RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
PSEN1-221ENST00000557293 ADGBQ8N7X0 1667 aa20.51■□□□□ 0.87
PSEN1-221ENST00000557293 TNRQ92752 1358 aa20.51■□□□□ 0.87
PSEN1-221ENST00000557293 ALKQ9UM73 1620 aa20.51■□□□□ 0.87
PSEN1-221ENST00000557293 CPS1P31327 1500 aa20.51■□□□□ 0.87
PSEN1-221ENST00000557293 RTEL1-TNFRSF6BF6WH68 1400 aa20.51■□□□□ 0.87
PSEN1-221ENST00000557293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.48■□□□□ 0.87
PSEN1-221ENST00000557293 KIF3BO15066 747 aa20.48■□□□□ 0.87
PSEN1-221ENST00000557293 ANKLE2Q86XL3 938 aa20.48■□□□□ 0.87
PSEN1-221ENST00000557293 VWDEQ8N2E2 1590 aa20.47■□□□□ 0.87
PSEN1-221ENST00000557293 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
PSEN1-221ENST00000557293 PZPP20742 1482 aa20.46■□□□□ 0.87
PSEN1-221ENST00000557293 POLR1AO95602 1720 aaPredicted RBP20.46■□□□□ 0.87
PSEN1-221ENST00000557293 THEMISQ8N1K5 641 aaPredicted RBP20.45■□□□□ 0.86
PSEN1-221ENST00000557293 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
PSEN1-221ENST00000557293 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
PSEN1-221ENST00000557293 MED14O60244 1454 aa20.43■□□□□ 0.86
PSEN1-221ENST00000557293 WASHC2CQ9Y4E1 1318 aa20.42■□□□□ 0.86
PSEN1-221ENST00000557293 NPHP4O75161 1426 aaPredicted RBP20.41■□□□□ 0.86
PSEN1-221ENST00000557293 KDM5DQ9BY66 1539 aa20.39■□□□□ 0.85
PSEN1-221ENST00000557293 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
PSEN1-221ENST00000557293 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
PSEN1-221ENST00000557293 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
PSEN1-221ENST00000557293 DEPDC5O75140 1603 aa20.37■□□□□ 0.85
PSEN1-221ENST00000557293 UGGT1Q9NYU2 1555 aa20.37■□□□□ 0.85
PSEN1-221ENST00000557293 STRCP1A6NGW2 1772 aa20.36■□□□□ 0.85
PSEN1-221ENST00000557293 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
PSEN1-221ENST00000557293 RGS17Q9UGC6 210 aaPredicted RBP20.36■□□□□ 0.85
PSEN1-221ENST00000557293 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
PSEN1-221ENST00000557293 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
PSEN1-221ENST00000557293 CCDC141Q6ZP82 1450 aa20.34■□□□□ 0.85
PSEN1-221ENST00000557293 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-221ENST00000557293 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
PSEN1-221ENST00000557293 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
PSEN1-221ENST00000557293 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
PSEN1-221ENST00000557293 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
PSEN1-221ENST00000557293 LTKP29376 864 aa20.26■□□□□ 0.83
PSEN1-221ENST00000557293 TSPY4P0CV99 314 aa20.25■□□□□ 0.83
PSEN1-221ENST00000557293 TSPY10P0CW01 314 aa20.25■□□□□ 0.83
PSEN1-221ENST00000557293 ABCC3O15438 1527 aa20.25■□□□□ 0.83
PSEN1-221ENST00000557293 ARHGEF5Q12774 1597 aa20.24■□□□□ 0.83
PSEN1-221ENST00000557293 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
PSEN1-221ENST00000557293 ZC3H13Q5T200 1668 aaKnown RBP20.23■□□□□ 0.83
PSEN1-221ENST00000557293 RNF17Q9BXT8 1623 aaKnown RBP20.22■□□□□ 0.83
PSEN1-221ENST00000557293 SYNMO15061 1565 aa20.21■□□□□ 0.83
PSEN1-221ENST00000557293 TXNDC2Q86VQ3 553 aa20.19■□□□□ 0.82
PSEN1-221ENST00000557293 MROH1Q8NDA8 1641 aa20.19■□□□□ 0.82
PSEN1-221ENST00000557293 ARHGAP23Q9P227 1491 aa20.18■□□□□ 0.82
PSEN1-221ENST00000557293 POTEAQ6S8J7 498 aa20.18■□□□□ 0.82
PSEN1-221ENST00000557293 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
PSEN1-221ENST00000557293 SCAF11Q99590 1463 aaKnown RBP20.18■□□□□ 0.82
PSEN1-221ENST00000557293 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
PSEN1-221ENST00000557293 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
PSEN1-221ENST00000557293 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
PSEN1-221ENST00000557293 SLIT1O75093 1534 aa20.15■□□□□ 0.82
PSEN1-221ENST00000557293 MAST1Q9Y2H9 1570 aa20.15■□□□□ 0.82
PSEN1-221ENST00000557293 EIF2AK4Q9P2K8 1649 aaKnown RBP20.11■□□□□ 0.81
PSEN1-221ENST00000557293 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
PSEN1-221ENST00000557293 CEP152O94986 1710 aa20.1■□□□□ 0.81
PSEN1-221ENST00000557293 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
PSEN1-221ENST00000557293 TMEM94Q12767 1356 aa20.08■□□□□ 0.8
PSEN1-221ENST00000557293 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
PSEN1-221ENST00000557293 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
PSEN1-221ENST00000557293 LRRC9Q6ZRR7 1453 aa20.06■□□□□ 0.8
PSEN1-221ENST00000557293 KCNA6P17658 529 aa20.06■□□□□ 0.8
PSEN1-221ENST00000557293 RBM33Q96EV2 1170 aaKnown RBP20.05■□□□□ 0.8
PSEN1-221ENST00000557293 DUOX2Q9NRD8 1548 aa20.04■□□□□ 0.8
PSEN1-221ENST00000557293 IDI1Q13907 227 aa20.04■□□□□ 0.8
PSEN1-221ENST00000557293 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
PSEN1-221ENST00000557293 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
PSEN1-221ENST00000557293 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
PSEN1-221ENST00000557293 TET3O43151 1660 aa20.02■□□□□ 0.8
PSEN1-221ENST00000557293 MAP3K1Q13233 1512 aa20.02■□□□□ 0.79
PSEN1-221ENST00000557293 MYOM3Q5VTT5 1437 aa20.01■□□□□ 0.79
PSEN1-221ENST00000557293 RRP7BPQ9NSQ0 103 aa20■□□□□ 0.79
PSEN1-221ENST00000557293 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
PSEN1-221ENST00000557293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.792e-7■□□□□ 10.6
PSEN1-221ENST00000557293 ROBO1Q9Y6N7 1651 aa19.99■□□□□ 0.79
PSEN1-221ENST00000557293 KIF15Q9NS87 1388 aa19.98■□□□□ 0.79
PSEN1-221ENST00000557293 ABCC5O15440 1437 aa19.97■□□□□ 0.79
PSEN1-221ENST00000557293 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
PSEN1-221ENST00000557293 ERBINQ96RT1 1412 aa19.95■□□□□ 0.78
PSEN1-221ENST00000557293 SLAIN2Q9P270 581 aa19.95■□□□□ 0.78
PSEN1-221ENST00000557293 EFCAB6Q5THR3 1501 aa19.95■□□□□ 0.78
PSEN1-221ENST00000557293 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
PSEN1-221ENST00000557293 KDM5AP29375 1690 aaKnown RBP19.93■□□□□ 0.78
PSEN1-221ENST00000557293 NOS1P29475 1434 aa19.92■□□□□ 0.78
PSEN1-221ENST00000557293 LMTK2Q8IWU2 1503 aa19.91■□□□□ 0.78
PSEN1-221ENST00000557293 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
PSEN1-221ENST00000557293 JCADQ9P266 1359 aa19.9■□□□□ 0.78
PSEN1-221ENST00000557293 SETD1AO15047 1707 aaKnown RBP19.9■□□□□ 0.78
PSEN1-221ENST00000557293 NKTRP30414 1462 aaKnown RBP19.89■□□□□ 0.77
PSEN1-221ENST00000557293 KANK1Q14678 1352 aa19.89■□□□□ 0.77
PSEN1-221ENST00000557293 MSH6P52701 1360 aa19.88■□□□□ 0.77
PSEN1-221ENST00000557293 UPF1Q92900 1129 aaKnown RBP eCLIP19.87■□□□□ 0.77
PSEN1-221ENST00000557293 PHLPP1O60346 1717 aa19.86■□□□□ 0.77
PSEN1-221ENST00000557293 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
PSEN1-221ENST00000557293 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
PSEN1-221ENST00000557293 DAPK1P53355 1430 aa19.85■□□□□ 0.77
PSEN1-221ENST00000557293 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms