RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
LINC00648-204ENST00000557749 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
LINC00648-204ENST00000557749 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
LINC00648-204ENST00000557749 ATP7AQ04656 1500 aa17.92■□□□□ 0.46
LINC00648-204ENST00000557749 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC00648-204ENST00000557749 MLECQ14165 292 aa17.91■□□□□ 0.46
LINC00648-204ENST00000557749 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.46
LINC00648-204ENST00000557749 SIGLEC1Q9BZZ2 1709 aa17.89■□□□□ 0.46
LINC00648-204ENST00000557749 INO80Q9ULG1 1556 aaPredicted RBP17.89■□□□□ 0.45
LINC00648-204ENST00000557749 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
LINC00648-204ENST00000557749 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
LINC00648-204ENST00000557749 CCDC141Q6ZP82 1450 aa17.87■□□□□ 0.45
LINC00648-204ENST00000557749 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
LINC00648-204ENST00000557749 CAMSAP2Q08AD1 1489 aa17.86■□□□□ 0.45
LINC00648-204ENST00000557749 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
LINC00648-204ENST00000557749 A2MP01023 1474 aa17.85■□□□□ 0.45
LINC00648-204ENST00000557749 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
LINC00648-204ENST00000557749 ARHGEF5Q12774 1597 aa17.83■□□□□ 0.45
LINC00648-204ENST00000557749 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
LINC00648-204ENST00000557749 MYOM3Q5VTT5 1437 aa17.82■□□□□ 0.44
LINC00648-204ENST00000557749 TSPY4P0CV99 314 aa17.82■□□□□ 0.44
LINC00648-204ENST00000557749 TSPY10P0CW01 314 aa17.82■□□□□ 0.44
LINC00648-204ENST00000557749 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
LINC00648-204ENST00000557749 LMTK3Q96Q04 1460 aa17.81■□□□□ 0.44
LINC00648-204ENST00000557749 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
LINC00648-204ENST00000557749 SETD1BQ9UPS6 1966 aaKnown RBP17.79■□□□□ 0.44
LINC00648-204ENST00000557749 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.44
LINC00648-204ENST00000557749 MROH2AA6NES4 1674 aa17.77■□□□□ 0.44
LINC00648-204ENST00000557749 PREX1Q8TCU6 1659 aa17.77■□□□□ 0.44
LINC00648-204ENST00000557749 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
LINC00648-204ENST00000557749 DHX29Q7Z478 1369 aaKnown RBP17.77■□□□□ 0.43
LINC00648-204ENST00000557749 UHRF1BP1Q6BDS2 1440 aa17.75■□□□□ 0.43
LINC00648-204ENST00000557749 NPATQ14207 1427 aa17.74■□□□□ 0.43
LINC00648-204ENST00000557749 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
LINC00648-204ENST00000557749 C3P01024 1663 aa17.73■□□□□ 0.43
LINC00648-204ENST00000557749 GGT6Q6P531 493 aa17.7■□□□□ 0.42
LINC00648-204ENST00000557749 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
LINC00648-204ENST00000557749 ZMYM3Q14202 1370 aa17.69■□□□□ 0.42
LINC00648-204ENST00000557749 CEBPAP49715 358 aaPredicted RBP17.69■□□□□ 0.42
LINC00648-204ENST00000557749 FGD6Q6ZV73 1430 aa17.68■□□□□ 0.42
LINC00648-204ENST00000557749 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
LINC00648-204ENST00000557749 KIF3BO15066 747 aa17.66■□□□□ 0.42
LINC00648-204ENST00000557749 CLTCQ00610 1675 aaKnown RBP17.66■□□□□ 0.42
LINC00648-204ENST00000557749 KDM5DQ9BY66 1539 aa17.66■□□□□ 0.42
LINC00648-204ENST00000557749 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
LINC00648-204ENST00000557749 TCOF1Q13428 1488 aaKnown RBP17.65■□□□□ 0.42
LINC00648-204ENST00000557749 HSPA2P54652 639 aa17.64■□□□□ 0.41
LINC00648-204ENST00000557749 DUOX2Q9NRD8 1548 aa17.63■□□□□ 0.41
LINC00648-204ENST00000557749 WASHC2CQ9Y4E1 1318 aa17.62■□□□□ 0.41
LINC00648-204ENST00000557749 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
LINC00648-204ENST00000557749 CROCC2H7BZ55 1655 aa17.61■□□□□ 0.41
LINC00648-204ENST00000557749 DAPK1P53355 1430 aa17.6■□□□□ 0.41
LINC00648-204ENST00000557749 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
LINC00648-204ENST00000557749 ERBINQ96RT1 1412 aa17.6■□□□□ 0.41
LINC00648-204ENST00000557749 RNF17Q9BXT8 1623 aaKnown RBP17.6■□□□□ 0.41
LINC00648-204ENST00000557749 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
LINC00648-204ENST00000557749 ABCC5O15440 1437 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 ANKRD30AQ9BXX3 1397 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
LINC00648-204ENST00000557749 PZPP20742 1482 aa17.58■□□□□ 0.41
LINC00648-204ENST00000557749 ZNF142P52746 1687 aaPredicted RBP17.56■□□□□ 0.4
LINC00648-204ENST00000557749 MYO3AQ8NEV4 1616 aa17.55■□□□□ 0.4
LINC00648-204ENST00000557749 PTPRTO14522 1441 aa17.54■□□□□ 0.4
LINC00648-204ENST00000557749 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
LINC00648-204ENST00000557749 PLA2R1Q13018 1463 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 SPDYE1Q8NFV5 336 aaPredicted RBP17.53■□□□□ 0.4
LINC00648-204ENST00000557749 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 KANK1Q14678 1352 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 TNRQ92752 1358 aa17.53■□□□□ 0.4
LINC00648-204ENST00000557749 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
LINC00648-204ENST00000557749 ABCC3O15438 1527 aa17.52■□□□□ 0.39
LINC00648-204ENST00000557749 A2ML1A8K2U0 1454 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 ADGRL2O95490 1459 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 NLRP1Q9C000 1473 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 PKD2Q13563 968 aa17.51■□□□□ 0.39
LINC00648-204ENST00000557749 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
LINC00648-204ENST00000557749 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
LINC00648-204ENST00000557749 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
LINC00648-204ENST00000557749 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
LINC00648-204ENST00000557749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC00648-204ENST00000557749 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 MROH1Q8NDA8 1641 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
LINC00648-204ENST00000557749 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
LINC00648-204ENST00000557749 ILDR1Q86SU0 546 aaPredicted RBP17.45■□□□□ 0.38
LINC00648-204ENST00000557749 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
LINC00648-204ENST00000557749 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
LINC00648-204ENST00000557749 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
LINC00648-204ENST00000557749 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
LINC00648-204ENST00000557749 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
LINC00648-204ENST00000557749 ANKRD50Q9ULJ7 1429 aa17.42■□□□□ 0.38
LINC00648-204ENST00000557749 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
LINC00648-204ENST00000557749 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
LINC00648-204ENST00000557749 CEP152O94986 1710 aa17.41■□□□□ 0.38
LINC00648-204ENST00000557749 CERKQ8TCT0 537 aa17.41■□□□□ 0.38
LINC00648-204ENST00000557749 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
LINC00648-204ENST00000557749 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
LINC00648-204ENST00000557749 CHRDL2Q6WN34 429 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms