RNA–Protein interactions for RNA: ENST00000557512.5

CGRRF1-208, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 901 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-208ENST00000557512 STRCP1A6NGW2 1772 aa22.34■■□□□ 1.17
CGRRF1-208ENST00000557512 SYCP2Q9BX26 1530 aa22.33■■□□□ 1.17
CGRRF1-208ENST00000557512 UPF1Q92900 1129 aaKnown RBP eCLIP22.33■■□□□ 1.17
CGRRF1-208ENST00000557512 DEPDC5O75140 1603 aa22.31■■□□□ 1.16
CGRRF1-208ENST00000557512 SYNMO15061 1565 aa22.29■■□□□ 1.16
CGRRF1-208ENST00000557512 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
CGRRF1-208ENST00000557512 INO80Q9ULG1 1556 aaPredicted RBP22.28■■□□□ 1.16
CGRRF1-208ENST00000557512 EEA1Q15075 1411 aa22.27■■□□□ 1.16
CGRRF1-208ENST00000557512 FAM135BQ49AJ0 1406 aa22.27■■□□□ 1.16
CGRRF1-208ENST00000557512 LRRIQ1Q96JM4 1722 aa22.27■■□□□ 1.16
CGRRF1-208ENST00000557512 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
CGRRF1-208ENST00000557512 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
CGRRF1-208ENST00000557512 FAM135AQ9P2D6 1515 aa22.26■■□□□ 1.15
CGRRF1-208ENST00000557512 UGGT1Q9NYU2 1555 aa22.25■■□□□ 1.15
CGRRF1-208ENST00000557512 MIA2Q96PC5 1412 aa22.25■■□□□ 1.15
CGRRF1-208ENST00000557512 PZPP20742 1482 aa22.25■■□□□ 1.15
CGRRF1-208ENST00000557512 KIAA1107Q9UPP5 1409 aa22.24■■□□□ 1.15
CGRRF1-208ENST00000557512 NLRP1Q9C000 1473 aa22.23■■□□□ 1.15
CGRRF1-208ENST00000557512 GPATCH8Q9UKJ3 1502 aaKnown RBP22.21■■□□□ 1.15
CGRRF1-208ENST00000557512 PLEKHH2Q8IVE3 1493 aa22.15■■□□□ 1.14
CGRRF1-208ENST00000557512 DHX29Q7Z478 1369 aaKnown RBP22.15■■□□□ 1.14
CGRRF1-208ENST00000557512 KIF3BO15066 747 aa22.15■■□□□ 1.14
CGRRF1-208ENST00000557512 CFDP1Q9UEE9 299 aaPredicted RBP22.15■■□□□ 1.14
CGRRF1-208ENST00000557512 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.14
CGRRF1-208ENST00000557512 WASHC2CQ9Y4E1 1318 aa22.14■■□□□ 1.14
CGRRF1-208ENST00000557512 UBTFP17480 764 aaKnown RBP22.14■■□□□ 1.13
CGRRF1-208ENST00000557512 KDM5DQ9BY66 1539 aa22.14■■□□□ 1.13
CGRRF1-208ENST00000557512 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.13
CGRRF1-208ENST00000557512 TRIM52Q96A61 297 aa22.13■■□□□ 1.13
CGRRF1-208ENST00000557512 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
CGRRF1-208ENST00000557512 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
CGRRF1-208ENST00000557512 XIRP1Q702N8 1843 aaKnown RBP22.1■■□□□ 1.13
CGRRF1-208ENST00000557512 CASKIN1Q8WXD9 1431 aa22.08■■□□□ 1.13
CGRRF1-208ENST00000557512 ROBO1Q9Y6N7 1651 aa22.07■■□□□ 1.12
CGRRF1-208ENST00000557512 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
CGRRF1-208ENST00000557512 LTKP29376 864 aa22.06■■□□□ 1.12
CGRRF1-208ENST00000557512 JCADQ9P266 1359 aa22.06■■□□□ 1.12
CGRRF1-208ENST00000557512 ZNF644Q9H582 1327 aaPredicted RBP22.06■■□□□ 1.12
CGRRF1-208ENST00000557512 SCAF11Q99590 1463 aaKnown RBP22.05■■□□□ 1.12
CGRRF1-208ENST00000557512 TMEM94Q12767 1356 aa22.05■■□□□ 1.12
CGRRF1-208ENST00000557512 MBD5Q9P267 1494 aa22.03■■□□□ 1.12
CGRRF1-208ENST00000557512 ZNF772Q68DY9 489 aaPredicted RBP22.03■■□□□ 1.12
CGRRF1-208ENST00000557512 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.12
CGRRF1-208ENST00000557512 TXNDC2Q86VQ3 553 aa22.01■■□□□ 1.11
CGRRF1-208ENST00000557512 RBM33Q96EV2 1170 aaKnown RBP21.99■■□□□ 1.11
CGRRF1-208ENST00000557512 LRP6O75581 1613 aa21.98■■□□□ 1.11
CGRRF1-208ENST00000557512 RXRBP28702 533 aa21.98■■□□□ 1.11
CGRRF1-208ENST00000557512 NCOA2Q15596 1464 aa21.96■■□□□ 1.11
CGRRF1-208ENST00000557512 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
CGRRF1-208ENST00000557512 MAP3K1Q13233 1512 aa21.96■■□□□ 1.11
CGRRF1-208ENST00000557512 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
CGRRF1-208ENST00000557512 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
CGRRF1-208ENST00000557512 ERVK-7P63135 1459 aa21.95■■□□□ 1.1
CGRRF1-208ENST00000557512 PROSER2Q86WR7 435 aaPredicted RBP21.94■■□□□ 1.1
CGRRF1-208ENST00000557512 SLIT1O75093 1534 aa21.93■■□□□ 1.1
CGRRF1-208ENST00000557512 KCNA6P17658 529 aa21.93■■□□□ 1.1
CGRRF1-208ENST00000557512 SPATA31A6Q5VVP1 1343 aa21.93■■□□□ 1.1
CGRRF1-208ENST00000557512 SLAIN2Q9P270 581 aa21.93■■□□□ 1.1
CGRRF1-208ENST00000557512 PHLPP1O60346 1717 aa21.92■■□□□ 1.1
CGRRF1-208ENST00000557512 CDK12Q9NYV4 1490 aaPredicted RBP21.92■■□□□ 1.1
CGRRF1-208ENST00000557512 UBR1Q8IWV7 1749 aa21.92■■□□□ 1.1
CGRRF1-208ENST00000557512 EID1Q9Y6B2 187 aa21.9■■□□□ 1.1
CGRRF1-208ENST00000557512 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
CGRRF1-208ENST00000557512 ABCC3O15438 1527 aa21.89■■□□□ 1.09
CGRRF1-208ENST00000557512 FGD6Q6ZV73 1430 aa21.87■■□□□ 1.09
CGRRF1-208ENST00000557512 COL16A1Q07092 1604 aaPredicted RBP21.87■■□□□ 1.09
CGRRF1-208ENST00000557512 MSH6P52701 1360 aa21.85■■□□□ 1.09
CGRRF1-208ENST00000557512 PRDM15P57071 1507 aaPredicted RBP21.85■■□□□ 1.09
CGRRF1-208ENST00000557512 SLC26A8Q96RN1 970 aa21.83■■□□□ 1.09
CGRRF1-208ENST00000557512 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.08
CGRRF1-208ENST00000557512 TMEM2Q9UHN6 1383 aa21.82■■□□□ 1.08
CGRRF1-208ENST00000557512 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
CGRRF1-208ENST00000557512 TIAM1Q13009 1591 aa21.81■■□□□ 1.08
CGRRF1-208ENST00000557512 ZRANB1Q9UGI0 708 aa21.79■■□□□ 1.08
CGRRF1-208ENST00000557512 RGS12O14924 1447 aa21.79■■□□□ 1.08
CGRRF1-208ENST00000557512 AFF2P51816 1311 aa21.78■■□□□ 1.08
CGRRF1-208ENST00000557512 NKTRP30414 1462 aaKnown RBP21.77■■□□□ 1.08
CGRRF1-208ENST00000557512 RSPH4AQ5TD94 716 aa21.77■■□□□ 1.08
CGRRF1-208ENST00000557512 TET3O43151 1660 aa21.75■■□□□ 1.07
CGRRF1-208ENST00000557512 SETBP1Q9Y6X0 1596 aa21.75■■□□□ 1.07
CGRRF1-208ENST00000557512 NUTM2BA6NNL0 878 aaPredicted RBP21.75■■□□□ 1.07
CGRRF1-208ENST00000557512 NUTM2EB1AL46 878 aaPredicted RBP21.75■■□□□ 1.07
CGRRF1-208ENST00000557512 NUTM2DQ5VT03 806 aaPredicted RBP21.75■■□□□ 1.07
CGRRF1-208ENST00000557512 NUTM2AQ8IVF1 878 aaPredicted RBP21.75■■□□□ 1.07
CGRRF1-208ENST00000557512 CAMSAP2Q08AD1 1489 aa21.74■■□□□ 1.07
CGRRF1-208ENST00000557512 NWD1Q149M9 1564 aa21.73■■□□□ 1.07
CGRRF1-208ENST00000557512 RBM6P78332 1123 aaKnown RBP21.72■■□□□ 1.07
CGRRF1-208ENST00000557512 SHPRHQ149N8 1683 aa21.72■■□□□ 1.07
CGRRF1-208ENST00000557512 QTRT2Q9H974 415 aaKnown RBP21.71■■□□□ 1.07
CGRRF1-208ENST00000557512 MROH1Q8NDA8 1641 aa21.7■■□□□ 1.06
CGRRF1-208ENST00000557512 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
CGRRF1-208ENST00000557512 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
CGRRF1-208ENST00000557512 FOXD1Q16676 465 aa21.7■■□□□ 1.06
CGRRF1-208ENST00000557512 STAG3Q9UJ98 1225 aa21.7■■□□□ 1.06
CGRRF1-208ENST00000557512 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.06
CGRRF1-208ENST00000557512 AHDC1Q5TGY3 1603 aaPredicted RBP21.69■■□□□ 1.06
CGRRF1-208ENST00000557512 PIK3C2BO00750 1634 aa21.68■■□□□ 1.06
CGRRF1-208ENST00000557512 ARHGAP31Q2M1Z3 1444 aa21.67■■□□□ 1.06
CGRRF1-208ENST00000557512 CEP162Q5TB80 1403 aa21.66■■□□□ 1.06
CGRRF1-208ENST00000557512 ATAD2Q6PL18 1390 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms