RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 KDM5DQ9BY66 1539 aa15.85■□□□□ 0.13
TPM1-212ENST00000558347 DNMT1P26358 1616 aaKnown RBP15.84■□□□□ 0.13
TPM1-212ENST00000558347 MYO3AQ8NEV4 1616 aa15.84■□□□□ 0.13
TPM1-212ENST00000558347 SHANK2Q9UPX8 1470 aa15.83■□□□□ 0.13
TPM1-212ENST00000558347 RNF17Q9BXT8 1623 aaKnown RBP15.83■□□□□ 0.12
TPM1-212ENST00000558347 EIF2AK4Q9P2K8 1649 aaKnown RBP15.83■□□□□ 0.12
TPM1-212ENST00000558347 DAPK1P53355 1430 aa15.83■□□□□ 0.12
TPM1-212ENST00000558347 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.12
TPM1-212ENST00000558347 ZNF142P52746 1687 aaPredicted RBP15.81■□□□□ 0.12
TPM1-212ENST00000558347 WASHC2CQ9Y4E1 1318 aa15.81■□□□□ 0.12
TPM1-212ENST00000558347 DUOX2Q9NRD8 1548 aa15.8■□□□□ 0.12
TPM1-212ENST00000558347 MROH1Q8NDA8 1641 aa15.8■□□□□ 0.12
TPM1-212ENST00000558347 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
TPM1-212ENST00000558347 PZPP20742 1482 aa15.79■□□□□ 0.12
TPM1-212ENST00000558347 CEP170BQ9Y4F5 1589 aaPredicted RBP15.79■□□□□ 0.12
TPM1-212ENST00000558347 CAMSAP1Q5T5Y3 1602 aa15.79■□□□□ 0.12
TPM1-212ENST00000558347 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
TPM1-212ENST00000558347 FBXO31Q5XUX0 539 aaPredicted RBP15.78■□□□□ 0.12
TPM1-212ENST00000558347 NCOA1Q15788 1441 aa15.78■□□□□ 0.12
TPM1-212ENST00000558347 ABCC3O15438 1527 aa15.78■□□□□ 0.12
TPM1-212ENST00000558347 ZC3H13Q5T200 1668 aaKnown RBP15.77■□□□□ 0.12
TPM1-212ENST00000558347 RRP7BPQ9NSQ0 103 aa15.77■□□□□ 0.11
TPM1-212ENST00000558347 CHIC2Q9UKJ5 165 aa15.76■□□□□ 0.11
TPM1-212ENST00000558347 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
TPM1-212ENST00000558347 CEP152O94986 1710 aa15.76■□□□□ 0.11
TPM1-212ENST00000558347 PTPRTO14522 1441 aa15.75■□□□□ 0.11
TPM1-212ENST00000558347 ERBINQ96RT1 1412 aa15.75■□□□□ 0.11
TPM1-212ENST00000558347 TNRQ92752 1358 aa15.75■□□□□ 0.11
TPM1-212ENST00000558347 A2ML1A8K2U0 1454 aa15.74■□□□□ 0.11
TPM1-212ENST00000558347 FAM50AQ14320 339 aaKnown RBP15.73■□□□□ 0.11
TPM1-212ENST00000558347 PRDM15P57071 1507 aaPredicted RBP15.73■□□□□ 0.11
TPM1-212ENST00000558347 FBXO41Q8TF61 875 aa15.73■□□□□ 0.11
TPM1-212ENST00000558347 PLA2R1Q13018 1463 aa15.73■□□□□ 0.11
TPM1-212ENST00000558347 ANKRD30AQ9BXX3 1397 aa15.72■□□□□ 0.11
TPM1-212ENST00000558347 ADGRL2O95490 1459 aa15.72■□□□□ 0.11
TPM1-212ENST00000558347 DEPDC5O75140 1603 aa15.72■□□□□ 0.11
TPM1-212ENST00000558347 NCKAP5LQ9HCH0 1330 aa15.71■□□□□ 0.11
TPM1-212ENST00000558347 SPATA31D1Q6ZQQ2 1576 aa15.7■□□□□ 0.1
TPM1-212ENST00000558347 PPARGC1BQ86YN6 1023 aaKnown RBP15.7■□□□□ 0.1
TPM1-212ENST00000558347 CERKQ8TCT0 537 aa15.7■□□□□ 0.1
TPM1-212ENST00000558347 ERVK-7P63135 1459 aa15.68■□□□□ 0.1
TPM1-212ENST00000558347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.19e-7■■■□□ 19
TPM1-212ENST00000558347 NLRP1Q9C000 1473 aa15.68■□□□□ 0.1
TPM1-212ENST00000558347 CFAP65Q6ZU64 1925 aaKnown RBP15.67■□□□□ 0.1
TPM1-212ENST00000558347 PKD2Q13563 968 aa15.67■□□□□ 0.1
TPM1-212ENST00000558347 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
TPM1-212ENST00000558347 UGGT1Q9NYU2 1555 aa15.65■□□□□ 0.1
TPM1-212ENST00000558347 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
TPM1-212ENST00000558347 ARHGAP31Q2M1Z3 1444 aa15.65■□□□□ 0.1
TPM1-212ENST00000558347 POLR1AO95602 1720 aaPredicted RBP15.65■□□□□ 0.1
TPM1-212ENST00000558347 NEURL4Q96JN8 1562 aa15.64■□□□□ 0.09
TPM1-212ENST00000558347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.64■□□□□ 0.091e-7■■□□□ 13.6
TPM1-212ENST00000558347 LMTK2Q8IWU2 1503 aa15.63■□□□□ 0.09
TPM1-212ENST00000558347 KANK1Q14678 1352 aa15.63■□□□□ 0.09
TPM1-212ENST00000558347 ANKRD50Q9ULJ7 1429 aa15.63■□□□□ 0.09
TPM1-212ENST00000558347 THEMISQ8N1K5 641 aaPredicted RBP15.61■□□□□ 0.09
TPM1-212ENST00000558347 ZNF335Q9H4Z2 1342 aaPredicted RBP15.61■□□□□ 0.09
TPM1-212ENST00000558347 UBR1Q8IWV7 1749 aa15.6■□□□□ 0.09
TPM1-212ENST00000558347 EFCAB6Q5THR3 1501 aa15.59■□□□□ 0.09
TPM1-212ENST00000558347 ROCK1Q13464 1354 aa15.58■□□□□ 0.09
TPM1-212ENST00000558347 ITGAEP38570 1179 aa15.58■□□□□ 0.08
TPM1-212ENST00000558347 ANKLE2Q86XL3 938 aa15.58■□□□□ 0.08
TPM1-212ENST00000558347 PIK3C2BO00750 1634 aa15.56■□□□□ 0.08
TPM1-212ENST00000558347 UNC13BO14795 1591 aa15.56■□□□□ 0.08
TPM1-212ENST00000558347 SYNMO15061 1565 aa15.56■□□□□ 0.08
TPM1-212ENST00000558347 MED14O60244 1454 aa15.56■□□□□ 0.08
TPM1-212ENST00000558347 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
TPM1-212ENST00000558347 NPHP4O75161 1426 aaPredicted RBP15.54■□□□□ 0.08
TPM1-212ENST00000558347 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
TPM1-212ENST00000558347 IQSEC2Q5JU85 1478 aa15.54■□□□□ 0.08
TPM1-212ENST00000558347 NOS1P29475 1434 aa15.54■□□□□ 0.08
TPM1-212ENST00000558347 TET3O43151 1660 aa15.53■□□□□ 0.08
TPM1-212ENST00000558347 IQGAP1P46940 1657 aa15.53■□□□□ 0.08
TPM1-212ENST00000558347 ARHGAP23Q9P227 1491 aa15.52■□□□□ 0.08
TPM1-212ENST00000558347 SLIT1O75093 1534 aa15.52■□□□□ 0.07
TPM1-212ENST00000558347 GCC2Q8IWJ2 1684 aa15.52■□□□□ 0.07
TPM1-212ENST00000558347 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
TPM1-212ENST00000558347 IDI1Q13907 227 aa15.51■□□□□ 0.07
TPM1-212ENST00000558347 KDM5AP29375 1690 aaKnown RBP15.5■□□□□ 0.07
TPM1-212ENST00000558347 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
TPM1-212ENST00000558347 SCAF11Q99590 1463 aaKnown RBP15.49■□□□□ 0.07
TPM1-212ENST00000558347 LTKP29376 864 aa15.49■□□□□ 0.07
TPM1-212ENST00000558347 E9PCH4 1651 aa15.48■□□□□ 0.07
TPM1-212ENST00000558347 TMEM2Q9UHN6 1383 aa15.47■□□□□ 0.07
TPM1-212ENST00000558347 ADGRB3O60242 1522 aa15.47■□□□□ 0.07
TPM1-212ENST00000558347 CPS1P31327 1500 aa15.47■□□□□ 0.07
TPM1-212ENST00000558347 TXNDC2Q86VQ3 553 aa15.47■□□□□ 0.07
TPM1-212ENST00000558347 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
TPM1-212ENST00000558347 STRCP1A6NGW2 1772 aa15.46■□□□□ 0.07
TPM1-212ENST00000558347 NUP155O75694 1391 aa15.46■□□□□ 0.07
TPM1-212ENST00000558347 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
TPM1-212ENST00000558347 MYO5BQ9ULV0 1848 aa15.44■□□□□ 0.06
TPM1-212ENST00000558347 EID1Q9Y6B2 187 aa15.43■□□□□ 0.06
TPM1-212ENST00000558347 NAIPQ13075 1403 aa15.43■□□□□ 0.06
TPM1-212ENST00000558347 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
TPM1-212ENST00000558347 TMEM131LA2VDJ0 1609 aa15.42■□□□□ 0.06
TPM1-212ENST00000558347 LRRC7Q96NW7 1537 aa15.39■□□□□ 0.05
TPM1-212ENST00000558347 ZFYVE9O95405 1425 aa15.39■□□□□ 0.05
TPM1-212ENST00000558347 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
TPM1-212ENST00000558347 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms