RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
PRKCH-227ENST00000557599 KDM5DQ9BY66 1539 aa16.09■□□□□ 0.17
PRKCH-227ENST00000557599 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
PRKCH-227ENST00000557599 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.16
PRKCH-227ENST00000557599 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.16
PRKCH-227ENST00000557599 ZC3H13Q5T200 1668 aaKnown RBP16.06■□□□□ 0.16
PRKCH-227ENST00000557599 MROH1Q8NDA8 1641 aa16.06■□□□□ 0.16
PRKCH-227ENST00000557599 PZPP20742 1482 aa16.06■□□□□ 0.16
PRKCH-227ENST00000557599 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
PRKCH-227ENST00000557599 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
PRKCH-227ENST00000557599 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
PRKCH-227ENST00000557599 RSPH4AQ5TD94 716 aa16.04■□□□□ 0.16
PRKCH-227ENST00000557599 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
PRKCH-227ENST00000557599 CROCC2H7BZ55 1655 aa16.03■□□□□ 0.16
PRKCH-227ENST00000557599 MIA2Q96PC5 1412 aa16.02■□□□□ 0.16
PRKCH-227ENST00000557599 GGT6Q6P531 493 aa16■□□□□ 0.15
PRKCH-227ENST00000557599 MYOM3Q5VTT5 1437 aa16■□□□□ 0.15
PRKCH-227ENST00000557599 SPATA31D1Q6ZQQ2 1576 aa16■□□□□ 0.15
PRKCH-227ENST00000557599 ABCC3O15438 1527 aa15.99■□□□□ 0.15
PRKCH-227ENST00000557599 DEPDC5O75140 1603 aa15.97■□□□□ 0.15
PRKCH-227ENST00000557599 SHANK2Q9UPX8 1470 aa15.97■□□□□ 0.15
PRKCH-227ENST00000557599 PRDM15P57071 1507 aaPredicted RBP15.97■□□□□ 0.15
PRKCH-227ENST00000557599 PKD2Q13563 968 aa15.96■□□□□ 0.15
PRKCH-227ENST00000557599 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
PRKCH-227ENST00000557599 NLRP1Q9C000 1473 aa15.96■□□□□ 0.14
PRKCH-227ENST00000557599 CEP152O94986 1710 aa15.94■□□□□ 0.14
PRKCH-227ENST00000557599 TNRQ92752 1358 aa15.94■□□□□ 0.14
PRKCH-227ENST00000557599 MED14O60244 1454 aa15.94■□□□□ 0.14
PRKCH-227ENST00000557599 DUOX2Q9NRD8 1548 aa15.94■□□□□ 0.14
PRKCH-227ENST00000557599 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
PRKCH-227ENST00000557599 KIF3BO15066 747 aa15.93■□□□□ 0.14
PRKCH-227ENST00000557599 PTPN23Q9H3S7 1636 aa15.93■□□□□ 0.14
PRKCH-227ENST00000557599 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
PRKCH-227ENST00000557599 VWDEQ8N2E2 1590 aa15.92■□□□□ 0.14
PRKCH-227ENST00000557599 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
PRKCH-227ENST00000557599 UGGT1Q9NYU2 1555 aa15.91■□□□□ 0.14
PRKCH-227ENST00000557599 ZNF335Q9H4Z2 1342 aaPredicted RBP15.91■□□□□ 0.14
PRKCH-227ENST00000557599 UBR1Q8IWV7 1749 aa15.91■□□□□ 0.14
PRKCH-227ENST00000557599 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
PRKCH-227ENST00000557599 FBXO31Q5XUX0 539 aaPredicted RBP15.9■□□□□ 0.14
PRKCH-227ENST00000557599 ABCC5O15440 1437 aa15.89■□□□□ 0.13
PRKCH-227ENST00000557599 ERBINQ96RT1 1412 aa15.89■□□□□ 0.13
PRKCH-227ENST00000557599 FAM50AQ14320 339 aaKnown RBP15.89■□□□□ 0.13
PRKCH-227ENST00000557599 CPS1P31327 1500 aa15.89■□□□□ 0.13
PRKCH-227ENST00000557599 ARHGAP31Q2M1Z3 1444 aa15.88■□□□□ 0.13
PRKCH-227ENST00000557599 TSPY4P0CV99 314 aa15.88■□□□□ 0.13
PRKCH-227ENST00000557599 TSPY10P0CW01 314 aa15.88■□□□□ 0.13
PRKCH-227ENST00000557599 WASHC2CQ9Y4E1 1318 aa15.88■□□□□ 0.13
PRKCH-227ENST00000557599 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
PRKCH-227ENST00000557599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.13
PRKCH-227ENST00000557599 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
PRKCH-227ENST00000557599 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
PRKCH-227ENST00000557599 LMTK2Q8IWU2 1503 aa15.86■□□□□ 0.13
PRKCH-227ENST00000557599 DAPK1P53355 1430 aa15.85■□□□□ 0.13
PRKCH-227ENST00000557599 STRCP1A6NGW2 1772 aa15.85■□□□□ 0.13
PRKCH-227ENST00000557599 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
PRKCH-227ENST00000557599 SLIT1O75093 1534 aa15.84■□□□□ 0.13
PRKCH-227ENST00000557599 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
PRKCH-227ENST00000557599 SYNMO15061 1565 aa15.83■□□□□ 0.12
PRKCH-227ENST00000557599 ADGRL2O95490 1459 aa15.82■□□□□ 0.12
PRKCH-227ENST00000557599 NPHP4O75161 1426 aaPredicted RBP15.81■□□□□ 0.12
PRKCH-227ENST00000557599 PIK3C2BO00750 1634 aa15.79■□□□□ 0.12
PRKCH-227ENST00000557599 ITGAEP38570 1179 aa15.79■□□□□ 0.12
PRKCH-227ENST00000557599 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
PRKCH-227ENST00000557599 EFCAB6Q5THR3 1501 aa15.78■□□□□ 0.12
PRKCH-227ENST00000557599 XIRP1Q702N8 1843 aaKnown RBP15.75■□□□□ 0.11
PRKCH-227ENST00000557599 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
PRKCH-227ENST00000557599 LRRC7Q96NW7 1537 aa15.74■□□□□ 0.11
PRKCH-227ENST00000557599 SCAF11Q99590 1463 aaKnown RBP15.74■□□□□ 0.11
PRKCH-227ENST00000557599 CFAP65Q6ZU64 1925 aaKnown RBP15.74■□□□□ 0.11
PRKCH-227ENST00000557599 NOS1P29475 1434 aa15.73■□□□□ 0.11
PRKCH-227ENST00000557599 UNC13BO14795 1591 aa15.72■□□□□ 0.11
PRKCH-227ENST00000557599 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
PRKCH-227ENST00000557599 TET3O43151 1660 aa15.71■□□□□ 0.11
PRKCH-227ENST00000557599 UBAP1LF5GYI3 381 aa15.71■□□□□ 0.11
PRKCH-227ENST00000557599 ILDR2Q71H61 639 aa15.71■□□□□ 0.11
PRKCH-227ENST00000557599 ANKRD30AQ9BXX3 1397 aa15.71■□□□□ 0.11
PRKCH-227ENST00000557599 ADGRB3O60242 1522 aa15.7■□□□□ 0.1
PRKCH-227ENST00000557599 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
PRKCH-227ENST00000557599 RPRD2Q5VT52 1461 aaKnown RBP15.69■□□□□ 0.1
PRKCH-227ENST00000557599 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
PRKCH-227ENST00000557599 NWD1Q149M9 1564 aa15.67■□□□□ 0.1
PRKCH-227ENST00000557599 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
PRKCH-227ENST00000557599 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
PRKCH-227ENST00000557599 LTKP29376 864 aa15.66■□□□□ 0.1
PRKCH-227ENST00000557599 KANK1Q14678 1352 aa15.65■□□□□ 0.1
PRKCH-227ENST00000557599 ANKRD50Q9ULJ7 1429 aa15.64■□□□□ 0.09
PRKCH-227ENST00000557599 TMEM131LA2VDJ0 1609 aa15.64■□□□□ 0.09
PRKCH-227ENST00000557599 IQGAP3Q86VI3 1631 aa15.64■□□□□ 0.09
PRKCH-227ENST00000557599 CHIC2Q9UKJ5 165 aa15.63■□□□□ 0.09
PRKCH-227ENST00000557599 MYO5BQ9ULV0 1848 aa15.63■□□□□ 0.09
PRKCH-227ENST00000557599 E9PCH4 1651 aa15.63■□□□□ 0.09
PRKCH-227ENST00000557599 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
PRKCH-227ENST00000557599 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
PRKCH-227ENST00000557599 ZFYVE9O95405 1425 aa15.62■□□□□ 0.09
PRKCH-227ENST00000557599 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
PRKCH-227ENST00000557599 SOCS7O14512 581 aa15.61■□□□□ 0.09
PRKCH-227ENST00000557599 TOM1O60784 492 aa15.61■□□□□ 0.09
PRKCH-227ENST00000557599 HSPA1LP34931 641 aa15.61■□□□□ 0.09
PRKCH-227ENST00000557599 IDI1Q13907 227 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms