RNA–Protein interactions for RNA: ENST00000557093.1

SERPINA1-216, Transcript of serpin family A member 1, humanhuman

TSL 4

Gene SERPINA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-216ENST00000557093 ATP7AQ04656 1500 aa20.49■□□□□ 0.87
SERPINA1-216ENST00000557093 PLXNC1O60486 1568 aa20.49■□□□□ 0.87
SERPINA1-216ENST00000557093 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
SERPINA1-216ENST00000557093 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
SERPINA1-216ENST00000557093 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
SERPINA1-216ENST00000557093 UGGT1Q9NYU2 1555 aa20.46■□□□□ 0.87
SERPINA1-216ENST00000557093 SYCP2Q9BX26 1530 aa20.46■□□□□ 0.87
SERPINA1-216ENST00000557093 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
SERPINA1-216ENST00000557093 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
SERPINA1-216ENST00000557093 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
SERPINA1-216ENST00000557093 INO80Q9ULG1 1556 aaPredicted RBP20.4■□□□□ 0.86
SERPINA1-216ENST00000557093 XIRP1Q702N8 1843 aaKnown RBP20.39■□□□□ 0.86
SERPINA1-216ENST00000557093 ADGBQ8N7X0 1667 aa20.39■□□□□ 0.86
SERPINA1-216ENST00000557093 ROBO1Q9Y6N7 1651 aa20.39■□□□□ 0.86
SERPINA1-216ENST00000557093 NLRP1Q9C000 1473 aa20.39■□□□□ 0.85
SERPINA1-216ENST00000557093 MEX3CQ5U5Q3 659 aaKnown RBP20.39■□□□□ 0.85
SERPINA1-216ENST00000557093 PZPP20742 1482 aa20.38■□□□□ 0.85
SERPINA1-216ENST00000557093 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
SERPINA1-216ENST00000557093 ZNF772Q68DY9 489 aaPredicted RBP20.37■□□□□ 0.85
SERPINA1-216ENST00000557093 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
SERPINA1-216ENST00000557093 SRCAPQ6ZRS2 3230 aa20.35■□□□□ 0.85
SERPINA1-216ENST00000557093 JCADQ9P266 1359 aa20.34■□□□□ 0.85
SERPINA1-216ENST00000557093 PHLPP1O60346 1717 aa20.33■□□□□ 0.84
SERPINA1-216ENST00000557093 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
SERPINA1-216ENST00000557093 WASHC2CQ9Y4E1 1318 aa20.32■□□□□ 0.84
SERPINA1-216ENST00000557093 RXRBP28702 533 aa20.32■□□□□ 0.84
SERPINA1-216ENST00000557093 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
SERPINA1-216ENST00000557093 KIF3BO15066 747 aa20.29■□□□□ 0.84
SERPINA1-216ENST00000557093 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
SERPINA1-216ENST00000557093 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
SERPINA1-216ENST00000557093 LRRC9Q6ZRR7 1453 aa20.26■□□□□ 0.83
SERPINA1-216ENST00000557093 TMEM94Q12767 1356 aa20.26■□□□□ 0.83
SERPINA1-216ENST00000557093 KIAA1107Q9UPP5 1409 aa20.26■□□□□ 0.83
SERPINA1-216ENST00000557093 FOXD1Q16676 465 aa20.25■□□□□ 0.83
SERPINA1-216ENST00000557093 SCAF11Q99590 1463 aaKnown RBP20.24■□□□□ 0.83
SERPINA1-216ENST00000557093 ARHGAP35Q9NRY4 1499 aa20.24■□□□□ 0.83
SERPINA1-216ENST00000557093 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
SERPINA1-216ENST00000557093 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
SERPINA1-216ENST00000557093 EEA1Q15075 1411 aa20.23■□□□□ 0.83
SERPINA1-216ENST00000557093 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
SERPINA1-216ENST00000557093 GPATCH8Q9UKJ3 1502 aaKnown RBP20.22■□□□□ 0.83
SERPINA1-216ENST00000557093 DHX29Q7Z478 1369 aaKnown RBP20.22■□□□□ 0.83
SERPINA1-216ENST00000557093 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
SERPINA1-216ENST00000557093 LRP6O75581 1613 aa20.22■□□□□ 0.83
SERPINA1-216ENST00000557093 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
SERPINA1-216ENST00000557093 SPATA31A6Q5VVP1 1343 aa20.21■□□□□ 0.83
SERPINA1-216ENST00000557093 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
SERPINA1-216ENST00000557093 PROSER2Q86WR7 435 aaPredicted RBP20.2■□□□□ 0.82
SERPINA1-216ENST00000557093 RBM33Q96EV2 1170 aaKnown RBP20.2■□□□□ 0.82
SERPINA1-216ENST00000557093 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
SERPINA1-216ENST00000557093 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
SERPINA1-216ENST00000557093 NUTM2DQ5VT03 806 aaPredicted RBP20.19■□□□□ 0.82
SERPINA1-216ENST00000557093 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
SERPINA1-216ENST00000557093 LTKP29376 864 aa20.16■□□□□ 0.82
SERPINA1-216ENST00000557093 EID1Q9Y6B2 187 aa20.16■□□□□ 0.82
SERPINA1-216ENST00000557093 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
SERPINA1-216ENST00000557093 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
SERPINA1-216ENST00000557093 MSH6P52701 1360 aa20.15■□□□□ 0.82
SERPINA1-216ENST00000557093 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
SERPINA1-216ENST00000557093 COL16A1Q07092 1604 aaPredicted RBP20.14■□□□□ 0.81
SERPINA1-216ENST00000557093 CCNB3Q8WWL7 1395 aa20.14■□□□□ 0.81
SERPINA1-216ENST00000557093 MAP3K1Q13233 1512 aa20.13■□□□□ 0.81
SERPINA1-216ENST00000557093 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
SERPINA1-216ENST00000557093 RTEL1-TNFRSF6BF6WH68 1400 aa20.11■□□□□ 0.81
SERPINA1-216ENST00000557093 FGD6Q6ZV73 1430 aa20.11■□□□□ 0.81
SERPINA1-216ENST00000557093 KCNA6P17658 529 aa20.11■□□□□ 0.81
SERPINA1-216ENST00000557093 RGS12O14924 1447 aa20.1■□□□□ 0.81
SERPINA1-216ENST00000557093 AFF2P51816 1311 aa20.09■□□□□ 0.81
SERPINA1-216ENST00000557093 ERVK-7P63135 1459 aa20.09■□□□□ 0.81
SERPINA1-216ENST00000557093 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
SERPINA1-216ENST00000557093 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.81
SERPINA1-216ENST00000557093 SLIT1O75093 1534 aa20.07■□□□□ 0.8
SERPINA1-216ENST00000557093 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
SERPINA1-216ENST00000557093 ARHGAP23Q9P227 1491 aa20.06■□□□□ 0.8
SERPINA1-216ENST00000557093 TIAM1Q13009 1591 aa20.06■□□□□ 0.8
SERPINA1-216ENST00000557093 PRDM15P57071 1507 aaPredicted RBP20.06■□□□□ 0.8
SERPINA1-216ENST00000557093 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
SERPINA1-216ENST00000557093 ATAD2Q6PL18 1390 aa20.05■□□□□ 0.8
SERPINA1-216ENST00000557093 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
SERPINA1-216ENST00000557093 SLC26A8Q96RN1 970 aa20.03■□□□□ 0.8
SERPINA1-216ENST00000557093 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
SERPINA1-216ENST00000557093 MBD5Q9P267 1494 aa20.02■□□□□ 0.8
SERPINA1-216ENST00000557093 ABCC3O15438 1527 aa20.02■□□□□ 0.79
SERPINA1-216ENST00000557093 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
SERPINA1-216ENST00000557093 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
SERPINA1-216ENST00000557093 BCANQ96GW7 911 aa20■□□□□ 0.79
SERPINA1-216ENST00000557093 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
SERPINA1-216ENST00000557093 C8orf37Q96NL8 207 aa19.97■□□□□ 0.79
SERPINA1-216ENST00000557093 KDM5AP29375 1690 aaKnown RBP19.97■□□□□ 0.79
SERPINA1-216ENST00000557093 TMEM2Q9UHN6 1383 aa19.96■□□□□ 0.79
SERPINA1-216ENST00000557093 NGLY1Q96IV0 654 aa19.96■□□□□ 0.79
SERPINA1-216ENST00000557093 CCDC141Q6ZP82 1450 aa19.96■□□□□ 0.79
SERPINA1-216ENST00000557093 FYCO1Q9BQS8 1478 aa19.96■□□□□ 0.79
SERPINA1-216ENST00000557093 CEP152O94986 1710 aa19.96■□□□□ 0.79
SERPINA1-216ENST00000557093 AHDC1Q5TGY3 1603 aaPredicted RBP19.95■□□□□ 0.78
SERPINA1-216ENST00000557093 MTUS2Q5JR59 1369 aa19.95■□□□□ 0.78
SERPINA1-216ENST00000557093 NWD1Q149M9 1564 aa19.94■□□□□ 0.78
SERPINA1-216ENST00000557093 PIK3C2BO00750 1634 aa19.92■□□□□ 0.78
SERPINA1-216ENST00000557093 ATF3P18847 181 aa19.88■□□□□ 0.77
SERPINA1-216ENST00000557093 TET3O43151 1660 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms