RNA–Protein interactions for RNA: ENST00000556687.5

RBM23-222, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 1,124 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-222	ENST00000556687	PPARGC1B	Q86YN6	1023 aa	Known RBP	18.99	■□□□□ 0.63
RBM23-222	ENST00000556687	DNMT1	P26358	1616 aa	Known RBP	18.99	■□□□□ 0.63
RBM23-222	ENST00000556687	RRP7BP	Q9NSQ0	103 aa		18.98	■□□□□ 0.63
RBM23-222	ENST00000556687	CHIC2	Q9UKJ5	165 aa		18.98	■□□□□ 0.63
RBM23-222	ENST00000556687	WASHC2C	Q9Y4E1	1318 aa		18.98	■□□□□ 0.63
RBM23-222	ENST00000556687	SHANK2	Q9UPX8	1470 aa		18.97	■□□□□ 0.63
RBM23-222	ENST00000556687	STRC	Q7RTU9	1775 aa		18.96	■□□□□ 0.63
RBM23-222	ENST00000556687	FAM50A	Q14320	339 aa	Known RBP	18.96	■□□□□ 0.63
RBM23-222	ENST00000556687	FBXO31	Q5XUX0	539 aa	Predicted RBP	18.96	■□□□□ 0.63
RBM23-222	ENST00000556687	KDM5D	Q9BY66	1539 aa		18.95	■□□□□ 0.62
RBM23-222	ENST00000556687	DUOX2	Q9NRD8	1548 aa		18.95	■□□□□ 0.62
RBM23-222	ENST00000556687	KIF15	Q9NS87	1388 aa		18.94	■□□□□ 0.62
RBM23-222	ENST00000556687	RNF17	Q9BXT8	1623 aa	Known RBP	18.93	■□□□□ 0.62
RBM23-222	ENST00000556687	EIF2AK4	Q9P2K8	1649 aa	Known RBP	18.93	■□□□□ 0.62
RBM23-222	ENST00000556687	ILDR1	Q86SU0	546 aa	Predicted RBP	18.93	■□□□□ 0.62
RBM23-222	ENST00000556687	FAM135A	Q9P2D6	1515 aa		18.91	■□□□□ 0.62
RBM23-222	ENST00000556687	MROH1	Q8NDA8	1641 aa		18.91	■□□□□ 0.62
RBM23-222	ENST00000556687	MYO3A	Q8NEV4	1616 aa		18.91	■□□□□ 0.62
RBM23-222	ENST00000556687	PZP	P20742	1482 aa		18.9	■□□□□ 0.62
RBM23-222	ENST00000556687	ANKRD30A	Q9BXX3	1397 aa		18.89	■□□□□ 0.61
RBM23-222	ENST00000556687	NCOA1	Q15788	1441 aa		18.89	■□□□□ 0.61
RBM23-222	ENST00000556687	ABCC3	O15438	1527 aa		18.88	■□□□□ 0.61
RBM23-222	ENST00000556687	CAMSAP1	Q5T5Y3	1602 aa		18.87	■□□□□ 0.61
RBM23-222	ENST00000556687	TNR	Q92752	1358 aa		18.87	■□□□□ 0.61
RBM23-222	ENST00000556687	ERBIN	Q96RT1	1412 aa		18.87	■□□□□ 0.61
RBM23-222	ENST00000556687	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	18.87	■□□□□ 0.61
RBM23-222	ENST00000556687	DMRT2	Q9Y5R5	561 aa		18.87	■□□□□ 0.61
RBM23-222	ENST00000556687	CEP152	O94986	1710 aa		18.86	■□□□□ 0.61
RBM23-222	ENST00000556687	ZNF142	P52746	1687 aa	Predicted RBP	18.86	■□□□□ 0.61
RBM23-222	ENST00000556687	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
RBM23-222	ENST00000556687	CFAP65	Q6ZU64	1925 aa	Known RBP	18.86	■□□□□ 0.61
RBM23-222	ENST00000556687	NCKAP5L	Q9HCH0	1330 aa		18.85	■□□□□ 0.61
RBM23-222	ENST00000556687	ZC3H13	Q5T200	1668 aa	Known RBP	18.85	■□□□□ 0.61
RBM23-222	ENST00000556687	ADGRL2	O95490	1459 aa		18.84	■□□□□ 0.61
RBM23-222	ENST00000556687	POTED	Q86YR6	584 aa		18.84	■□□□□ 0.61
RBM23-222	ENST00000556687	A2ML1	A8K2U0	1454 aa		18.84	■□□□□ 0.61
RBM23-222	ENST00000556687	PTPRT	O14522	1441 aa		18.83	■□□□□ 0.6
RBM23-222	ENST00000556687	PRDM15	P57071	1507 aa	Predicted RBP	18.81	■□□□□ 0.6
RBM23-222	ENST00000556687	DEPDC5	O75140	1603 aa		18.81	■□□□□ 0.6
RBM23-222	ENST00000556687	ITGAE	P38570	1179 aa		18.79	■□□□□ 0.6
RBM23-222	ENST00000556687	PLA2R1	Q13018	1463 aa		18.78	■□□□□ 0.6
RBM23-222	ENST00000556687	CERK	Q8TCT0	537 aa		18.78	■□□□□ 0.6
RBM23-222	ENST00000556687	FBXO41	Q8TF61	875 aa		18.78	■□□□□ 0.6
RBM23-222	ENST00000556687	KANK1	Q14678	1352 aa		18.78	■□□□□ 0.6
RBM23-222	ENST00000556687	ERVK-7	P63135	1459 aa		18.77	■□□□□ 0.6
RBM23-222	ENST00000556687	SPATA31D1	Q6ZQQ2	1576 aa		18.77	■□□□□ 0.6
RBM23-222	ENST00000556687	ANKRD50	Q9ULJ7	1429 aa		18.76	■□□□□ 0.59
RBM23-222	ENST00000556687	PKD2	Q13563	968 aa		18.76	■□□□□ 0.59
RBM23-222	ENST00000556687	NLRP1	Q9C000	1473 aa		18.76	■□□□□ 0.59
RBM23-222	ENST00000556687	ARHGAP31	Q2M1Z3	1444 aa		18.75	■□□□□ 0.59
RBM23-222	ENST00000556687	VWDE	Q8N2E2	1590 aa		18.74	■□□□□ 0.59
RBM23-222	ENST00000556687	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
RBM23-222	ENST00000556687	THEMIS	Q8N1K5	641 aa	Predicted RBP	18.74	■□□□□ 0.59
RBM23-222	ENST00000556687	UGGT1	Q9NYU2	1555 aa		18.73	■□□□□ 0.59
RBM23-222	ENST00000556687	ROCK1	Q13464	1354 aa		18.72	■□□□□ 0.59
RBM23-222	ENST00000556687	LMTK2	Q8IWU2	1503 aa		18.71	■□□□□ 0.59
RBM23-222	ENST00000556687	RRBP1	Q9P2E9	1410 aa	Known RBP	18.69	■□□□□ 0.58
RBM23-222	ENST00000556687	ANKLE2	Q86XL3	938 aa		18.69	■□□□□ 0.58
RBM23-222	ENST00000556687	LTBP4	Q8N2S1	1624 aa		18.69	■□□□□ 0.58
RBM23-222	ENST00000556687	POLR1A	O95602	1720 aa	Predicted RBP	18.68	■□□□□ 0.58
RBM23-222	ENST00000556687	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	18.68	■□□□□ 0.58
RBM23-222	ENST00000556687	NEURL4	Q96JN8	1562 aa		18.68	■□□□□ 0.58
RBM23-222	ENST00000556687	UBR1	Q8IWV7	1749 aa		18.66	■□□□□ 0.58
RBM23-222	ENST00000556687	EFCAB6	Q5THR3	1501 aa		18.65	■□□□□ 0.58
RBM23-222	ENST00000556687	UNC13B	O14795	1591 aa		18.64	■□□□□ 0.58
RBM23-222	ENST00000556687	IDI1	Q13907	227 aa		18.64	■□□□□ 0.57
RBM23-222	ENST00000556687	NOS1	P29475	1434 aa		18.63	■□□□□ 0.57
RBM23-222	ENST00000556687	SYNM	O15061	1565 aa		18.63	■□□□□ 0.57
RBM23-222	ENST00000556687	PIK3C2B	O00750	1634 aa		18.63	■□□□□ 0.57
RBM23-222	ENST00000556687	TET3	O43151	1660 aa		18.61	■□□□□ 0.57
RBM23-222	ENST00000556687	NPHP4	O75161	1426 aa	Predicted RBP	18.61	■□□□□ 0.57
RBM23-222	ENST00000556687	MED14	O60244	1454 aa		18.6	■□□□□ 0.57
RBM23-222	ENST00000556687	LTK	P29376	864 aa		18.6	■□□□□ 0.57
RBM23-222	ENST00000556687	NUP155	O75694	1391 aa		18.59	■□□□□ 0.57
RBM23-222	ENST00000556687	STAG3	Q9UJ98	1225 aa		18.59	■□□□□ 0.57
RBM23-222	ENST00000556687	GCC2	Q8IWJ2	1684 aa		18.58	■□□□□ 0.57
RBM23-222	ENST00000556687	TXNDC2	Q86VQ3	553 aa		18.58	■□□□□ 0.56
RBM23-222	ENST00000556687	RPRD2	Q5VT52	1461 aa	Known RBP	18.58	■□□□□ 0.56
RBM23-222	ENST00000556687	ARHGAP23	Q9P227	1491 aa		18.58	■□□□□ 0.56
RBM23-222	ENST00000556687	IQGAP3	Q86VI3	1631 aa		18.57	■□□□□ 0.56
RBM23-222	ENST00000556687	SLIT1	O75093	1534 aa		18.57	■□□□□ 0.56
RBM23-222	ENST00000556687		E9PCH4	1651 aa		18.57	■□□□□ 0.56
RBM23-222	ENST00000556687	IQGAP1	P46940	1657 aa		18.57	■□□□□ 0.56
RBM23-222	ENST00000556687	SLC52A1	Q9NWF4	448 aa		18.56	■□□□□ 0.56
RBM23-222	ENST00000556687	SCAF11	Q99590	1463 aa	Known RBP	18.55	■□□□□ 0.56
RBM23-222	ENST00000556687	NAIP	Q13075	1403 aa		18.55	■□□□□ 0.56
RBM23-222	ENST00000556687	TMEM2	Q9UHN6	1383 aa		18.55	■□□□□ 0.56
RBM23-222	ENST00000556687	EID1	Q9Y6B2	187 aa		18.53	■□□□□ 0.56
RBM23-222	ENST00000556687	KDM5A	P29375	1690 aa	Known RBP	18.53	■□□□□ 0.56
RBM23-222	ENST00000556687	IQSEC2	Q5JU85	1478 aa		18.52	■□□□□ 0.56
RBM23-222	ENST00000556687	ADGRB3	O60242	1522 aa		18.51	■□□□□ 0.55
RBM23-222	ENST00000556687	MYO5B	Q9ULV0	1848 aa		18.51	■□□□□ 0.55
RBM23-222	ENST00000556687	STRCP1	A6NGW2	1772 aa		18.49	■□□□□ 0.55
RBM23-222	ENST00000556687	CHGA	P10645	457 aa	Known RBP	18.48	■□□□□ 0.55
RBM23-222	ENST00000556687	CPS1	P31327	1500 aa		18.48	■□□□□ 0.55
RBM23-222	ENST00000556687	HFM1	A2PYH4	1435 aa		18.48	■□□□□ 0.55
RBM23-222	ENST00000556687	UBAP1L	F5GYI3	381 aa		18.47	■□□□□ 0.55
RBM23-222	ENST00000556687	TMEM131L	A2VDJ0	1609 aa		18.47	■□□□□ 0.55
RBM23-222	ENST00000556687	MSH5	O43196	834 aa		18.45	■□□□□ 0.54
RBM23-222	ENST00000556687	TRIM52	Q96A61	297 aa		18.45	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms