RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 LRRIQ1Q96JM4 1722 aa16.93■□□□□ 0.3
LYSMD2-203ENST00000558126 SOCS7O14512 581 aa16.93■□□□□ 0.3
LYSMD2-203ENST00000558126 ITSN2Q9NZM3 1697 aa16.93■□□□□ 0.3
LYSMD2-203ENST00000558126 SAMD9LQ8IVG5 1584 aa16.92■□□□□ 0.3
LYSMD2-203ENST00000558126 PLEKHH2Q8IVE3 1493 aa16.92■□□□□ 0.3
LYSMD2-203ENST00000558126 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
LYSMD2-203ENST00000558126 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
LYSMD2-203ENST00000558126 PKD2Q13563 968 aa16.9■□□□□ 0.3
LYSMD2-203ENST00000558126 PIP4P2Q8N4L2 257 aa16.9■□□□□ 0.3
LYSMD2-203ENST00000558126 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
LYSMD2-203ENST00000558126 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
LYSMD2-203ENST00000558126 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
LYSMD2-203ENST00000558126 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.29
LYSMD2-203ENST00000558126 SPDYE2Q495Y8 402 aa16.89■□□□□ 0.29
LYSMD2-203ENST00000558126 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
LYSMD2-203ENST00000558126 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
LYSMD2-203ENST00000558126 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
LYSMD2-203ENST00000558126 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
LYSMD2-203ENST00000558126 A2MP01023 1474 aa16.86■□□□□ 0.29
LYSMD2-203ENST00000558126 PTPRKQ15262 1439 aa16.86■□□□□ 0.29
LYSMD2-203ENST00000558126 SYCP2Q9BX26 1530 aa16.86■□□□□ 0.29
LYSMD2-203ENST00000558126 CAMSAP1Q5T5Y3 1602 aa16.85■□□□□ 0.29
LYSMD2-203ENST00000558126 CCNB3Q8WWL7 1395 aa16.85■□□□□ 0.29
LYSMD2-203ENST00000558126 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
LYSMD2-203ENST00000558126 NCKAP5LQ9HCH0 1330 aa16.84■□□□□ 0.29
LYSMD2-203ENST00000558126 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
LYSMD2-203ENST00000558126 TCOF1Q13428 1488 aaKnown RBP16.82■□□□□ 0.28
LYSMD2-203ENST00000558126 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
LYSMD2-203ENST00000558126 GGT6Q6P531 493 aa16.81■□□□□ 0.28
LYSMD2-203ENST00000558126 SP7Q8TDD2 431 aaPredicted RBP16.81■□□□□ 0.28
LYSMD2-203ENST00000558126 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
LYSMD2-203ENST00000558126 ZNF335Q9H4Z2 1342 aaPredicted RBP16.8■□□□□ 0.28
LYSMD2-203ENST00000558126 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
LYSMD2-203ENST00000558126 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
LYSMD2-203ENST00000558126 MBD5Q9P267 1494 aa16.79■□□□□ 0.28
LYSMD2-203ENST00000558126 DHX29Q7Z478 1369 aaKnown RBP16.78■□□□□ 0.28
LYSMD2-203ENST00000558126 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
LYSMD2-203ENST00000558126 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.28
LYSMD2-203ENST00000558126 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
LYSMD2-203ENST00000558126 CEP170BQ9Y4F5 1589 aaPredicted RBP16.77■□□□□ 0.27
LYSMD2-203ENST00000558126 ZNF142P52746 1687 aaPredicted RBP16.76■□□□□ 0.27
LYSMD2-203ENST00000558126 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
LYSMD2-203ENST00000558126 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
LYSMD2-203ENST00000558126 ZNF644Q9H582 1327 aaPredicted RBP16.74■□□□□ 0.27
LYSMD2-203ENST00000558126 CEP162Q5TB80 1403 aa16.74■□□□□ 0.27
LYSMD2-203ENST00000558126 MYO3AQ8NEV4 1616 aa16.74■□□□□ 0.27
LYSMD2-203ENST00000558126 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
LYSMD2-203ENST00000558126 FAM135AQ9P2D6 1515 aa16.72■□□□□ 0.27
LYSMD2-203ENST00000558126 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
LYSMD2-203ENST00000558126 ADGBQ8N7X0 1667 aa16.71■□□□□ 0.27
LYSMD2-203ENST00000558126 TNRQ92752 1358 aa16.69■□□□□ 0.26
LYSMD2-203ENST00000558126 SSUH2Q9Y2M2 353 aa16.69■□□□□ 0.26
LYSMD2-203ENST00000558126 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
LYSMD2-203ENST00000558126 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
LYSMD2-203ENST00000558126 DNMT1P26358 1616 aaKnown RBP16.68■□□□□ 0.26
LYSMD2-203ENST00000558126 KIF3BO15066 747 aa16.68■□□□□ 0.26
LYSMD2-203ENST00000558126 TOM1O60784 492 aa16.68■□□□□ 0.26
LYSMD2-203ENST00000558126 PZPP20742 1482 aa16.67■□□□□ 0.26
LYSMD2-203ENST00000558126 CPS1P31327 1500 aa16.67■□□□□ 0.26
LYSMD2-203ENST00000558126 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
LYSMD2-203ENST00000558126 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
LYSMD2-203ENST00000558126 THEMISQ8N1K5 641 aaPredicted RBP16.67■□□□□ 0.26
LYSMD2-203ENST00000558126 WASHC2CQ9Y4E1 1318 aa16.67■□□□□ 0.26
LYSMD2-203ENST00000558126 CCDC141Q6ZP82 1450 aa16.66■□□□□ 0.26
LYSMD2-203ENST00000558126 MIA2Q96PC5 1412 aa16.65■□□□□ 0.26
LYSMD2-203ENST00000558126 HAX1O00165 279 aa16.65■□□□□ 0.26
LYSMD2-203ENST00000558126 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
LYSMD2-203ENST00000558126 NLRP1Q9C000 1473 aa16.64■□□□□ 0.25
LYSMD2-203ENST00000558126 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
LYSMD2-203ENST00000558126 KDM5DQ9BY66 1539 aa16.64■□□□□ 0.25
LYSMD2-203ENST00000558126 TSPY4P0CV99 314 aa16.63■□□□□ 0.25
LYSMD2-203ENST00000558126 TSPY10P0CW01 314 aa16.63■□□□□ 0.25
LYSMD2-203ENST00000558126 MED14O60244 1454 aa16.62■□□□□ 0.25
LYSMD2-203ENST00000558126 HSPA1LP34931 641 aa16.61■□□□□ 0.25
LYSMD2-203ENST00000558126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
LYSMD2-203ENST00000558126 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
LYSMD2-203ENST00000558126 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
LYSMD2-203ENST00000558126 CAMSAP2Q08AD1 1489 aa16.59■□□□□ 0.25
LYSMD2-203ENST00000558126 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
LYSMD2-203ENST00000558126 NPHP4O75161 1426 aaPredicted RBP16.57■□□□□ 0.24
LYSMD2-203ENST00000558126 PIP4K2BP78356 416 aa16.57■□□□□ 0.24
LYSMD2-203ENST00000558126 UGGT1Q9NYU2 1555 aa16.56■□□□□ 0.24
LYSMD2-203ENST00000558126 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
LYSMD2-203ENST00000558126 VWDEQ8N2E2 1590 aa16.55■□□□□ 0.24
LYSMD2-203ENST00000558126 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
LYSMD2-203ENST00000558126 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
LYSMD2-203ENST00000558126 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
LYSMD2-203ENST00000558126 ABCC3O15438 1527 aa16.5■□□□□ 0.23
LYSMD2-203ENST00000558126 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
LYSMD2-203ENST00000558126 MAST1Q9Y2H9 1570 aa16.49■□□□□ 0.23
LYSMD2-203ENST00000558126 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
LYSMD2-203ENST00000558126 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
LYSMD2-203ENST00000558126 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
LYSMD2-203ENST00000558126 LRRC7Q96NW7 1537 aa16.47■□□□□ 0.23
LYSMD2-203ENST00000558126 ARHGAP31Q2M1Z3 1444 aa16.46■□□□□ 0.23
LYSMD2-203ENST00000558126 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
LYSMD2-203ENST00000558126 ZC3H13Q5T200 1668 aaKnown RBP16.46■□□□□ 0.23
LYSMD2-203ENST00000558126 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
LYSMD2-203ENST00000558126 EIF2AK4Q9P2K8 1649 aaKnown RBP16.45■□□□□ 0.22
LYSMD2-203ENST00000558126 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms