RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 ABCC5O15440 1437 aa20.46■□□□□ 0.87
CSHL1-207ENST00000558099 KIF3BO15066 747 aa20.46■□□□□ 0.87
CSHL1-207ENST00000558099 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
CSHL1-207ENST00000558099 NCOA1Q15788 1441 aa20.43■□□□□ 0.86
CSHL1-207ENST00000558099 SHANK2Q9UPX8 1470 aa20.43■□□□□ 0.86
CSHL1-207ENST00000558099 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
CSHL1-207ENST00000558099 PTPN23Q9H3S7 1636 aa20.42■□□□□ 0.86
CSHL1-207ENST00000558099 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
CSHL1-207ENST00000558099 PTPRTO14522 1441 aa20.42■□□□□ 0.86
CSHL1-207ENST00000558099 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
CSHL1-207ENST00000558099 APLP2Q06481 763 aa20.4■□□□□ 0.86
CSHL1-207ENST00000558099 PZPP20742 1482 aa20.4■□□□□ 0.86
CSHL1-207ENST00000558099 ZNF142P52746 1687 aaPredicted RBP20.4■□□□□ 0.86
CSHL1-207ENST00000558099 FBXO41Q8TF61 875 aa20.39■□□□□ 0.85
CSHL1-207ENST00000558099 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.85
CSHL1-207ENST00000558099 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
CSHL1-207ENST00000558099 MYO3AQ8NEV4 1616 aa20.38■□□□□ 0.85
CSHL1-207ENST00000558099 DAPK1P53355 1430 aa20.38■□□□□ 0.85
CSHL1-207ENST00000558099 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
CSHL1-207ENST00000558099 CROCC2H7BZ55 1655 aa20.37■□□□□ 0.85
CSHL1-207ENST00000558099 DNMT1P26358 1616 aaKnown RBP20.37■□□□□ 0.85
CSHL1-207ENST00000558099 DUOX2Q9NRD8 1548 aa20.37■□□□□ 0.85
CSHL1-207ENST00000558099 CEP170BQ9Y4F5 1589 aaPredicted RBP20.36■□□□□ 0.85
CSHL1-207ENST00000558099 PLA2R1Q13018 1463 aa20.36■□□□□ 0.85
CSHL1-207ENST00000558099 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
CSHL1-207ENST00000558099 ABCC3O15438 1527 aa20.35■□□□□ 0.85
CSHL1-207ENST00000558099 CAMSAP1Q5T5Y3 1602 aa20.35■□□□□ 0.85
CSHL1-207ENST00000558099 WASHC2CQ9Y4E1 1318 aa20.35■□□□□ 0.85
CSHL1-207ENST00000558099 A2ML1A8K2U0 1454 aa20.34■□□□□ 0.85
CSHL1-207ENST00000558099 KIF15Q9NS87 1388 aa20.33■□□□□ 0.84
CSHL1-207ENST00000558099 CERKQ8TCT0 537 aa20.33■□□□□ 0.84
CSHL1-207ENST00000558099 ERBINQ96RT1 1412 aa20.32■□□□□ 0.84
CSHL1-207ENST00000558099 TNRQ92752 1358 aa20.31■□□□□ 0.84
CSHL1-207ENST00000558099 LTBP4Q8N2S1 1624 aa20.29■□□□□ 0.84
CSHL1-207ENST00000558099 ADGRL2O95490 1459 aa20.29■□□□□ 0.84
CSHL1-207ENST00000558099 ZC3H13Q5T200 1668 aaKnown RBP20.29■□□□□ 0.84
CSHL1-207ENST00000558099 PRDM15P57071 1507 aaPredicted RBP20.29■□□□□ 0.84
CSHL1-207ENST00000558099 SPATA31D1Q6ZQQ2 1576 aa20.28■□□□□ 0.84
CSHL1-207ENST00000558099 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
CSHL1-207ENST00000558099 PKD2Q13563 968 aa20.27■□□□□ 0.84
CSHL1-207ENST00000558099 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
CSHL1-207ENST00000558099 DEPDC5O75140 1603 aa20.27■□□□□ 0.84
CSHL1-207ENST00000558099 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.83
CSHL1-207ENST00000558099 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
CSHL1-207ENST00000558099 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
CSHL1-207ENST00000558099 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
CSHL1-207ENST00000558099 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
CSHL1-207ENST00000558099 LMTK2Q8IWU2 1503 aa20.22■□□□□ 0.83
CSHL1-207ENST00000558099 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
CSHL1-207ENST00000558099 NEURL4Q96JN8 1562 aa20.2■□□□□ 0.82
CSHL1-207ENST00000558099 CEP152O94986 1710 aa20.19■□□□□ 0.82
CSHL1-207ENST00000558099 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
CSHL1-207ENST00000558099 MED14O60244 1454 aa20.17■□□□□ 0.82
CSHL1-207ENST00000558099 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
CSHL1-207ENST00000558099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.82
CSHL1-207ENST00000558099 THEMISQ8N1K5 641 aaPredicted RBP20.16■□□□□ 0.82
CSHL1-207ENST00000558099 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
CSHL1-207ENST00000558099 ZNF335Q9H4Z2 1342 aaPredicted RBP20.14■□□□□ 0.82
CSHL1-207ENST00000558099 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.82
CSHL1-207ENST00000558099 ROCK1Q13464 1354 aa20.13■□□□□ 0.81
CSHL1-207ENST00000558099 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
CSHL1-207ENST00000558099 NOS1P29475 1434 aa20.11■□□□□ 0.81
CSHL1-207ENST00000558099 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
CSHL1-207ENST00000558099 ARHGAP23Q9P227 1491 aa20.1■□□□□ 0.81
CSHL1-207ENST00000558099 ANKLE2Q86XL3 938 aa20.1■□□□□ 0.81
CSHL1-207ENST00000558099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.81
CSHL1-207ENST00000558099 UBR1Q8IWV7 1749 aa20.09■□□□□ 0.81
CSHL1-207ENST00000558099 KANK1Q14678 1352 aa20.09■□□□□ 0.81
CSHL1-207ENST00000558099 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.81
CSHL1-207ENST00000558099 SLIT1O75093 1534 aa20.07■□□□□ 0.8
CSHL1-207ENST00000558099 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
CSHL1-207ENST00000558099 NPHP4O75161 1426 aaPredicted RBP20.06■□□□□ 0.8
CSHL1-207ENST00000558099 SYNMO15061 1565 aa20.06■□□□□ 0.8
CSHL1-207ENST00000558099 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
CSHL1-207ENST00000558099 UNC13BO14795 1591 aa20.04■□□□□ 0.8
CSHL1-207ENST00000558099 CFAP65Q6ZU64 1925 aaKnown RBP20.04■□□□□ 0.8
CSHL1-207ENST00000558099 IDI1Q13907 227 aa20.04■□□□□ 0.8
CSHL1-207ENST00000558099 LTKP29376 864 aa20.03■□□□□ 0.8
CSHL1-207ENST00000558099 RPRD2Q5VT52 1461 aaKnown RBP20.03■□□□□ 0.8
CSHL1-207ENST00000558099 KDM5AP29375 1690 aaKnown RBP20.02■□□□□ 0.8
CSHL1-207ENST00000558099 PIK3C2BO00750 1634 aa20.01■□□□□ 0.79
CSHL1-207ENST00000558099 SCAF11Q99590 1463 aaKnown RBP20■□□□□ 0.79
CSHL1-207ENST00000558099 TMEM2Q9UHN6 1383 aa20■□□□□ 0.79
CSHL1-207ENST00000558099 CPS1P31327 1500 aa19.99■□□□□ 0.79
CSHL1-207ENST00000558099 IQGAP1P46940 1657 aa19.99■□□□□ 0.79
CSHL1-207ENST00000558099 TET3O43151 1660 aa19.98■□□□□ 0.79
CSHL1-207ENST00000558099 SLC52A1Q9NWF4 448 aa19.96■□□□□ 0.79
CSHL1-207ENST00000558099 IQGAP3Q86VI3 1631 aa19.95■□□□□ 0.78
CSHL1-207ENST00000558099 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
CSHL1-207ENST00000558099 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
CSHL1-207ENST00000558099 GCC2Q8IWJ2 1684 aa19.93■□□□□ 0.78
CSHL1-207ENST00000558099 ADGRB3O60242 1522 aa19.93■□□□□ 0.78
CSHL1-207ENST00000558099 ALKQ9UM73 1620 aa19.92■□□□□ 0.78
CSHL1-207ENST00000558099 E9PCH4 1651 aa19.91■□□□□ 0.78
CSHL1-207ENST00000558099 ZFYVE9O95405 1425 aa19.9■□□□□ 0.78
CSHL1-207ENST00000558099 LRRC7Q96NW7 1537 aa19.9■□□□□ 0.78
CSHL1-207ENST00000558099 NEUROD1Q13562 356 aa19.89■□□□□ 0.77
CSHL1-207ENST00000558099 NAIPQ13075 1403 aa19.89■□□□□ 0.77
CSHL1-207ENST00000558099 NUP155O75694 1391 aa19.88■□□□□ 0.77
CSHL1-207ENST00000558099 ITGAEP38570 1179 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms