RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
PRKCH-222ENST00000556778 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
PRKCH-222ENST00000556778 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
PRKCH-222ENST00000556778 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-222ENST00000556778 RTEL1-TNFRSF6BF6WH68 1400 aa13.52□□□□□ -0.25
PRKCH-222ENST00000556778 DAPK1P53355 1430 aa13.52□□□□□ -0.25
PRKCH-222ENST00000556778 ATP7AQ04656 1500 aa13.52□□□□□ -0.25
PRKCH-222ENST00000556778 ABCA6Q8N139 1617 aa13.52□□□□□ -0.25
PRKCH-222ENST00000556778 PTPN23Q9H3S7 1636 aa13.52□□□□□ -0.25
PRKCH-222ENST00000556778 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
PRKCH-222ENST00000556778 GGT6Q6P531 493 aa13.51□□□□□ -0.25
PRKCH-222ENST00000556778 A2MP01023 1474 aa13.5□□□□□ -0.25
PRKCH-222ENST00000556778 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
PRKCH-222ENST00000556778 CEBPAP49715 358 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-222ENST00000556778 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
PRKCH-222ENST00000556778 KIF3BO15066 747 aa13.49□□□□□ -0.25
PRKCH-222ENST00000556778 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
PRKCH-222ENST00000556778 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
PRKCH-222ENST00000556778 KIF15Q9NS87 1388 aa13.45□□□□□ -0.26
PRKCH-222ENST00000556778 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
PRKCH-222ENST00000556778 AGLP35573 1532 aa13.44□□□□□ -0.26
PRKCH-222ENST00000556778 PTPRMP28827 1452 aa13.43□□□□□ -0.26
PRKCH-222ENST00000556778 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
PRKCH-222ENST00000556778 REREQ9P2R6 1566 aa13.42□□□□□ -0.26
PRKCH-222ENST00000556778 ADAMTSL3P82987 1691 aa13.42□□□□□ -0.26
PRKCH-222ENST00000556778 ANKRD30AQ9BXX3 1397 aa13.42□□□□□ -0.26
PRKCH-222ENST00000556778 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
PRKCH-222ENST00000556778 BCORL1Q5H9F3 1711 aa13.42□□□□□ -0.26
PRKCH-222ENST00000556778 PLXNC1O60486 1568 aa13.41□□□□□ -0.26
PRKCH-222ENST00000556778 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
PRKCH-222ENST00000556778 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
PRKCH-222ENST00000556778 MADDQ8WXG6 1647 aa13.41□□□□□ -0.26
PRKCH-222ENST00000556778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRKCH-222ENST00000556778 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
PRKCH-222ENST00000556778 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
PRKCH-222ENST00000556778 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
PRKCH-222ENST00000556778 FBXO31Q5XUX0 539 aaPredicted RBP13.38□□□□□ -0.27
PRKCH-222ENST00000556778 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
PRKCH-222ENST00000556778 DUOX2Q9NRD8 1548 aa13.36□□□□□ -0.27
PRKCH-222ENST00000556778 ADGBQ8N7X0 1667 aa13.36□□□□□ -0.27
PRKCH-222ENST00000556778 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
PRKCH-222ENST00000556778 ANKRD50Q9ULJ7 1429 aa13.34□□□□□ -0.27
PRKCH-222ENST00000556778 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
PRKCH-222ENST00000556778 ERBINQ96RT1 1412 aa13.33□□□□□ -0.28
PRKCH-222ENST00000556778 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
PRKCH-222ENST00000556778 HSPA2P54652 639 aa13.32□□□□□ -0.28
PRKCH-222ENST00000556778 NAIPQ13075 1403 aa13.3□□□□□ -0.28
PRKCH-222ENST00000556778 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
PRKCH-222ENST00000556778 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
PRKCH-222ENST00000556778 ABCC3O15438 1527 aa13.27□□□□□ -0.29
PRKCH-222ENST00000556778 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.29
PRKCH-222ENST00000556778 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
PRKCH-222ENST00000556778 NUP155O75694 1391 aa13.26□□□□□ -0.29
PRKCH-222ENST00000556778 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
PRKCH-222ENST00000556778 CLTCQ00610 1675 aaKnown RBP13.26□□□□□ -0.29
PRKCH-222ENST00000556778 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
PRKCH-222ENST00000556778 KDM5DQ9BY66 1539 aa13.25□□□□□ -0.29
PRKCH-222ENST00000556778 KANK1Q14678 1352 aa13.25□□□□□ -0.29
PRKCH-222ENST00000556778 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
PRKCH-222ENST00000556778 LMTK3Q96Q04 1460 aa13.24□□□□□ -0.29
PRKCH-222ENST00000556778 HFM1A2PYH4 1435 aa13.24□□□□□ -0.29
PRKCH-222ENST00000556778 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
PRKCH-222ENST00000556778 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
PRKCH-222ENST00000556778 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
PRKCH-222ENST00000556778 NPATQ14207 1427 aa13.22□□□□□ -0.29
PRKCH-222ENST00000556778 C3P01024 1663 aa13.22□□□□□ -0.29
PRKCH-222ENST00000556778 PRDM15P57071 1507 aaPredicted RBP13.22□□□□□ -0.29
PRKCH-222ENST00000556778 PZPP20742 1482 aa13.22□□□□□ -0.29
PRKCH-222ENST00000556778 TNRQ92752 1358 aa13.21□□□□□ -0.29
PRKCH-222ENST00000556778 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
PRKCH-222ENST00000556778 DEPDC5O75140 1603 aa13.19□□□□□ -0.3
PRKCH-222ENST00000556778 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
PRKCH-222ENST00000556778 IDI1Q13907 227 aa13.18□□□□□ -0.3
PRKCH-222ENST00000556778 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
PRKCH-222ENST00000556778 ARHGAP31Q2M1Z3 1444 aa13.18□□□□□ -0.3
PRKCH-222ENST00000556778 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
PRKCH-222ENST00000556778 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
PRKCH-222ENST00000556778 ERVK-7P63135 1459 aa13.17□□□□□ -0.3
PRKCH-222ENST00000556778 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
PRKCH-222ENST00000556778 NCKAP5LQ9HCH0 1330 aa13.16□□□□□ -0.3
PRKCH-222ENST00000556778 MROH2AA6NES4 1674 aa13.16□□□□□ -0.3
PRKCH-222ENST00000556778 PKD2Q13563 968 aa13.16□□□□□ -0.3
PRKCH-222ENST00000556778 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
PRKCH-222ENST00000556778 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
PRKCH-222ENST00000556778 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-222ENST00000556778 CEP152O94986 1710 aa13.15□□□□□ -0.3
PRKCH-222ENST00000556778 UNC13BO14795 1591 aa13.15□□□□□ -0.3
PRKCH-222ENST00000556778 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
PRKCH-222ENST00000556778 NOS1P29475 1434 aa13.13□□□□□ -0.31
PRKCH-222ENST00000556778 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
PRKCH-222ENST00000556778 SPATA31D1Q6ZQQ2 1576 aa13.12□□□□□ -0.31
PRKCH-222ENST00000556778 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-222ENST00000556778 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
PRKCH-222ENST00000556778 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
PRKCH-222ENST00000556778 THEMISQ8N1K5 641 aaPredicted RBP13.11□□□□□ -0.31
PRKCH-222ENST00000556778 ZC3H13Q5T200 1668 aaKnown RBP13.11□□□□□ -0.31
PRKCH-222ENST00000556778 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
PRKCH-222ENST00000556778 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
PRKCH-222ENST00000556778 UGGT1Q9NYU2 1555 aa13.1□□□□□ -0.31
PRKCH-222ENST00000556778 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms