RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 A2ML1A8K2U0 1454 aa23.02■■□□□ 1.28
VRTN-202ENST00000557177 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
VRTN-202ENST00000557177 KIF3BO15066 747 aa23■■□□□ 1.27
VRTN-202ENST00000557177 PZPP20742 1482 aa22.99■■□□□ 1.27
VRTN-202ENST00000557177 ZNF335Q9H4Z2 1342 aaPredicted RBP22.97■■□□□ 1.27
VRTN-202ENST00000557177 MAP3K1Q13233 1512 aa22.97■■□□□ 1.27
VRTN-202ENST00000557177 MAST1Q9Y2H9 1570 aa22.97■■□□□ 1.27
VRTN-202ENST00000557177 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
VRTN-202ENST00000557177 TNRQ92752 1358 aa22.95■■□□□ 1.26
VRTN-202ENST00000557177 FBXO31Q5XUX0 539 aaPredicted RBP22.94■■□□□ 1.26
VRTN-202ENST00000557177 POLR1AO95602 1720 aaPredicted RBP22.94■■□□□ 1.26
VRTN-202ENST00000557177 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
VRTN-202ENST00000557177 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
VRTN-202ENST00000557177 TSPY4P0CV99 314 aa22.93■■□□□ 1.26
VRTN-202ENST00000557177 TSPY10P0CW01 314 aa22.93■■□□□ 1.26
VRTN-202ENST00000557177 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
VRTN-202ENST00000557177 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
VRTN-202ENST00000557177 MIA2Q96PC5 1412 aa22.9■■□□□ 1.26
VRTN-202ENST00000557177 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
VRTN-202ENST00000557177 ZC3H13Q5T200 1668 aaKnown RBP22.89■■□□□ 1.25
VRTN-202ENST00000557177 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.25
VRTN-202ENST00000557177 NLRP1Q9C000 1473 aa22.87■■□□□ 1.25
VRTN-202ENST00000557177 ABCC3O15438 1527 aa22.87■■□□□ 1.25
VRTN-202ENST00000557177 DISP3Q9P2K9 1392 aa22.86■■□□□ 1.25
VRTN-202ENST00000557177 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
VRTN-202ENST00000557177 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
VRTN-202ENST00000557177 SPATA31D1Q6ZQQ2 1576 aa22.83■■□□□ 1.25
VRTN-202ENST00000557177 DEPDC5O75140 1603 aa22.82■■□□□ 1.24
VRTN-202ENST00000557177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.81■■□□□ 1.24
VRTN-202ENST00000557177 UBAP1LF5GYI3 381 aa22.8■■□□□ 1.24
VRTN-202ENST00000557177 THEMISQ8N1K5 641 aaPredicted RBP22.8■■□□□ 1.24
VRTN-202ENST00000557177 DUOX2Q9NRD8 1548 aa22.8■■□□□ 1.24
VRTN-202ENST00000557177 MED14O60244 1454 aa22.79■■□□□ 1.24
VRTN-202ENST00000557177 CPS1P31327 1500 aa22.79■■□□□ 1.24
VRTN-202ENST00000557177 CROCC2H7BZ55 1655 aa22.79■■□□□ 1.24
VRTN-202ENST00000557177 CEP152O94986 1710 aa22.79■■□□□ 1.24
VRTN-202ENST00000557177 ANKLE2Q86XL3 938 aa22.78■■□□□ 1.24
VRTN-202ENST00000557177 ERVK-7P63135 1459 aa22.78■■□□□ 1.24
VRTN-202ENST00000557177 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
VRTN-202ENST00000557177 VWDEQ8N2E2 1590 aa22.77■■□□□ 1.24
VRTN-202ENST00000557177 ILDR2Q71H61 639 aa22.77■■□□□ 1.24
VRTN-202ENST00000557177 PTPN23Q9H3S7 1636 aa22.75■■□□□ 1.23
VRTN-202ENST00000557177 PRDM15P57071 1507 aaPredicted RBP22.75■■□□□ 1.23
VRTN-202ENST00000557177 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
VRTN-202ENST00000557177 IQGAP1P46940 1657 aa22.74■■□□□ 1.23
VRTN-202ENST00000557177 ABCC5O15440 1437 aa22.74■■□□□ 1.23
VRTN-202ENST00000557177 KIF15Q9NS87 1388 aa22.73■■□□□ 1.23
VRTN-202ENST00000557177 ERBINQ96RT1 1412 aa22.72■■□□□ 1.23
VRTN-202ENST00000557177 UBR1Q8IWV7 1749 aa22.71■■□□□ 1.23
VRTN-202ENST00000557177 ARHGAP31Q2M1Z3 1444 aa22.69■■□□□ 1.22
VRTN-202ENST00000557177 CFAP65Q6ZU64 1925 aaKnown RBP22.69■■□□□ 1.22
VRTN-202ENST00000557177 DAPK1P53355 1430 aa22.68■■□□□ 1.22
VRTN-202ENST00000557177 FGD6Q6ZV73 1430 aa22.67■■□□□ 1.22
VRTN-202ENST00000557177 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
VRTN-202ENST00000557177 SOCS7O14512 581 aa22.65■■□□□ 1.22
VRTN-202ENST00000557177 APLP2Q06481 763 aa22.65■■□□□ 1.22
VRTN-202ENST00000557177 ALKQ9UM73 1620 aa22.64■■□□□ 1.22
VRTN-202ENST00000557177 TOM1O60784 492 aa22.64■■□□□ 1.21
VRTN-202ENST00000557177 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.21
VRTN-202ENST00000557177 ARHGAP23Q9P227 1491 aa22.63■■□□□ 1.21
VRTN-202ENST00000557177 SLIT1O75093 1534 aa22.62■■□□□ 1.21
VRTN-202ENST00000557177 SYNMO15061 1565 aa22.62■■□□□ 1.21
VRTN-202ENST00000557177 SCAF11Q99590 1463 aaKnown RBP22.61■■□□□ 1.21
VRTN-202ENST00000557177 LMTK2Q8IWU2 1503 aa22.59■■□□□ 1.21
VRTN-202ENST00000557177 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
VRTN-202ENST00000557177 HSPA1LP34931 641 aa22.59■■□□□ 1.21
VRTN-202ENST00000557177 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
VRTN-202ENST00000557177 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
VRTN-202ENST00000557177 PIK3C2BO00750 1634 aa22.58■■□□□ 1.21
VRTN-202ENST00000557177 ANKRD30AQ9BXX3 1397 aa22.58■■□□□ 1.21
VRTN-202ENST00000557177 KDM5AP29375 1690 aaKnown RBP22.56■■□□□ 1.2
VRTN-202ENST00000557177 KANK1Q14678 1352 aa22.56■■□□□ 1.2
VRTN-202ENST00000557177 LTKP29376 864 aa22.56■■□□□ 1.2
VRTN-202ENST00000557177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.2
VRTN-202ENST00000557177 ADGRL2O95490 1459 aa22.54■■□□□ 1.2
VRTN-202ENST00000557177 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
VRTN-202ENST00000557177 MED1Q15648 1581 aaPredicted RBP22.53■■□□□ 1.2
VRTN-202ENST00000557177 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.2
VRTN-202ENST00000557177 TXNDC2Q86VQ3 553 aa22.52■■□□□ 1.2
VRTN-202ENST00000557177 TMEM2Q9UHN6 1383 aa22.51■■□□□ 1.19
VRTN-202ENST00000557177 XIRP1Q702N8 1843 aaKnown RBP22.49■■□□□ 1.19
VRTN-202ENST00000557177 NOS1P29475 1434 aa22.48■■□□□ 1.19
VRTN-202ENST00000557177 EID1Q9Y6B2 187 aa22.48■■□□□ 1.19
VRTN-202ENST00000557177 IDI1Q13907 227 aa22.46■■□□□ 1.19
VRTN-202ENST00000557177 ADGRB3O60242 1522 aa22.45■■□□□ 1.18
VRTN-202ENST00000557177 TET3O43151 1660 aa22.43■■□□□ 1.18
VRTN-202ENST00000557177 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
VRTN-202ENST00000557177 RPRD2Q5VT52 1461 aaKnown RBP22.42■■□□□ 1.18
VRTN-202ENST00000557177 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
VRTN-202ENST00000557177 FAM50AQ14320 339 aaKnown RBP22.41■■□□□ 1.18
VRTN-202ENST00000557177 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
VRTN-202ENST00000557177 UNC13BO14795 1591 aa22.37■■□□□ 1.17
VRTN-202ENST00000557177 GCC2Q8IWJ2 1684 aa22.36■■□□□ 1.17
VRTN-202ENST00000557177 NWD1Q149M9 1564 aa22.35■■□□□ 1.17
VRTN-202ENST00000557177 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
VRTN-202ENST00000557177 KCNA6P17658 529 aa22.34■■□□□ 1.17
VRTN-202ENST00000557177 ZFYVE9O95405 1425 aa22.33■■□□□ 1.17
VRTN-202ENST00000557177 TMEM94Q12767 1356 aa22.33■■□□□ 1.17
VRTN-202ENST00000557177 SLC26A8Q96RN1 970 aa22.32■■□□□ 1.16
VRTN-202ENST00000557177 TMEM131LA2VDJ0 1609 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms