RNA–Protein interactions for RNA: ENST00000557729.1

LINC01956-201, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 5 BASIC

Gene LINC01956, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-201ENST00000557729 RNF17Q9BXT8 1623 aaKnown RBP30.41■■■□□ 2.46
LINC01956-201ENST00000557729 NAIPQ13075 1403 aa30.4■■■□□ 2.46
LINC01956-201ENST00000557729 GCC2Q8IWJ2 1684 aa30.39■■■□□ 2.45
LINC01956-201ENST00000557729 CNTLNQ9NXG0 1405 aa30.39■■■□□ 2.45
LINC01956-201ENST00000557729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.38■■■□□ 2.45
LINC01956-201ENST00000557729 RIMS1Q86UR5 1692 aaKnown RBP30.38■■■□□ 2.45
LINC01956-201ENST00000557729 WASHC2CQ9Y4E1 1318 aa30.37■■■□□ 2.45
LINC01956-201ENST00000557729 KANK1Q14678 1352 aa30.36■■■□□ 2.45
LINC01956-201ENST00000557729 FAM135AQ9P2D6 1515 aa30.35■■■□□ 2.45
LINC01956-201ENST00000557729 TRIM26Q12899 539 aaPredicted RBP30.34■■■□□ 2.45
LINC01956-201ENST00000557729 KDM5DQ9BY66 1539 aa30.33■■■□□ 2.45
LINC01956-201ENST00000557729 DEPDC5O75140 1603 aa30.33■■■□□ 2.45
LINC01956-201ENST00000557729 PRDM15P57071 1507 aaPredicted RBP30.32■■■□□ 2.44
LINC01956-201ENST00000557729 PTPRMP28827 1452 aa30.32■■■□□ 2.44
LINC01956-201ENST00000557729 MROH1Q8NDA8 1641 aa30.32■■■□□ 2.44
LINC01956-201ENST00000557729 CLTCQ00610 1675 aaKnown RBP30.31■■■□□ 2.44
LINC01956-201ENST00000557729 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
LINC01956-201ENST00000557729 ZC3H13Q5T200 1668 aaKnown RBP30.27■■■□□ 2.44
LINC01956-201ENST00000557729 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
LINC01956-201ENST00000557729 MROH2AA6NES4 1674 aa30.27■■■□□ 2.44
LINC01956-201ENST00000557729 UNC13BO14795 1591 aa30.26■■■□□ 2.43
LINC01956-201ENST00000557729 SETD5Q9C0A6 1442 aa30.26■■■□□ 2.43
LINC01956-201ENST00000557729 ABCC3O15438 1527 aa30.26■■■□□ 2.43
LINC01956-201ENST00000557729 ZMYM3Q14202 1370 aa30.26■■■□□ 2.43
LINC01956-201ENST00000557729 CEBPAP49715 358 aaPredicted RBP30.23■■■□□ 2.43
LINC01956-201ENST00000557729 CEP152O94986 1710 aa30.22■■■□□ 2.43
LINC01956-201ENST00000557729 NUP155O75694 1391 aa30.22■■■□□ 2.43
LINC01956-201ENST00000557729 TRIM52Q96A61 297 aa30.21■■■□□ 2.43
LINC01956-201ENST00000557729 VWDEQ8N2E2 1590 aa30.2■■■□□ 2.43
LINC01956-201ENST00000557729 C3P01024 1663 aa30.2■■■□□ 2.42
LINC01956-201ENST00000557729 ACIN1Q9UKV3 1341 aaKnown RBP30.18■■■□□ 2.42
LINC01956-201ENST00000557729 LMTK2Q8IWU2 1503 aa30.17■■■□□ 2.42
LINC01956-201ENST00000557729 CAMSAP1Q5T5Y3 1602 aa30.16■■■□□ 2.42
LINC01956-201ENST00000557729 RAB3GAP2Q9H2M9 1393 aa30.15■■■□□ 2.42
LINC01956-201ENST00000557729 IQGAP3Q86VI3 1631 aa30.14■■■□□ 2.42
LINC01956-201ENST00000557729 PZPP20742 1482 aa30.13■■■□□ 2.41
LINC01956-201ENST00000557729 ARHGAP31Q2M1Z3 1444 aa30.11■■■□□ 2.41
LINC01956-201ENST00000557729 TET3O43151 1660 aa30.1■■■□□ 2.41
LINC01956-201ENST00000557729 NPATQ14207 1427 aa30.09■■■□□ 2.41
LINC01956-201ENST00000557729 EFCAB6Q5THR3 1501 aa30.08■■■□□ 2.41
LINC01956-201ENST00000557729 HRCP23327 699 aa30.06■■■□□ 2.4
LINC01956-201ENST00000557729 FBXO31Q5XUX0 539 aaPredicted RBP30.06■■■□□ 2.4
LINC01956-201ENST00000557729 SLC4A1APQ9BWU0 796 aaKnown RBP30.04■■■□□ 2.4
LINC01956-201ENST00000557729 RPRD2Q5VT52 1461 aaKnown RBP30.02■■■□□ 2.4
LINC01956-201ENST00000557729 ERVK-7P63135 1459 aa30.01■■■□□ 2.4
LINC01956-201ENST00000557729 TNRQ92752 1358 aa30.01■■■□□ 2.39
LINC01956-201ENST00000557729 SPATA31D1Q6ZQQ2 1576 aa29.98■■■□□ 2.39
LINC01956-201ENST00000557729 PREX1Q8TCU6 1659 aa29.98■■■□□ 2.39
LINC01956-201ENST00000557729 SETD1BQ9UPS6 1966 aaKnown RBP29.97■■■□□ 2.39
LINC01956-201ENST00000557729 UHRF1BP1Q6BDS2 1440 aa29.97■■■□□ 2.39
LINC01956-201ENST00000557729 CFAP65Q6ZU64 1925 aaKnown RBP29.97■■■□□ 2.39
LINC01956-201ENST00000557729 E9PCH4 1651 aa29.97■■■□□ 2.39
LINC01956-201ENST00000557729 PKD2Q13563 968 aa29.96■■■□□ 2.39
LINC01956-201ENST00000557729 MPHOSPH9Q99550 1183 aa29.96■■■□□ 2.39
LINC01956-201ENST00000557729 PCGF6Q9BYE7 350 aa29.96■■■□□ 2.39
LINC01956-201ENST00000557729 NOS1P29475 1434 aa29.91■■■□□ 2.38
LINC01956-201ENST00000557729 MYO3AQ8NEV4 1616 aa29.91■■■□□ 2.38
LINC01956-201ENST00000557729 NLRP1Q9C000 1473 aa29.89■■■□□ 2.38
LINC01956-201ENST00000557729 SLC52A1Q9NWF4 448 aa29.85■■■□□ 2.37
LINC01956-201ENST00000557729 LMTK3Q96Q04 1460 aa29.85■■■□□ 2.37
LINC01956-201ENST00000557729 SYNMO15061 1565 aa29.85■■■□□ 2.37
LINC01956-201ENST00000557729 A2ML1A8K2U0 1454 aa29.84■■■□□ 2.37
LINC01956-201ENST00000557729 CEP170BQ9Y4F5 1589 aaPredicted RBP29.83■■■□□ 2.37
LINC01956-201ENST00000557729 FOXD1Q16676 465 aa29.83■■■□□ 2.37
LINC01956-201ENST00000557729 SPHKAPQ2M3C7 1700 aa29.82■■■□□ 2.36
LINC01956-201ENST00000557729 PTPRTO14522 1441 aa29.81■■■□□ 2.36
LINC01956-201ENST00000557729 ZNF142P52746 1687 aaPredicted RBP29.81■■■□□ 2.36
LINC01956-201ENST00000557729 IDI1Q13907 227 aa29.8■■■□□ 2.36
LINC01956-201ENST00000557729 STAG3Q9UJ98 1225 aa29.8■■■□□ 2.36
LINC01956-201ENST00000557729 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
LINC01956-201ENST00000557729 TRPM2O94759 1503 aa29.76■■■□□ 2.36
LINC01956-201ENST00000557729 HSPA2P54652 639 aa29.76■■■□□ 2.35
LINC01956-201ENST00000557729 THEMISQ8N1K5 641 aaPredicted RBP29.74■■■□□ 2.35
LINC01956-201ENST00000557729 PIK3C2BO00750 1634 aa29.74■■■□□ 2.35
LINC01956-201ENST00000557729 CHGAP10645 457 aaKnown RBP29.72■■■□□ 2.35
LINC01956-201ENST00000557729 PLA2R1Q13018 1463 aa29.72■■■□□ 2.35
LINC01956-201ENST00000557729 CCDC144AA2RUR9 1427 aa29.69■■■□□ 2.34
LINC01956-201ENST00000557729 UBR1Q8IWV7 1749 aa29.68■■■□□ 2.34
LINC01956-201ENST00000557729 ADGRB3O60242 1522 aa29.68■■■□□ 2.34
LINC01956-201ENST00000557729 CLTCL1P53675 1640 aa29.67■■■□□ 2.34
LINC01956-201ENST00000557729 KDM5AP29375 1690 aaKnown RBP29.66■■■□□ 2.34
LINC01956-201ENST00000557729 DHX57Q6P158 1386 aaKnown RBP29.63■■■□□ 2.33
LINC01956-201ENST00000557729 ANKRD30BQ9BXX2 1392 aa29.63■■■□□ 2.33
LINC01956-201ENST00000557729 TMEM131LA2VDJ0 1609 aa29.61■■■□□ 2.33
LINC01956-201ENST00000557729 KIF1BO60333 1816 aa29.59■■■□□ 2.33
LINC01956-201ENST00000557729 ANKLE2Q86XL3 938 aa29.59■■■□□ 2.33
LINC01956-201ENST00000557729 ZNF326Q5BKZ1 582 aaKnown RBP29.58■■■□□ 2.33
LINC01956-201ENST00000557729 TMEM2Q9UHN6 1383 aa29.58■■■□□ 2.33
LINC01956-201ENST00000557729 EID1Q9Y6B2 187 aa29.57■■■□□ 2.32
LINC01956-201ENST00000557729 HDGFP51858 240 aaKnown RBP29.56■■■□□ 2.32
LINC01956-201ENST00000557729 SLIT1O75093 1534 aa29.55■■■□□ 2.32
LINC01956-201ENST00000557729 MYO5BQ9ULV0 1848 aa29.55■■■□□ 2.32
LINC01956-201ENST00000557729 NCKAP5LQ9HCH0 1330 aa29.54■■■□□ 2.32
LINC01956-201ENST00000557729 ARHGAP23Q9P227 1491 aa29.54■■■□□ 2.32
LINC01956-201ENST00000557729 TXNDC2Q86VQ3 553 aa29.53■■■□□ 2.32
LINC01956-201ENST00000557729 RIMS2Q9UQ26 1411 aa29.51■■■□□ 2.31
LINC01956-201ENST00000557729 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.5■■■□□ 2.31
LINC01956-201ENST00000557729 DMRT2Q9Y5R5 561 aa29.5■■■□□ 2.31
LINC01956-201ENST00000557729 STRCQ7RTU9 1775 aa29.49■■■□□ 2.31
LINC01956-201ENST00000557729 SCAF11Q99590 1463 aaKnown RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms