RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 KDM5DQ9BY66 1539 aa27.74■■■□□ 2.03
XRCC3-217ENST00000556980 FAM135AQ9P2D6 1515 aa27.74■■■□□ 2.03
XRCC3-217ENST00000556980 RRP7BPQ9NSQ0 103 aa27.73■■■□□ 2.03
XRCC3-217ENST00000556980 WASHC2CQ9Y4E1 1318 aa27.72■■■□□ 2.03
XRCC3-217ENST00000556980 EIF2AK4Q9P2K8 1649 aaKnown RBP27.71■■■□□ 2.03
XRCC3-217ENST00000556980 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
XRCC3-217ENST00000556980 PTPRKQ15262 1439 aa27.7■■■□□ 2.03
XRCC3-217ENST00000556980 CHIC2Q9UKJ5 165 aa27.7■■■□□ 2.02
XRCC3-217ENST00000556980 ANKRD30AQ9BXX3 1397 aa27.7■■■□□ 2.02
XRCC3-217ENST00000556980 SETD1BQ9UPS6 1966 aaKnown RBP27.68■■■□□ 2.02
XRCC3-217ENST00000556980 RNF17Q9BXT8 1623 aaKnown RBP27.68■■■□□ 2.02
XRCC3-217ENST00000556980 ERBINQ96RT1 1412 aa27.67■■■□□ 2.02
XRCC3-217ENST00000556980 PZPP20742 1482 aa27.63■■■□□ 2.01
XRCC3-217ENST00000556980 NCOA1Q15788 1441 aa27.61■■■□□ 2.01
XRCC3-217ENST00000556980 ABCC3O15438 1527 aa27.61■■■□□ 2.01
XRCC3-217ENST00000556980 ADGRL2O95490 1459 aa27.6■■■□□ 2.01
XRCC3-217ENST00000556980 MROH1Q8NDA8 1641 aa27.59■■■□□ 2.01
XRCC3-217ENST00000556980 MYO3AQ8NEV4 1616 aa27.59■■■□□ 2.01
XRCC3-217ENST00000556980 FBXO31Q5XUX0 539 aaPredicted RBP27.58■■■□□ 2.01
XRCC3-217ENST00000556980 ZC3H13Q5T200 1668 aaKnown RBP27.58■■■□□ 2.01
XRCC3-217ENST00000556980 TNRQ92752 1358 aa27.57■■■□□ 2
XRCC3-217ENST00000556980 PRDM15P57071 1507 aaPredicted RBP27.56■■■□□ 2
XRCC3-217ENST00000556980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.54■■■□□ 2
XRCC3-217ENST00000556980 CEP170BQ9Y4F5 1589 aaPredicted RBP27.54■■■□□ 2
XRCC3-217ENST00000556980 DMRT2Q9Y5R5 561 aa27.53■■■□□ 2
XRCC3-217ENST00000556980 ZNF142P52746 1687 aaPredicted RBP27.52■■■□□ 2
XRCC3-217ENST00000556980 KANK1Q14678 1352 aa27.51■■□□□ 1.99
XRCC3-217ENST00000556980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.5■■□□□ 1.99
XRCC3-217ENST00000556980 CAMSAP1Q5T5Y3 1602 aa27.5■■□□□ 1.99
XRCC3-217ENST00000556980 A2ML1A8K2U0 1454 aa27.5■■□□□ 1.99
XRCC3-217ENST00000556980 DEPDC5O75140 1603 aa27.49■■□□□ 1.99
XRCC3-217ENST00000556980 STRCQ7RTU9 1775 aa27.49■■□□□ 1.99
XRCC3-217ENST00000556980 ANKRD50Q9ULJ7 1429 aa27.49■■□□□ 1.99
XRCC3-217ENST00000556980 CEP152O94986 1710 aa27.48■■□□□ 1.99
XRCC3-217ENST00000556980 ITGAEP38570 1179 aa27.48■■□□□ 1.99
XRCC3-217ENST00000556980 ROCK1Q13464 1354 aa27.46■■□□□ 1.99
XRCC3-217ENST00000556980 ERVK-7P63135 1459 aa27.44■■□□□ 1.98
XRCC3-217ENST00000556980 NLRP1Q9C000 1473 aa27.44■■□□□ 1.98
XRCC3-217ENST00000556980 PLA2R1Q13018 1463 aa27.44■■□□□ 1.98
XRCC3-217ENST00000556980 PTPRTO14522 1441 aa27.43■■□□□ 1.98
XRCC3-217ENST00000556980 SPATA31D1Q6ZQQ2 1576 aa27.43■■□□□ 1.98
XRCC3-217ENST00000556980 ARHGAP31Q2M1Z3 1444 aa27.42■■□□□ 1.98
XRCC3-217ENST00000556980 RRBP1Q9P2E9 1410 aaKnown RBP27.41■■□□□ 1.98
XRCC3-217ENST00000556980 NCKAP5LQ9HCH0 1330 aa27.41■■□□□ 1.98
XRCC3-217ENST00000556980 LMTK2Q8IWU2 1503 aa27.39■■□□□ 1.98
XRCC3-217ENST00000556980 VWDEQ8N2E2 1590 aa27.39■■□□□ 1.97
XRCC3-217ENST00000556980 PKD2Q13563 968 aa27.38■■□□□ 1.97
XRCC3-217ENST00000556980 UGGT1Q9NYU2 1555 aa27.35■■□□□ 1.97
XRCC3-217ENST00000556980 ILDR1Q86SU0 546 aaPredicted RBP27.35■■□□□ 1.97
XRCC3-217ENST00000556980 THEMISQ8N1K5 641 aaPredicted RBP27.34■■□□□ 1.97
XRCC3-217ENST00000556980 EFCAB6Q5THR3 1501 aa27.31■■□□□ 1.96
XRCC3-217ENST00000556980 CERKQ8TCT0 537 aa27.29■■□□□ 1.96
XRCC3-217ENST00000556980 UNC13BO14795 1591 aa27.29■■□□□ 1.96
XRCC3-217ENST00000556980 ANKLE2Q86XL3 938 aa27.27■■□□□ 1.96
XRCC3-217ENST00000556980 FBXO41Q8TF61 875 aa27.26■■□□□ 1.95
XRCC3-217ENST00000556980 RPRD2Q5VT52 1461 aaKnown RBP27.23■■□□□ 1.95
XRCC3-217ENST00000556980 CFAP65Q6ZU64 1925 aaKnown RBP27.23■■□□□ 1.95
XRCC3-217ENST00000556980 TET3O43151 1660 aa27.22■■□□□ 1.95
XRCC3-217ENST00000556980 POLR1AO95602 1720 aaPredicted RBP27.21■■□□□ 1.95
XRCC3-217ENST00000556980 NOS1P29475 1434 aa27.21■■□□□ 1.95
XRCC3-217ENST00000556980 NUP155O75694 1391 aa27.21■■□□□ 1.95
XRCC3-217ENST00000556980 NEURL4Q96JN8 1562 aa27.2■■□□□ 1.94
XRCC3-217ENST00000556980 STAG3Q9UJ98 1225 aa27.19■■□□□ 1.94
XRCC3-217ENST00000556980 UBR1Q8IWV7 1749 aa27.19■■□□□ 1.94
XRCC3-217ENST00000556980 SYNMO15061 1565 aa27.18■■□□□ 1.94
XRCC3-217ENST00000556980 ZNF335Q9H4Z2 1342 aaPredicted RBP27.17■■□□□ 1.94
XRCC3-217ENST00000556980 IQGAP3Q86VI3 1631 aa27.17■■□□□ 1.94
XRCC3-217ENST00000556980 NPHP4O75161 1426 aaPredicted RBP27.16■■□□□ 1.94
XRCC3-217ENST00000556980 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
XRCC3-217ENST00000556980 LTBP4Q8N2S1 1624 aa27.16■■□□□ 1.94
XRCC3-217ENST00000556980 IDI1Q13907 227 aa27.16■■□□□ 1.94
XRCC3-217ENST00000556980 NAIPQ13075 1403 aa27.16■■□□□ 1.94
XRCC3-217ENST00000556980 GCC2Q8IWJ2 1684 aa27.15■■□□□ 1.94
XRCC3-217ENST00000556980 MED14O60244 1454 aa27.14■■□□□ 1.94
XRCC3-217ENST00000556980 SLC52A1Q9NWF4 448 aa27.14■■□□□ 1.94
XRCC3-217ENST00000556980 HFM1A2PYH4 1435 aa27.12■■□□□ 1.93
XRCC3-217ENST00000556980 SCAF11Q99590 1463 aaKnown RBP27.12■■□□□ 1.93
XRCC3-217ENST00000556980 SLIT1O75093 1534 aa27.11■■□□□ 1.93
XRCC3-217ENST00000556980 ARHGAP23Q9P227 1491 aa27.11■■□□□ 1.93
XRCC3-217ENST00000556980 EID1Q9Y6B2 187 aa27.1■■□□□ 1.93
XRCC3-217ENST00000556980 TMEM2Q9UHN6 1383 aa27.09■■□□□ 1.93
XRCC3-217ENST00000556980 TXNDC2Q86VQ3 553 aa27.09■■□□□ 1.93
XRCC3-217ENST00000556980 ADGRB3O60242 1522 aa27.09■■□□□ 1.93
XRCC3-217ENST00000556980 E9PCH4 1651 aa27.08■■□□□ 1.93
XRCC3-217ENST00000556980 KDM5AP29375 1690 aaKnown RBP27.08■■□□□ 1.92
XRCC3-217ENST00000556980 IQGAP1P46940 1657 aa27.08■■□□□ 1.92
XRCC3-217ENST00000556980 LTKP29376 864 aa27.06■■□□□ 1.92
XRCC3-217ENST00000556980 IQSEC2Q5JU85 1478 aa27.04■■□□□ 1.92
XRCC3-217ENST00000556980 TRIM52Q96A61 297 aa27■■□□□ 1.91
XRCC3-217ENST00000556980 CHGAP10645 457 aaKnown RBP26.99■■□□□ 1.91
XRCC3-217ENST00000556980 CPS1P31327 1500 aa26.99■■□□□ 1.91
XRCC3-217ENST00000556980 TMEM131LA2VDJ0 1609 aa26.94■■□□□ 1.9
XRCC3-217ENST00000556980 HDGFP51858 240 aaKnown RBP26.92■■□□□ 1.9
XRCC3-217ENST00000556980 RIMS2Q9UQ26 1411 aa26.91■■□□□ 1.9
XRCC3-217ENST00000556980 PPP1R15AO75807 674 aaPredicted RBP26.91■■□□□ 1.9
XRCC3-217ENST00000556980 ZFYVE9O95405 1425 aa26.9■■□□□ 1.9
XRCC3-217ENST00000556980 BCANQ96GW7 911 aa26.9■■□□□ 1.9
XRCC3-217ENST00000556980 SPHKAPQ2M3C7 1700 aa26.9■■□□□ 1.9
XRCC3-217ENST00000556980 SLC4A1APQ9BWU0 796 aaKnown RBP26.89■■□□□ 1.9
XRCC3-217ENST00000556980 UBAP1LF5GYI3 381 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms