RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
CNOT10-219ENST00000556853 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
CNOT10-219ENST00000556853 CDC42BPAQ5VT25 1732 aa20.64■□□□□ 0.89
CNOT10-219ENST00000556853 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
CNOT10-219ENST00000556853 SYCP2Q9BX26 1530 aa20.63■□□□□ 0.89
CNOT10-219ENST00000556853 LRRIQ1Q96JM4 1722 aa20.63■□□□□ 0.89
CNOT10-219ENST00000556853 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
CNOT10-219ENST00000556853 FAM135AQ9P2D6 1515 aa20.61■□□□□ 0.89
CNOT10-219ENST00000556853 XIRP1Q702N8 1843 aaKnown RBP20.6■□□□□ 0.89
CNOT10-219ENST00000556853 HNRNPMP52272 730 aaKnown RBP eCLIP20.6■□□□□ 0.89
CNOT10-219ENST00000556853 PZPP20742 1482 aa20.6■□□□□ 0.89
CNOT10-219ENST00000556853 NLRP1Q9C000 1473 aa20.59■□□□□ 0.89
CNOT10-219ENST00000556853 ZNF777Q9ULD5 760 aaPredicted RBP20.59■□□□□ 0.89
CNOT10-219ENST00000556853 MIA2Q96PC5 1412 aa20.57■□□□□ 0.88
CNOT10-219ENST00000556853 ZC3H13Q5T200 1668 aaKnown RBP20.56■□□□□ 0.88
CNOT10-219ENST00000556853 ADGBQ8N7X0 1667 aa20.56■□□□□ 0.88
CNOT10-219ENST00000556853 KIAA1107Q9UPP5 1409 aa20.53■□□□□ 0.88
CNOT10-219ENST00000556853 ROBO1Q9Y6N7 1651 aa20.52■□□□□ 0.88
CNOT10-219ENST00000556853 TRIM52Q96A61 297 aa20.52■□□□□ 0.88
CNOT10-219ENST00000556853 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
CNOT10-219ENST00000556853 KDM5DQ9BY66 1539 aa20.49■□□□□ 0.87
CNOT10-219ENST00000556853 EEA1Q15075 1411 aa20.49■□□□□ 0.87
CNOT10-219ENST00000556853 SRCAPQ6ZRS2 3230 aa20.49■□□□□ 0.87
CNOT10-219ENST00000556853 GPATCH8Q9UKJ3 1502 aaKnown RBP20.48■□□□□ 0.87
CNOT10-219ENST00000556853 PLEKHH2Q8IVE3 1493 aa20.47■□□□□ 0.87
CNOT10-219ENST00000556853 JCADQ9P266 1359 aa20.46■□□□□ 0.87
CNOT10-219ENST00000556853 ZNF772Q68DY9 489 aaPredicted RBP20.46■□□□□ 0.87
CNOT10-219ENST00000556853 DHX29Q7Z478 1369 aaKnown RBP20.46■□□□□ 0.87
CNOT10-219ENST00000556853 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
CNOT10-219ENST00000556853 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
CNOT10-219ENST00000556853 KIF3BO15066 747 aa20.42■□□□□ 0.86
CNOT10-219ENST00000556853 SCAF11Q99590 1463 aaKnown RBP20.41■□□□□ 0.86
CNOT10-219ENST00000556853 LRP6O75581 1613 aa20.41■□□□□ 0.86
CNOT10-219ENST00000556853 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
CNOT10-219ENST00000556853 TMEM94Q12767 1356 aa20.4■□□□□ 0.86
CNOT10-219ENST00000556853 LRRC9Q6ZRR7 1453 aa20.4■□□□□ 0.86
CNOT10-219ENST00000556853 CDK12Q9NYV4 1490 aaPredicted RBP20.4■□□□□ 0.86
CNOT10-219ENST00000556853 RXRBP28702 533 aa20.39■□□□□ 0.85
CNOT10-219ENST00000556853 RTEL1-TNFRSF6BF6WH68 1400 aa20.38■□□□□ 0.85
CNOT10-219ENST00000556853 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
CNOT10-219ENST00000556853 MAP3K1Q13233 1512 aa20.37■□□□□ 0.85
CNOT10-219ENST00000556853 LTKP29376 864 aa20.36■□□□□ 0.85
CNOT10-219ENST00000556853 SPATA31A6Q5VVP1 1343 aa20.35■□□□□ 0.85
CNOT10-219ENST00000556853 MEX3CQ5U5Q3 659 aaKnown RBP20.35■□□□□ 0.85
CNOT10-219ENST00000556853 UBR1Q8IWV7 1749 aa20.35■□□□□ 0.85
CNOT10-219ENST00000556853 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
CNOT10-219ENST00000556853 CASKIN1Q8WXD9 1431 aa20.34■□□□□ 0.85
CNOT10-219ENST00000556853 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
CNOT10-219ENST00000556853 COL16A1Q07092 1604 aaPredicted RBP20.33■□□□□ 0.84
CNOT10-219ENST00000556853 MBD5Q9P267 1494 aa20.32■□□□□ 0.84
CNOT10-219ENST00000556853 SLIT1O75093 1534 aa20.32■□□□□ 0.84
CNOT10-219ENST00000556853 NCOA2Q15596 1464 aa20.31■□□□□ 0.84
CNOT10-219ENST00000556853 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
CNOT10-219ENST00000556853 UBTFP17480 764 aaKnown RBP20.29■□□□□ 0.84
CNOT10-219ENST00000556853 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
CNOT10-219ENST00000556853 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
CNOT10-219ENST00000556853 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
CNOT10-219ENST00000556853 KCNA6P17658 529 aa20.28■□□□□ 0.84
CNOT10-219ENST00000556853 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
CNOT10-219ENST00000556853 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
CNOT10-219ENST00000556853 ZNF644Q9H582 1327 aaPredicted RBP20.27■□□□□ 0.84
CNOT10-219ENST00000556853 PRDM15P57071 1507 aaPredicted RBP20.26■□□□□ 0.83
CNOT10-219ENST00000556853 ZRANB1Q9UGI0 708 aa20.25■□□□□ 0.83
CNOT10-219ENST00000556853 SETBP1Q9Y6X0 1596 aa20.25■□□□□ 0.83
CNOT10-219ENST00000556853 EID1Q9Y6B2 187 aa20.24■□□□□ 0.83
CNOT10-219ENST00000556853 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
CNOT10-219ENST00000556853 MSH6P52701 1360 aa20.23■□□□□ 0.83
CNOT10-219ENST00000556853 RGS12O14924 1447 aa20.23■□□□□ 0.83
CNOT10-219ENST00000556853 SHPRHQ149N8 1683 aa20.22■□□□□ 0.83
CNOT10-219ENST00000556853 ABCC3O15438 1527 aa20.22■□□□□ 0.83
CNOT10-219ENST00000556853 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
CNOT10-219ENST00000556853 FOXD1Q16676 465 aa20.21■□□□□ 0.83
CNOT10-219ENST00000556853 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
CNOT10-219ENST00000556853 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
CNOT10-219ENST00000556853 AFF2P51816 1311 aa20.18■□□□□ 0.82
CNOT10-219ENST00000556853 FYCO1Q9BQS8 1478 aa20.18■□□□□ 0.82
CNOT10-219ENST00000556853 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
CNOT10-219ENST00000556853 NUTM2BA6NNL0 878 aaPredicted RBP20.17■□□□□ 0.82
CNOT10-219ENST00000556853 NUTM2EB1AL46 878 aaPredicted RBP20.17■□□□□ 0.82
CNOT10-219ENST00000556853 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
CNOT10-219ENST00000556853 NUTM2AQ8IVF1 878 aaPredicted RBP20.17■□□□□ 0.82
CNOT10-219ENST00000556853 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
CNOT10-219ENST00000556853 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
CNOT10-219ENST00000556853 TET3O43151 1660 aa20.16■□□□□ 0.82
CNOT10-219ENST00000556853 RBM6P78332 1123 aaKnown RBP20.15■□□□□ 0.82
CNOT10-219ENST00000556853 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
CNOT10-219ENST00000556853 CAMSAP2Q08AD1 1489 aa20.14■□□□□ 0.81
CNOT10-219ENST00000556853 CCDC141Q6ZP82 1450 aa20.14■□□□□ 0.81
CNOT10-219ENST00000556853 SLC26A8Q96RN1 970 aa20.14■□□□□ 0.81
CNOT10-219ENST00000556853 KDM5AP29375 1690 aaKnown RBP20.13■□□□□ 0.81
CNOT10-219ENST00000556853 ATAD2Q6PL18 1390 aa20.12■□□□□ 0.81
CNOT10-219ENST00000556853 QTRT2Q9H974 415 aaKnown RBP20.12■□□□□ 0.81
CNOT10-219ENST00000556853 DIP2AQ14689 1571 aa20.1■□□□□ 0.81
CNOT10-219ENST00000556853 PIK3C2BO00750 1634 aa20.09■□□□□ 0.81
CNOT10-219ENST00000556853 CEP152O94986 1710 aa20.08■□□□□ 0.81
CNOT10-219ENST00000556853 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.81
CNOT10-219ENST00000556853 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
CNOT10-219ENST00000556853 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
CNOT10-219ENST00000556853 ARHGAP31Q2M1Z3 1444 aa20.03■□□□□ 0.8
CNOT10-219ENST00000556853 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms