RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
MTHFD1-215ENST00000557370 FGD6Q6ZV73 1430 aa10.35□□□□□ -0.75
MTHFD1-215ENST00000557370 CNKSR2Q8WXI2 1034 aa10.35□□□□□ -0.75
MTHFD1-215ENST00000557370 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
MTHFD1-215ENST00000557370 CEP170BQ9Y4F5 1589 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-215ENST00000557370 AGLP35573 1532 aa10.34□□□□□ -0.75
MTHFD1-215ENST00000557370 MYO3AQ8NEV4 1616 aa10.34□□□□□ -0.75
MTHFD1-215ENST00000557370 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
MTHFD1-215ENST00000557370 DIP2CQ9Y2E4 1556 aa10.34□□□□□ -0.75
MTHFD1-215ENST00000557370 ZNF142P52746 1687 aaPredicted RBP10.34□□□□□ -0.75
MTHFD1-215ENST00000557370 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
MTHFD1-215ENST00000557370 FAM50AQ14320 339 aaKnown RBP10.33□□□□□ -0.76
MTHFD1-215ENST00000557370 EFCAB2Q5VUJ9 269 aa10.33□□□□□ -0.76
MTHFD1-215ENST00000557370 NUP153P49790 1475 aaKnown RBP10.33□□□□□ -0.76
MTHFD1-215ENST00000557370 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
MTHFD1-215ENST00000557370 REREQ9P2R6 1566 aa10.31□□□□□ -0.76
MTHFD1-215ENST00000557370 AFAP1Q8N556 730 aa10.31□□□□□ -0.76
MTHFD1-215ENST00000557370 PLCH2O75038 1416 aa10.31□□□□□ -0.76
MTHFD1-215ENST00000557370 MROH2AA6NES4 1674 aa10.31□□□□□ -0.76
MTHFD1-215ENST00000557370 ZMYM3Q14202 1370 aa10.3□□□□□ -0.76
MTHFD1-215ENST00000557370 ITGAEP38570 1179 aa10.3□□□□□ -0.76
MTHFD1-215ENST00000557370 TRIM52Q96A61 297 aa10.3□□□□□ -0.76
MTHFD1-215ENST00000557370 YTHDC1Q96MU7 727 aaKnown RBP10.3□□□□□ -0.76
MTHFD1-215ENST00000557370 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
MTHFD1-215ENST00000557370 RNF17Q9BXT8 1623 aaKnown RBP10.29□□□□□ -0.76
MTHFD1-215ENST00000557370 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
MTHFD1-215ENST00000557370 MIA2Q96PC5 1412 aa10.29□□□□□ -0.76
MTHFD1-215ENST00000557370 POLR1AO95602 1720 aaPredicted RBP10.29□□□□□ -0.76
MTHFD1-215ENST00000557370 KDM5CP41229 1560 aa10.28□□□□□ -0.76
MTHFD1-215ENST00000557370 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
MTHFD1-215ENST00000557370 NCOA2Q15596 1464 aa10.28□□□□□ -0.76
MTHFD1-215ENST00000557370 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.76
MTHFD1-215ENST00000557370 PTPN23Q9H3S7 1636 aa10.27□□□□□ -0.77
MTHFD1-215ENST00000557370 PPP1R15AO75807 674 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-215ENST00000557370 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-215ENST00000557370 ARHGAP5Q13017 1502 aa10.26□□□□□ -0.77
MTHFD1-215ENST00000557370 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
MTHFD1-215ENST00000557370 GCC2Q8IWJ2 1684 aa10.25□□□□□ -0.77
MTHFD1-215ENST00000557370 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
MTHFD1-215ENST00000557370 VWDEQ8N2E2 1590 aa10.24□□□□□ -0.77
MTHFD1-215ENST00000557370 ANKLE2Q86XL3 938 aa10.24□□□□□ -0.77
MTHFD1-215ENST00000557370 CLTCQ00610 1675 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-215ENST00000557370 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
MTHFD1-215ENST00000557370 NAIPQ13075 1403 aa10.23□□□□□ -0.77
MTHFD1-215ENST00000557370 MLH3Q9UHC1 1453 aa10.23□□□□□ -0.77
MTHFD1-215ENST00000557370 SYNMO15061 1565 aa10.22□□□□□ -0.77
MTHFD1-215ENST00000557370 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-215ENST00000557370 MEX3CQ5U5Q3 659 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-215ENST00000557370 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
MTHFD1-215ENST00000557370 LRRIQ1Q96JM4 1722 aa10.21□□□□□ -0.77
MTHFD1-215ENST00000557370 ANP32CO43423 234 aa10.21□□□□□ -0.77
MTHFD1-215ENST00000557370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.77
MTHFD1-215ENST00000557370 NPHP4O75161 1426 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-215ENST00000557370 ROCK1Q13464 1354 aa10.2□□□□□ -0.78
MTHFD1-215ENST00000557370 CDK13Q14004 1512 aaKnown RBP10.2□□□□□ -0.78
MTHFD1-215ENST00000557370 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
MTHFD1-215ENST00000557370 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-215ENST00000557370 ZNF772Q68DY9 489 aaPredicted RBP10.19□□□□□ -0.78
MTHFD1-215ENST00000557370 GGT6Q6P531 493 aa10.18□□□□□ -0.78
MTHFD1-215ENST00000557370 RXRBP28702 533 aa10.17□□□□□ -0.78
MTHFD1-215ENST00000557370 SIN3AQ96ST3 1273 aa10.17□□□□□ -0.78
MTHFD1-215ENST00000557370 ITSN2Q9NZM3 1697 aa10.17□□□□□ -0.78
MTHFD1-215ENST00000557370 KIF14Q15058 1648 aa10.17□□□□□ -0.78
MTHFD1-215ENST00000557370 SRCAPQ6ZRS2 3230 aa10.17□□□□□ -0.78
MTHFD1-215ENST00000557370 IQGAP1P46940 1657 aa10.16□□□□□ -0.78
MTHFD1-215ENST00000557370 THEMISQ8N1K5 641 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-215ENST00000557370 FAM135BQ49AJ0 1406 aa10.16□□□□□ -0.78
MTHFD1-215ENST00000557370 TNRQ92752 1358 aa10.15□□□□□ -0.78
MTHFD1-215ENST00000557370 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-215ENST00000557370 SUPT16HQ9Y5B9 1047 aaKnown RBP10.15□□□□□ -0.78
MTHFD1-215ENST00000557370 ABCC1P33527 1531 aa10.15□□□□□ -0.78
MTHFD1-215ENST00000557370 KIDINS220Q9ULH0 1771 aa10.15□□□□□ -0.78
MTHFD1-215ENST00000557370 STRCP1A6NGW2 1772 aa10.14□□□□□ -0.79
MTHFD1-215ENST00000557370 FAM135AQ9P2D6 1515 aa10.14□□□□□ -0.79
MTHFD1-215ENST00000557370 NEFLP07196 543 aa10.14□□□□□ -0.79
MTHFD1-215ENST00000557370 DDX10Q13206 875 aaKnown RBP10.14□□□□□ -0.79
MTHFD1-215ENST00000557370 JCADQ9P266 1359 aa10.14□□□□□ -0.79
MTHFD1-215ENST00000557370 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-215ENST00000557370 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-215ENST00000557370 NUTM2DQ5VT03 806 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-215ENST00000557370 NUTM2AQ8IVF1 878 aaPredicted RBP10.13□□□□□ -0.79
MTHFD1-215ENST00000557370 ROBO1Q9Y6N7 1651 aa10.12□□□□□ -0.79
MTHFD1-215ENST00000557370 MED14O60244 1454 aa10.12□□□□□ -0.79
MTHFD1-215ENST00000557370 DEPDC5O75140 1603 aa10.12□□□□□ -0.79
MTHFD1-215ENST00000557370 UGGT1Q9NYU2 1555 aa10.11□□□□□ -0.79
MTHFD1-215ENST00000557370 ERICH6BQ5W0A0 696 aa10.11□□□□□ -0.79
MTHFD1-215ENST00000557370 SPAG9O60271 1321 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-215ENST00000557370 PHLPP1O60346 1717 aa10.1□□□□□ -0.79
MTHFD1-215ENST00000557370 CDK12Q9NYV4 1490 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-215ENST00000557370 SETBP1Q9Y6X0 1596 aa10.09□□□□□ -0.79
MTHFD1-215ENST00000557370 EIF4G2P78344 907 aaKnown RBP eCLIP10.09□□□□□ -0.79
MTHFD1-215ENST00000557370 ADGBQ8N7X0 1667 aa10.09□□□□□ -0.79
MTHFD1-215ENST00000557370 DAPK1P53355 1430 aa10.08□□□□□ -0.8
MTHFD1-215ENST00000557370 FBXO31Q5XUX0 539 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-215ENST00000557370 ZNF777Q9ULD5 760 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-215ENST00000557370 A2MP01023 1474 aa10.08□□□□□ -0.8
MTHFD1-215ENST00000557370 SPATA31A6Q5VVP1 1343 aa10.07□□□□□ -0.8
MTHFD1-215ENST00000557370 TROQ12816 1431 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-215ENST00000557370 CDC42BPBQ9Y5S2 1711 aa10.07□□□□□ -0.8
MTHFD1-215ENST00000557370 SAMD9LQ8IVG5 1584 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms