RNA–Protein interactions for RNA: ENST00000556968.2

SERPINA3-208, Transcript of serpin family A member 3, humanhuman

TSL 1 (best)

Gene SERPINA3, Length 1,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA3-208ENST00000556968 MYO3AQ8NEV4 1616 aa17.32■□□□□ 0.36
SERPINA3-208ENST00000556968 PTPRTO14522 1441 aa17.32■□□□□ 0.36
SERPINA3-208ENST00000556968 NCOA1Q15788 1441 aa17.32■□□□□ 0.36
SERPINA3-208ENST00000556968 KDM5DQ9BY66 1539 aa17.31■□□□□ 0.36
SERPINA3-208ENST00000556968 CERKQ8TCT0 537 aa17.31■□□□□ 0.36
SERPINA3-208ENST00000556968 ZNF142P52746 1687 aaPredicted RBP17.31■□□□□ 0.36
SERPINA3-208ENST00000556968 WASHC2CQ9Y4E1 1318 aa17.3■□□□□ 0.36
SERPINA3-208ENST00000556968 CAMSAP1Q5T5Y3 1602 aa17.3■□□□□ 0.36
SERPINA3-208ENST00000556968 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
SERPINA3-208ENST00000556968 CEP170BQ9Y4F5 1589 aaPredicted RBP17.29■□□□□ 0.36
SERPINA3-208ENST00000556968 RNF17Q9BXT8 1623 aaKnown RBP17.28■□□□□ 0.36
SERPINA3-208ENST00000556968 EIF2AK4Q9P2K8 1649 aaKnown RBP17.28■□□□□ 0.36
SERPINA3-208ENST00000556968 PZPP20742 1482 aa17.27■□□□□ 0.36
SERPINA3-208ENST00000556968 SHANK2Q9UPX8 1470 aa17.26■□□□□ 0.35
SERPINA3-208ENST00000556968 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
SERPINA3-208ENST00000556968 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
SERPINA3-208ENST00000556968 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
SERPINA3-208ENST00000556968 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
SERPINA3-208ENST00000556968 PLA2R1Q13018 1463 aa17.25■□□□□ 0.35
SERPINA3-208ENST00000556968 ABCC5O15440 1437 aa17.25■□□□□ 0.35
SERPINA3-208ENST00000556968 FBXO31Q5XUX0 539 aaPredicted RBP17.25■□□□□ 0.35
SERPINA3-208ENST00000556968 A2ML1A8K2U0 1454 aa17.24■□□□□ 0.35
SERPINA3-208ENST00000556968 TCOF1Q13428 1488 aaKnown RBP17.24■□□□□ 0.35
SERPINA3-208ENST00000556968 TNRQ92752 1358 aa17.24■□□□□ 0.35
SERPINA3-208ENST00000556968 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
SERPINA3-208ENST00000556968 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
SERPINA3-208ENST00000556968 PKD2Q13563 968 aa17.23■□□□□ 0.35
SERPINA3-208ENST00000556968 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
SERPINA3-208ENST00000556968 DAPK1P53355 1430 aa17.22■□□□□ 0.35
SERPINA3-208ENST00000556968 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
SERPINA3-208ENST00000556968 ABCC3O15438 1527 aa17.21■□□□□ 0.35
SERPINA3-208ENST00000556968 MROH1Q8NDA8 1641 aa17.21■□□□□ 0.35
SERPINA3-208ENST00000556968 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
SERPINA3-208ENST00000556968 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
SERPINA3-208ENST00000556968 NLRP1Q9C000 1473 aa17.18■□□□□ 0.34
SERPINA3-208ENST00000556968 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
SERPINA3-208ENST00000556968 ANKRD30AQ9BXX3 1397 aa17.16■□□□□ 0.34
SERPINA3-208ENST00000556968 PRDM15P57071 1507 aaPredicted RBP17.16■□□□□ 0.34
SERPINA3-208ENST00000556968 CEP152O94986 1710 aa17.16■□□□□ 0.34
SERPINA3-208ENST00000556968 SPATA31D1Q6ZQQ2 1576 aa17.15■□□□□ 0.34
SERPINA3-208ENST00000556968 THEMISQ8N1K5 641 aaPredicted RBP17.15■□□□□ 0.34
SERPINA3-208ENST00000556968 CHIC2Q9UKJ5 165 aa17.14■□□□□ 0.33
SERPINA3-208ENST00000556968 UGGT1Q9NYU2 1555 aa17.14■□□□□ 0.33
SERPINA3-208ENST00000556968 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
SERPINA3-208ENST00000556968 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
SERPINA3-208ENST00000556968 ERVK-7P63135 1459 aa17.13■□□□□ 0.33
SERPINA3-208ENST00000556968 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
SERPINA3-208ENST00000556968 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
SERPINA3-208ENST00000556968 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
SERPINA3-208ENST00000556968 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
SERPINA3-208ENST00000556968 ANKLE2Q86XL3 938 aa17.11■□□□□ 0.33
SERPINA3-208ENST00000556968 ZNF335Q9H4Z2 1342 aaPredicted RBP17.11■□□□□ 0.33
SERPINA3-208ENST00000556968 KANK1Q14678 1352 aa17.11■□□□□ 0.33
SERPINA3-208ENST00000556968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
SERPINA3-208ENST00000556968 MSH5O43196 834 aa17.1■□□□□ 0.33
SERPINA3-208ENST00000556968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
SERPINA3-208ENST00000556968 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
SERPINA3-208ENST00000556968 CFAP65Q6ZU64 1925 aaKnown RBP17.07■□□□□ 0.32
SERPINA3-208ENST00000556968 MED14O60244 1454 aa17.06■□□□□ 0.32
SERPINA3-208ENST00000556968 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
SERPINA3-208ENST00000556968 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
SERPINA3-208ENST00000556968 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
SERPINA3-208ENST00000556968 NPHP4O75161 1426 aaPredicted RBP17.03■□□□□ 0.32
SERPINA3-208ENST00000556968 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
SERPINA3-208ENST00000556968 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
SERPINA3-208ENST00000556968 CPS1P31327 1500 aa17.01■□□□□ 0.31
SERPINA3-208ENST00000556968 EFCAB6Q5THR3 1501 aa17■□□□□ 0.31
SERPINA3-208ENST00000556968 ROCK1Q13464 1354 aa16.99■□□□□ 0.31
SERPINA3-208ENST00000556968 SLIT1O75093 1534 aa16.98■□□□□ 0.31
SERPINA3-208ENST00000556968 PIK3C2BO00750 1634 aa16.98■□□□□ 0.31
SERPINA3-208ENST00000556968 SCAF11Q99590 1463 aaKnown RBP16.98■□□□□ 0.31
SERPINA3-208ENST00000556968 ARHGAP23Q9P227 1491 aa16.98■□□□□ 0.31
SERPINA3-208ENST00000556968 KDM5AP29375 1690 aaKnown RBP16.97■□□□□ 0.31
SERPINA3-208ENST00000556968 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
SERPINA3-208ENST00000556968 NOS1P29475 1434 aa16.96■□□□□ 0.31
SERPINA3-208ENST00000556968 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
SERPINA3-208ENST00000556968 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
SERPINA3-208ENST00000556968 SYNMO15061 1565 aa16.96■□□□□ 0.31
SERPINA3-208ENST00000556968 IDI1Q13907 227 aa16.95■□□□□ 0.3
SERPINA3-208ENST00000556968 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
SERPINA3-208ENST00000556968 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
SERPINA3-208ENST00000556968 EID1Q9Y6B2 187 aa16.95■□□□□ 0.3
SERPINA3-208ENST00000556968 UNC13BO14795 1591 aa16.94■□□□□ 0.3
SERPINA3-208ENST00000556968 LTKP29376 864 aa16.94■□□□□ 0.3
SERPINA3-208ENST00000556968 TET3O43151 1660 aa16.94■□□□□ 0.3
SERPINA3-208ENST00000556968 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
SERPINA3-208ENST00000556968 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
SERPINA3-208ENST00000556968 ITGAEP38570 1179 aa16.91■□□□□ 0.3
SERPINA3-208ENST00000556968 GCC2Q8IWJ2 1684 aa16.91■□□□□ 0.3
SERPINA3-208ENST00000556968 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
SERPINA3-208ENST00000556968 STRCP1A6NGW2 1772 aa16.89■□□□□ 0.3
SERPINA3-208ENST00000556968 TOM1O60784 492 aa16.89■□□□□ 0.29
SERPINA3-208ENST00000556968 IQGAP3Q86VI3 1631 aa16.88■□□□□ 0.29
SERPINA3-208ENST00000556968 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
SERPINA3-208ENST00000556968 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
SERPINA3-208ENST00000556968 E9PCH4 1651 aa16.85■□□□□ 0.29
SERPINA3-208ENST00000556968 NUP155O75694 1391 aa16.85■□□□□ 0.29
SERPINA3-208ENST00000556968 PIP4K2BP78356 416 aa16.83■□□□□ 0.28
SERPINA3-208ENST00000556968 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
SERPINA3-208ENST00000556968 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms