RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 NUTM2EB1AL46 878 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-242ENST00000556644 NUTM2DQ5VT03 806 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-242ENST00000556644 FBXO31Q5XUX0 539 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-242ENST00000556644 GGT6Q6P531 493 aa7.44□□□□□ -1.22
ATXN3-242ENST00000556644 NUTM2AQ8IVF1 878 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-242ENST00000556644 KIF14Q15058 1648 aa7.44□□□□□ -1.22
ATXN3-242ENST00000556644 TNRQ92752 1358 aa7.44□□□□□ -1.22
ATXN3-242ENST00000556644 JCADQ9P266 1359 aa7.43□□□□□ -1.22
ATXN3-242ENST00000556644 XIRP1Q702N8 1843 aaKnown RBP7.43□□□□□ -1.22
ATXN3-242ENST00000556644 RGS12O14924 1447 aa7.43□□□□□ -1.22
ATXN3-242ENST00000556644 MED14O60244 1454 aa7.42□□□□□ -1.22
ATXN3-242ENST00000556644 CDK12Q9NYV4 1490 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-242ENST00000556644 PHLPP1O60346 1717 aa7.41□□□□□ -1.22
ATXN3-242ENST00000556644 ATP1B4Q9UN42 357 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-242ENST00000556644 PRXQ9BXM0 1461 aa7.4□□□□□ -1.22
ATXN3-242ENST00000556644 DEPDC5O75140 1603 aa7.4□□□□□ -1.22
ATXN3-242ENST00000556644 POTEHQ6S545 545 aa7.39□□□□□ -1.23
ATXN3-242ENST00000556644 THEMISQ8N1K5 641 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-242ENST00000556644 UGGT1Q9NYU2 1555 aa7.38□□□□□ -1.23
ATXN3-242ENST00000556644 FAM135AQ9P2D6 1515 aa7.38□□□□□ -1.23
ATXN3-242ENST00000556644 TMEM94Q12767 1356 aa7.38□□□□□ -1.23
ATXN3-242ENST00000556644 AFF2P51816 1311 aa7.38□□□□□ -1.23
ATXN3-242ENST00000556644 SAMD9LQ8IVG5 1584 aa7.37□□□□□ -1.23
ATXN3-242ENST00000556644 CDC42BPBQ9Y5S2 1711 aa7.37□□□□□ -1.23
ATXN3-242ENST00000556644 ZC3H13Q5T200 1668 aaKnown RBP7.37□□□□□ -1.23
ATXN3-242ENST00000556644 COL16A1Q07092 1604 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-242ENST00000556644 PLXNC1O60486 1568 aa7.37□□□□□ -1.23
ATXN3-242ENST00000556644 A2MP01023 1474 aa7.36□□□□□ -1.23
ATXN3-242ENST00000556644 ATAD2Q6PL18 1390 aa7.36□□□□□ -1.23
ATXN3-242ENST00000556644 SPAG9O60271 1321 aaKnown RBP7.36□□□□□ -1.23
ATXN3-242ENST00000556644 SPATA31A6Q5VVP1 1343 aa7.36□□□□□ -1.23
ATXN3-242ENST00000556644 YY1P25490 414 aa7.36□□□□□ -1.23
ATXN3-242ENST00000556644 ZNF777Q9ULD5 760 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-242ENST00000556644 MAP3K1Q13233 1512 aa7.35□□□□□ -1.23
ATXN3-242ENST00000556644 LRRC9Q6ZRR7 1453 aa7.35□□□□□ -1.23
ATXN3-242ENST00000556644 LRP5O75197 1615 aa7.34□□□□□ -1.23
ATXN3-242ENST00000556644 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
ATXN3-242ENST00000556644 KDM5DQ9BY66 1539 aa7.34□□□□□ -1.23
ATXN3-242ENST00000556644 PZPP20742 1482 aa7.34□□□□□ -1.23
ATXN3-242ENST00000556644 PREX2Q70Z35 1606 aa7.34□□□□□ -1.24
ATXN3-242ENST00000556644 SYCP2Q9BX26 1530 aa7.33□□□□□ -1.24
ATXN3-242ENST00000556644 NLRP1Q9C000 1473 aa7.33□□□□□ -1.24
ATXN3-242ENST00000556644 RBM6P78332 1123 aaKnown RBP7.33□□□□□ -1.24
ATXN3-242ENST00000556644 QTRT2Q9H974 415 aaKnown RBP7.33□□□□□ -1.24
ATXN3-242ENST00000556644 TROQ12816 1431 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-242ENST00000556644 MIA2Q96PC5 1412 aa7.33□□□□□ -1.24
ATXN3-242ENST00000556644 SENP3-EIF4A1A0A087X0R7 540 aa7.32□□□□□ -1.24
ATXN3-242ENST00000556644 HNRNPMP52272 730 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATXN3-242ENST00000556644 PROSER2Q86WR7 435 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-242ENST00000556644 C8orf37Q96NL8 207 aa7.32□□□□□ -1.24
ATXN3-242ENST00000556644 SLAIN2Q9P270 581 aa7.32□□□□□ -1.24
ATXN3-242ENST00000556644 SCAF11Q99590 1463 aaKnown RBP7.31□□□□□ -1.24
ATXN3-242ENST00000556644 PSDA5PKW4 1024 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-242ENST00000556644 LTKP29376 864 aa7.31□□□□□ -1.24
ATXN3-242ENST00000556644 CLIP1P30622 1438 aa7.31□□□□□ -1.24
ATXN3-242ENST00000556644 FGD6Q6ZV73 1430 aa7.31□□□□□ -1.24
ATXN3-242ENST00000556644 INO80Q9ULG1 1556 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-242ENST00000556644 CDK11AQ9UQ88 783 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-242ENST00000556644 SHPRHQ149N8 1683 aa7.3□□□□□ -1.24
ATXN3-242ENST00000556644 MSH6P52701 1360 aa7.3□□□□□ -1.24
ATXN3-242ENST00000556644 TIAM1Q13009 1591 aa7.29□□□□□ -1.24
ATXN3-242ENST00000556644 DEFB132Q7Z7B7 95 aa7.29□□□□□ -1.24
ATXN3-242ENST00000556644 TXNDC2Q86VQ3 553 aa7.29□□□□□ -1.24
ATXN3-242ENST00000556644 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.24
ATXN3-242ENST00000556644 KIF3BO15066 747 aa7.27□□□□□ -1.25
ATXN3-242ENST00000556644 NCOA2Q15596 1464 aa7.27□□□□□ -1.25
ATXN3-242ENST00000556644 CDC42BPAQ5VT25 1732 aa7.27□□□□□ -1.25
ATXN3-242ENST00000556644 PRDM15P57071 1507 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-242ENST00000556644 KCNA6P17658 529 aa7.26□□□□□ -1.25
ATXN3-242ENST00000556644 HRCP23327 699 aa7.26□□□□□ -1.25
ATXN3-242ENST00000556644 MAPK8IP2Q13387 824 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-242ENST00000556644 NGLY1Q96IV0 654 aa7.26□□□□□ -1.25
ATXN3-242ENST00000556644 SLC26A8Q96RN1 970 aa7.26□□□□□ -1.25
ATXN3-242ENST00000556644 NHSL1Q5SYE7 1610 aa7.26□□□□□ -1.25
ATXN3-242ENST00000556644 ADGBQ8N7X0 1667 aa7.25□□□□□ -1.25
ATXN3-242ENST00000556644 DIP2AQ14689 1571 aa7.25□□□□□ -1.25
ATXN3-242ENST00000556644 NWD1Q149M9 1564 aa7.25□□□□□ -1.25
ATXN3-242ENST00000556644 UBR1Q8IWV7 1749 aa7.25□□□□□ -1.25
ATXN3-242ENST00000556644 ADAMTS2O95450 1211 aa7.25□□□□□ -1.25
ATXN3-242ENST00000556644 AHDC1Q5TGY3 1603 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-242ENST00000556644 EP400Q96L91 3159 aa7.24□□□□□ -1.25
ATXN3-242ENST00000556644 EHMT2Q96KQ7 1210 aa7.24□□□□□ -1.25
ATXN3-242ENST00000556644 KDM5AP29375 1690 aaKnown RBP7.24□□□□□ -1.25
ATXN3-242ENST00000556644 ARHGAP23Q9P227 1491 aa7.24□□□□□ -1.25
ATXN3-242ENST00000556644 C14orf37Q86TY3 774 aa7.23□□□□□ -1.25
ATXN3-242ENST00000556644 CCDC125Q86Z20 511 aa7.23□□□□□ -1.25
ATXN3-242ENST00000556644 EID1Q9Y6B2 187 aa7.23□□□□□ -1.25
ATXN3-242ENST00000556644 MAST1Q9Y2H9 1570 aa7.23□□□□□ -1.25
ATXN3-242ENST00000556644 LRRIQ1Q96JM4 1722 aa7.23□□□□□ -1.25
ATXN3-242ENST00000556644 NKTRP30414 1462 aaKnown RBP7.23□□□□□ -1.25
ATXN3-242ENST00000556644 ERVK-7P63135 1459 aa7.23□□□□□ -1.25
ATXN3-242ENST00000556644 SLIT1O75093 1534 aa7.22□□□□□ -1.25
ATXN3-242ENST00000556644 BCL9LQ86UU0 1499 aa7.22□□□□□ -1.25
ATXN3-242ENST00000556644 DHX29Q7Z478 1369 aaKnown RBP7.21□□□□□ -1.25
ATXN3-242ENST00000556644 BLMP54132 1417 aaPredicted RBP7.21□□□□□ -1.25
ATXN3-242ENST00000556644 USP21Q9UK80 565 aa7.21□□□□□ -1.26
ATXN3-242ENST00000556644 BRINP3Q76B58 766 aa7.2□□□□□ -1.26
ATXN3-242ENST00000556644 DDX17Q92841 729 aaKnown RBP7.2□□□□□ -1.26
ATXN3-242ENST00000556644 TRPC5Q9UL62 973 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-242ENST00000556644 ABCC3O15438 1527 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms