa31.5■■■□□ 2.63
IDH3A-209ENST00000558605 SLC26A8Q96RN1 970 aa31.49■■■□□ 2.63
IDH3A-209ENST00000558605 PTPN23Q9H3S7 1636 aa31.49■■■□□ 2.63
IDH3A-209ENST00000558605 RBM33Q96EV2 1170 aaKnown RBP31.48■■■□□ 2.63
IDH3A-209ENST00000558605 DAPK1P53355 1430 aa31.48■■■□□ 2.63
IDH3A-209ENST00000558605 TET3O43151 1660 aa31.48■■■□□ 2.63
IDH3A-209ENST00000558605 KDM5AP29375 1690 aaKnown RBP31.48■■■□□ 2.63
IDH3A-209ENST00000558605 POTEAQ6S8J7 498 aa31.47■■■□□ 2.63
IDH3A-209ENST00000558605 PROSER2Q86WR7 435 aaPredicted RBP31.47■■■□□ 2.63
IDH3A-209ENST00000558605 LMTK2Q8IWU2 1503 aa31.46■■■□□ 2.63
IDH3A-209ENST00000558605 ROBO1Q9Y6N7 1651 aa31.44■■■□□ 2.62
IDH3A-209ENST00000558605 CHIC2Q9UKJ5 165 aa31.42■■■□□ 2.62
IDH3A-209ENST00000558605 NOS1P29475 1434 aa31.4■■■□□ 2.62
IDH3A-209ENST00000558605 ANKRD30AQ9BXX3 1397 aa31.39■■■□□ 2.62
IDH3A-209ENST00000558605 FGD6Q6ZV73 1430 aa31.37■■■□□ 2.61
IDH3A-209ENST00000558605 ADGRB3O60242 1522 aa31.37■■■□□ 2.61
IDH3A-209ENST00000558605 NWD1Q149M9 1564 aa31.35■■■□□ 2.61
IDH3A-209ENST00000558605 NKTRP30414 1462 aaKnown RBP31.35■■■□□ 2.61
IDH3A-209ENST00000558605 BCANQ96GW7 911 aa31.33■■■□□ 2.61
IDH3A-209ENST00000558605 SLC52A1Q9NWF4 448 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms